This platform represents an effort to synchronize phenotypic information for microbes. We have applied and collected various models, primarily Large Language Model (LLM) based, to predict phenotypes and compare these predictions to high-quality phenotypes documented in scientific literature or phenotyping studies. For each microbe, we've generated a "card" page that collects this information and illustrates how the predictions overlap with ground truth. Additionally, we provide model performance estimates for widely used public LLM models based on these high-quality data. Use the search functionality below to explore these microbe cards and compare predictions with documented phenotypes.
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Corynebacterium kutscheri is a notable member of the Corynebacterium genus, primarily recognized for its role as a pathogen in laboratory animals, particularly in rodents. This organism is of significant interest due to its association with respiratory diseases in these animals, which can impact research outcomes in various biomedical studies. Understanding the pathogenic mechanisms of C. kutscheri is crucial for developing effective prevention and treatment strategies in laboratory settings. One of the unique aspects of C. kutscheri is its ability to cause disease in immunocompromised hosts, making it a valuable model for studying host-pathogen interactions and immune responses. The organism is also characterized by its distinct biochemical properties, which can be utilized in differentiating it from other closely related species within the Corynebacterium genus. This specificity is particularly important in clinical diagnostics and epidemiological studies. Furthermore, C. kutscheri has been studied for its potential role in zoonotic transmission, raising concerns about its implications for animal health and safety in research environments. Research on this bacterium contributes to a broader understanding of infectious diseases and their management in both laboratory and veterinary contexts. Overall, Corynebacterium kutscheri serves as an important organism for research, providing insights into microbial pathogenesis, host interactions, and the development of therapeutic interventions.
| Phenotype | Status |
|---|---|
| Motility | LLM-based |
| Gram staining | Literature-based |
| Aerophilicity | Literature-based |
| Extreme environment tole… | Literature-based |
| Biofilm formation | LLM-based |
| Animal pathogenicity | Literature-based |
| Biosafety level | Literature-based |
| Health association | LLM-based |
| Host association | LLM-based |
| Plant pathogenicity | Literature-based |
| Spore formation | Literature-based |
| Hemolysis | LLM-based |
| Cell shape | Literature-based |