This platform represents an effort to synchronize phenotypic information for microbes. We have applied and collected various models, primarily Large Language Model (LLM) based, to predict phenotypes and compare these predictions to high-quality phenotypes documented in scientific literature or phenotyping studies. For each microbe, we've generated a "card" page that collects this information and illustrates how the predictions overlap with ground truth. Additionally, we provide model performance estimates for widely used public LLM models based on these high-quality data. Use the search functionality below to explore these microbe cards and compare predictions with documented phenotypes.
19163
3884
Mesorhizobium sanjuanii is a fascinating species of bacteria belonging to the genus Mesorhizobium, which is known for its role in symbiotic nitrogen fixation. This organism is particularly interesting due to its ability to form nodules on the roots of leguminous plants, facilitating a mutually beneficial relationship that enhances soil fertility. The unique capability of M. sanjuanii to effectively fix atmospheric nitrogen makes it a valuable asset in sustainable agriculture, particularly in regions where soil nutrient depletion is a concern. One of the remarkable aspects of M. sanjuanii is its adaptability to various environmental conditions, which allows it to thrive in diverse ecosystems. This adaptability is crucial for its survival and effectiveness in different soil types and climates, making it a subject of interest for researchers studying plant-microbe interactions and ecological resilience. Additionally, M. sanjuanii has been the focus of studies aimed at understanding the genetic and biochemical pathways involved in symbiosis and nitrogen fixation. Research on this species contributes to the broader understanding of rhizobial symbiosis, which is essential for developing biofertilizers and improving crop yields without the reliance on chemical fertilizers. Furthermore, the genomic studies of M. sanjuanii have revealed insights into its metabolic capabilities and symbiotic mechanisms, providing a model for exploring the evolutionary adaptations of rhizobia. This makes M. sanjuanii not only a key player in agricultural practices but also a significant organism for scientific research in microbiology and environmental science.
| Phenotype | Status |
|---|---|
| Motility | Literature-based |
| Gram staining | Literature-based |
| Aerophilicity | Literature-based |
| Extreme environment tole… | Literature-based |
| Biofilm formation | LLM-based |
| Animal pathogenicity | LLM-based |
| Biosafety level | Literature-based |
| Health association | LLM-based |
| Host association | Literature-based |
| Plant pathogenicity | Literature-based |
| Spore formation | Literature-based |
| Hemolysis | LLM-based |
| Cell shape | Literature-based |