This platform represents an effort to synchronize phenotypic information for microbes. We have applied and collected various models, primarily Large Language Model (LLM) based, to predict phenotypes and compare these predictions to high-quality phenotypes documented in scientific literature or phenotyping studies. For each microbe, we've generated a "card" page that collects this information and illustrates how the predictions overlap with ground truth. Additionally, we provide model performance estimates for widely used public LLM models based on these high-quality data. Use the search functionality below to explore these microbe cards and compare predictions with documented phenotypes.
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Acinetobacter nosocomialis is a notable member of the Acinetobacter genus, primarily recognized for its role in nosocomial infections. This organism is particularly interesting due to its emerging significance in clinical settings, where it has been associated with a variety of infections, including pneumonia, bloodstream infections, and wound infections, especially in immunocompromised patients. One of the most remarkable features of A. nosocomialis is its ability to acquire antibiotic resistance, which poses a significant challenge in treatment. This species has been documented to harbor multiple resistance genes, making it a subject of intense research aimed at understanding the mechanisms of resistance and developing effective therapeutic strategies. Furthermore, A. nosocomialis is often found in hospital environments, where it can persist on surfaces and medical equipment, contributing to its transmission. This persistence highlights the importance of infection control measures in healthcare settings. From a research perspective, the study of A. nosocomialis provides valuable insights into pathogen evolution, particularly in relation to its adaptability and survival in hostile environments. Investigating its genomic features and resistance mechanisms can lead to a better understanding of how such organisms thrive and spread, ultimately informing public health strategies. In summary, Acinetobacter nosocomialis stands out due to its clinical relevance, ability to develop resistance, and its role in hospital-acquired infections, making it a critical focus for ongoing microbiological and epidemiological research.
| Phenotype | Status |
|---|---|
| Motility | LLM-based |
| Gram staining | Literature-based |
| Aerophilicity | Literature-based |
| Extreme environment tole… | Literature-based |
| Biofilm formation | LLM-based |
| Animal pathogenicity | LLM-based |
| Biosafety level | Literature-based |
| Health association | LLM-based |
| Host association | Literature-based |
| Plant pathogenicity | Literature-based |
| Spore formation | Literature-based |
| Hemolysis | LLM-based |
| Cell shape | Literature-based |