Welcome to microbe.cards

This platform represents an effort to synchronize phenotypic information for microbes. We have applied and collected various models, primarily Large Language Model (LLM) based, to predict phenotypes and compare these predictions to high-quality phenotypes documented in scientific literature or phenotyping studies. For each microbe, we've generated a "card" page that collects this information and illustrates how the predictions overlap with ground truth. Additionally, we provide model performance estimates for widely used public LLM models based on these high-quality data. Use the search functionality below to explore these microbe cards and compare predictions with documented phenotypes.

Total Species with high-quality annotations

19163

Species with Additional AI-based Predictions

3884

Evaluated Phenotypes

14

Evaluated Models

18

Enter a taxonomy or microbe name to search for detailed information:

Microbe of the Day: Kutzneria buriramensis

Kutzneria buriramensis is a fascinating actinobacterium that was first isolated from soil in Thailand. This organism is particularly interesting due to its unique metabolic capabilities, which allow it to thrive in diverse environmental conditions. One of the standout features of K. buriramensis is its ability to produce a variety of bioactive compounds, making it a valuable candidate for biotechnological applications and pharmaceutical research. The genus Kutzneria is known for its role in the production of antibiotics, and K. buriramensis is no exception. It has been shown to synthesize compounds that exhibit antimicrobial activity, which could be pivotal in the fight against antibiotic-resistant bacteria. This characteristic not only highlights its potential in drug discovery but also underscores the importance of soil microorganisms in the search for new therapeutic agents. Furthermore, K. buriramensis contributes to our understanding of microbial diversity and ecology, particularly in tropical soil environments. Its isolation from a specific geographic location adds to the biogeographical knowledge of actinobacteria, emphasizing the need for continued exploration of microbial life in under-studied regions. Overall, Kutzneria buriramensis stands out as a promising organism for further research, with implications for both environmental science and medicine.

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Annotation types:
Phenotype Status
Motility Literature-based
Gram staining Literature-based
Aerophilicity Literature-based
Extreme environment tole… Literature-based
Biofilm formation LLM-based
Animal pathogenicity LLM-based
Biosafety level Literature-based
Health association LLM-based
Host association LLM-based
Plant pathogenicity Literature-based
Spore formation Literature-based
Hemolysis LLM-based
Cell shape Literature-based