This platform represents an effort to synchronize phenotypic information for microbes. We have applied and collected various models, primarily Large Language Model (LLM) based, to predict phenotypes and compare these predictions to high-quality phenotypes documented in scientific literature or phenotyping studies. For each microbe, we've generated a "card" page that collects this information and illustrates how the predictions overlap with ground truth. Additionally, we provide model performance estimates for widely used public LLM models based on these high-quality data. Use the search functionality below to explore these microbe cards and compare predictions with documented phenotypes.
19163
3884
Listeria rocourtiae is a lesser-known species within the genus Listeria, which is primarily recognized for its pathogenic members, such as Listeria monocytogenes. What makes L. rocourtiae particularly interesting is its emerging role in food safety and its potential implications in the food industry. This organism has been isolated from various food products, including dairy and meat, indicating its ability to survive in diverse environments, which raises concerns regarding food contamination and spoilage. One of the unique aspects of L. rocourtiae is its psychrotrophic nature, allowing it to thrive at refrigeration temperatures. This characteristic poses a challenge for food preservation methods, as it can grow in conditions where other pathogens may not. The ability to grow at low temperatures makes it a subject of interest for researchers studying foodborne pathogens and spoilage organisms. Additionally, L. rocourtiae has been noted for its genetic diversity and potential for horizontal gene transfer, which could contribute to its adaptability and survival in various niches. This adaptability is crucial for understanding how bacteria evolve in response to environmental pressures, particularly in the context of food safety and public health. Research into L. rocourtiae is still in its early stages, but its potential pathogenicity and role in foodborne illnesses warrant further investigation. Understanding the characteristics and behaviors of this organism could lead to improved strategies for monitoring and controlling foodborne pathogens, ultimately enhancing food safety protocols. As such, Listeria rocourtiae represents a valuable target for ongoing research in microbiology and food science.
| Phenotype | Status |
|---|---|
| Motility | Literature-based |
| Gram staining | Literature-based |
| Aerophilicity | Literature-based |
| Extreme environment tole… | Literature-based |
| Biofilm formation | LLM-based |
| Animal pathogenicity | LLM-based |
| Biosafety level | Literature-based |
| Health association | LLM-based |
| Host association | LLM-based |
| Plant pathogenicity | Literature-based |
| Spore formation | Literature-based |
| Hemolysis | Literature-based |
| Cell shape | Literature-based |