This platform represents an effort to synchronize phenotypic information for microbes. We have applied and collected various models, primarily Large Language Model (LLM) based, to predict phenotypes and compare these predictions to high-quality phenotypes documented in scientific literature or phenotyping studies. For each microbe, we've generated a "card" page that collects this information and illustrates how the predictions overlap with ground truth. Additionally, we provide model performance estimates for widely used public LLM models based on these high-quality data. Use the search functionality below to explore these microbe cards and compare predictions with documented phenotypes.
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Enterobacter cancerogenus is a fascinating bacterium that has garnered attention due to its unique ecological niche and potential implications in health and disease. This species is part of the Enterobacter genus, which is known for its diverse metabolic capabilities and adaptability to various environments, including soil, water, and the gastrointestinal tracts of animals and humans. One of the most interesting aspects of E. cancerogenus is its association with cancer. Research has indicated that certain strains of this bacterium may be linked to the development of cancer in specific contexts, particularly in immunocompromised individuals. This connection opens up avenues for further investigation into the role of gut microbiota in cancer pathogenesis, making E. cancerogenus a valuable organism for studies in microbiome research and oncology. Additionally, E. cancerogenus exhibits remarkable metabolic versatility, allowing it to utilize a wide range of substrates for growth. This characteristic not only contributes to its survival in diverse environments but also makes it a potential candidate for biotechnological applications, such as bioremediation or the production of biofuels. Furthermore, the ability of E. cancerogenus to produce various enzymes, including those involved in the degradation of complex organic compounds, highlights its potential utility in industrial processes. The exploration of these enzymatic pathways could lead to the development of novel biocatalysts for environmental and industrial applications. In summary, Enterobacter cancerogenus stands out due to its intriguing links to cancer, its metabolic flexibility, and its potential applications in biotechnology. Continued research on this organism could yield significant insights into both microbial ecology and human health.
| Phenotype | Status |
|---|---|
| Motility | Literature-based |
| Gram staining | Literature-based |
| Aerophilicity | Literature-based |
| Extreme environment tole… | Literature-based |
| Biofilm formation | Literature-based |
| Animal pathogenicity | Literature-based |
| Biosafety level | Literature-based |
| Health association | LLM-based |
| Host association | Literature-based |
| Plant pathogenicity | Literature-based |
| Spore formation | Literature-based |
| Hemolysis | LLM-based |
| Cell shape | Literature-based |