Superkingdom: Bacteria
Phylum: Actinomycetota
Class: Actinomycetes
Order: Micrococcales
Family: Promicromonosporaceae
Genus: Xylanimonas
Species: Xylanimonas pachnodae
FTP Path:
N/A
File for sequence-based predictions:
N/A
No descriptions available for this microbe.
The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.
Literature-based phenotypes: 8
LLM predicted phenotypes: 4
Phenotype | High-quality annotation | google/gemini-pro-1.5 | google/gemini-pro | google/gemma-7b-it | meta-llama/llama-3-70b-instruct:nitro | mistralai/mistral-7b-instruct | google/gemini-flash-1.5 | mistralai/mixtral-8x7b-instruct:nitro | perplexity/llama-3-sonar-small-32k-chat | openai/gpt-3.5-turbo-0125 | openai/gpt-3.5-turbo-0125 | openai/gpt-4 | openai/gpt-4 | microsoft/wizardlm-2-8x22b | microsoft/wizardlm-2-8x22b | openai/gpt-4o | openai/gpt-4o | anthropic/claude-3.5-sonnet | anthropic/claude-3.5-sonnet | google/palm-2-chat-bison-32k | google/palm-2-chat-bison-32k | meta-llama/llama-3-8b-instruct:nitro | meta-llama/llama-3-8b-instruct:nitro | openchat/openchat-7b | openchat/openchat-7b | microsoft/phi-3-mini-128k-instruct | microsoft/phi-3-mini-128k-instruct | anthropic/claude-3-haiku:beta | anthropic/claude-3-haiku:beta |
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Motility | FALSE | false ✓ | false ✓ | true ✗ | true ✗ | true ✗ | true ✗ | false ✓ | true ✗ | true ✗ | true ✗ | false ✓ | false ✓ | false ✓ | false ✓ | true ✗ | true ✗ | false ✓ | false ✓ | true ✗ | true ✗ | true ✗ | true ✗ | false ✓ | false ✓ | true ✗ | true ✗ | true ✗ | true ✗ |
Gram staining | gram stain positive | gram stain negative ✗ | gram stain negative ✗ | gram stain negative ✗ | gram stain positive ✓ | gram stain variable ✗ | gram stain negative ✗ | gram stain positive ✓ | gram stain negative ✗ | N/A | gram stain negative ✗ | N/A | gram stain positive ✓ | N/A | gram stain negative ✗ | N/A | gram stain positive ✓ | N/A | gram stain positive ✓ | N/A | gram stain negative ✗ | N/A | gram stain negative ✗ | N/A | gram stain negative ✗ | N/A | gram stain variable ✗ | N/A | gram stain negative ✗ |
Aerophilicity | anaerobic | aerobic ✗ | N/A | N/A | N/A | aerotolerant ✗ | N/A | N/A | N/A | facultatively anaerobic ✗ | facultatively anaerobic ✗ | aerobic ✗ | aerobic ✗ | aerobic ✗ | aerobic ✗ | aerobic ✗ | aerobic ✗ | aerobic ✗ | aerobic ✗ | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A |
Extreme environment tolerance | FALSE | false ✓ | false ✓ | true ✗ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | true ✗ | true ✗ |
Biofilm formation | N/A | true | true | true | true | true | true | false | true | true | true | false | false | true | true | true | true | true | true | true | true | true | true | false | false | true | true | true | true |
Animal pathogenicity | N/A | false | false | false | false | false | false | false | false | false | false | false | false | false | false | false | false | false | false | false | false | false | false | false | false | false | false | false | false |
Biosafety level | biosafety level 1 | biosafety level 1 ✓ | biosafety level 1 ✓ | biosafety level 2 ✗ | biosafety level 1 ✓ | N/A | biosafety level 1 ✓ | biosafety level 1 ✓ | biosafety level 1 ✓ | biosafety level 1 ✓ | biosafety level 1 ✓ | biosafety level 1 ✓ | biosafety level 1 ✓ | biosafety level 1 ✓ | biosafety level 1 ✓ | biosafety level 1 ✓ | biosafety level 1 ✓ | biosafety level 1 ✓ | biosafety level 1 ✓ | biosafety level 1 ✓ | biosafety level 1 ✓ | biosafety level 1 ✓ | biosafety level 1 ✓ | biosafety level 2 ✗ | biosafety level 2 ✗ | biosafety level 2 ✗ | biosafety level 2 ✗ | biosafety level 1 ✓ | biosafety level 1 ✓ |
Health association | N/A | true | false | false | true | false | false | false | true | false | false | true | true | true | true | true | true | true | true | false | false | true | true | false | false | false | false | true | true |
Host association | N/A | false | false | false | true | false | false | false | true | false | false | false | false | false | false | false | false | false | false | false | false | true | true | false | false | true | true | false | false |
Plant pathogenicity | FALSE | false ✓ | false ✓ | false ✓ | true ✗ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | true ✗ | true ✗ | false ✓ | false ✓ | true ✗ | true ✗ |
Spore formation | FALSE | false ✓ | false ✓ | false ✓ | false ✓ | true ✗ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ | false ✓ |
Hemolysis | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A | N/A |
Cell shape | bacillus | bacillus ✓ | bacillus ✓ | bacillus ✓ | bacillus ✓ | bacillus ✓ | bacillus ✓ | bacillus ✓ | bacillus ✓ | bacillus ✓ | bacillus ✓ | bacillus ✓ | bacillus ✓ | bacillus ✓ | bacillus ✓ | bacillus ✓ | bacillus ✓ | bacillus ✓ | bacillus ✓ | bacillus ✓ | bacillus ✓ | bacillus ✓ | bacillus ✓ | bacillus ✓ | bacillus ✓ | bacillus ✓ | bacillus ✓ | bacillus ✓ | bacillus ✓ |