Vibrio toranzoniae

General Information

Vibrio toranzoniae is a fascinating microorganism belonging to the genus Vibrio, which is well-known for its diverse and often ecologically significant species. One of the most intriguing aspects of V. toranzoniae is its bioluminescent properties. This characteristic makes it a subject of interest in marine biology and ecological studies, as bioluminescence plays a crucial role in marine ecosystems, including predator-prey interactions and communication among marine organisms. Another notable feature of V. toranzoniae is its adaptability to various marine environments. It has been isolated from different marine habitats, indicating its versatility and resilience. This adaptability makes it a valuable model organism for studying environmental stress responses and microbial ecology in marine settings. From a biotechnological perspective, V. toranzoniae holds potential due to its production of unique secondary metabolites. These compounds can have antimicrobial, antifungal, or even anticancer properties, making this bacterium a potential source for novel pharmaceuticals. Researchers are particularly interested in exploring these metabolites for their potential applications in medicine and industry. In summary, Vibrio toranzoniae is a microorganism of significant interest due to its bioluminescence, environmental adaptability, and potential for producing valuable secondary metabolites. These characteristics make it a valuable subject for research in marine biology, ecology, and biotechnology.

Vibrio toranzoniae is a fascinating marine bacterium that has garnered attention due to its unique ecological niche and potential biotechnological applications. This organism is primarily found in coastal waters and is known for its ability to thrive in environments with varying salinity levels, making it an excellent model for studying osmoregulation and adaptation mechanisms in marine microorganisms. One of the most interesting aspects of Vibrio toranzoniae is its production of bioactive compounds, which have shown promise in pharmaceutical research. These compounds may possess antimicrobial properties, providing a potential avenue for the development of new antibiotics in an era of increasing antibiotic resistance. The genetic and biochemical pathways involved in the synthesis of these compounds are a rich area for exploration, offering insights into natural product biosynthesis. Additionally, Vibrio toranzoniae has been studied for its role in the marine ecosystem, particularly in nutrient cycling and its interactions with other marine organisms. Its ability to degrade complex organic materials contributes to the health of marine environments, making it a valuable organism for ecological studies. Furthermore, the organism's genome has been sequenced, revealing genes that are involved in various metabolic pathways, including those related to the utilization of different carbon sources. This genomic information opens up possibilities for genetic engineering and synthetic biology applications, where researchers can manipulate these pathways for bioremediation or bioenergy production. In summary, Vibrio toranzoniae stands out not only for its ecological significance but also for its potential contributions to biotechnology and medicine, making it a subject of ongoing research interest.

Taxonomy

Superkingdom: Bacteria

Phylum: Pseudomonadota

Class: Gammaproteobacteria

Order: Vibrionales

Family: Vibrionaceae

Genus: Vibrio

Species: Vibrio toranzoniae

NCBI ID

1194427

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCF/024/347/655/GCF_024347655.1_ASM2434765v1

File for sequence-based predictions:
GCF_024347655.1_ASM2434765v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The organism Vibrio toranzoniae is a marine bacterium that has been associated with various clinical implications, particularly in the context of infections and pathogenicity. It is known to inhabit coastal waters and can be linked to gastrointestinal infections in humans, especially in individuals who consume raw or undercooked seafood. Clinical cases have reported symptoms such as diarrhea, abdominal pain, and vomiting, which are characteristic of vibrio-related gastroenteritis. In terms of antimicrobial resistance, Vibrio toranzoniae has shown varying susceptibility to common antibiotics, raising concerns about treatment options for infected individuals. The emergence of resistant strains can complicate management and necessitate the use of alternative therapies. Moreover, this organism's ability to evade the immune response is noteworthy. It possesses mechanisms that allow it to survive in hostile environments, including the production of biofilms and the secretion of virulence factors that can disrupt host immune signaling. While Vibrio toranzoniae is not as widely studied as other Vibrio species, its potential role in outbreaks linked to seafood consumption underscores the importance of monitoring and understanding its clinical relevance. Public health measures aimed at preventing foodborne illnesses are crucial, particularly in regions where this bacterium is prevalent. Overall, the clinical implications of Vibrio toranzoniae highlight the need for ongoing research to better understand its pathogenic potential and to develop effective strategies for prevention and treatment.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Vibrio toranzoniae is a marine bacterium commonly found in coastal waters and estuarine environments. This microorganism thrives in brackish waters, where the salinity levels fluctuate, making it well-adapted to varying conditions. Its presence is often associated with sediment-rich areas where organic matter is abundant, providing a nutrient source for its growth. In these marine biomes, Vibrio toranzoniae plays a crucial role in the decomposition of organic material, contributing to nutrient cycling within the ecosystem. It is known to interact with various marine organisms, including fish and invertebrates, often forming symbiotic relationships that can enhance the health and growth of its hosts. For instance, it may assist in the digestion of food or provide protection against pathogens. Additionally, Vibrio toranzoniae is capable of thriving in high-temperature environments, which are characteristic of certain tropical and subtropical regions. This adaptability allows it to occupy a niche where few other microorganisms can survive, thus playing a significant role in the microbial community structure of these habitats. Overall, Vibrio toranzoniae is an important component of the marine ecosystem, contributing to both the ecological balance and the health of marine life through its various interactions and roles.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Vibrio toranzoniae has shown potential in various industrial applications, particularly in the fields of biotechnology, waste management, and pharmaceutical development. This organism is known for its ability to thrive in marine environments, which can be harnessed for biodegradation processes, particularly in the breakdown of organic pollutants in aquatic systems. In the realm of biotechnology, Vibrio toranzoniae can be utilized in fermentation processes to produce valuable metabolites, including enzymes that can be used in food processing and other industrial applications. Its enzymatic activity is particularly noteworthy, as it can produce proteases and lipases that are essential in various biochemical reactions. Moreover, in waste management, Vibrio toranzoniae has been studied for its role in the biodegradation of hydrocarbons, making it a candidate for bioremediation efforts in oil spill clean-ups. This capability not only helps in restoring contaminated environments but also highlights the organism's potential in sustainable waste management practices. In the pharmaceutical industry, the unique metabolic pathways of Vibrio toranzoniae may lead to the discovery of novel compounds with antimicrobial properties, which could be developed into new drugs. The organism's ability to produce bioactive compounds is an area of ongoing research, with implications for the development of new therapeutic agents. Overall, Vibrio toranzoniae presents a multifaceted opportunity for various industries, particularly through its involvement in fermentation, biodegradation, and enzyme production, making it a valuable organism for future industrial applications.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 10

LLM predicted phenotypes: 3

Phenotype	High-quality annotation	meta-llama/llama-3-70b-instruct:nitro	meta-llama/llama-3-70b-instruct:nitro	google/gemini-pro	mistralai/mixtral-8x7b-instruct:nitro	openai/gpt-4o	openai/gpt-4o	google/gemini-pro-1.5	anthropic/claude-3.5-sonnet	anthropic/claude-3.5-sonnet	anthropic/claude-3-haiku:beta	mistralai/mistral-7b-instruct	perplexity/llama-3-sonar-small-32k-chat	openchat/openchat-7b	google/gemma-7b-it	google/gemma-7b-it	google/gemini-flash-1.5	google/gemini-flash-1.5	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	openai/gpt-4	openai/gpt-4	meta-llama/llama-3-8b-instruct:nitro	meta-llama/llama-3-8b-instruct:nitro	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct
Motility	TRUE	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓
Gram staining	gram stain negative	N/A	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	N/A	gram stain negative ✓	gram stain negative ✓	N/A	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain variable ✗
Aerophilicity	aerobic	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	N/A	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗
Biofilm formation	N/A	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Animal pathogenicity	TRUE	true ✓	true ✓	true ✓	false ✗	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	false ✗	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗
Biosafety level	biosafety level 1	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓
Health association	N/A	true	true	true	true	true	true	true	true	true	true	false	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Host association	FALSE	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	N/A	beta	beta	gamma	N/A	beta	beta	N/A	beta	beta	beta	N/A	N/A	N/A	alpha	alpha	beta	beta	N/A	N/A	beta	beta	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	bacillus	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	spirillum ✗	spirillum ✗

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