Actinomyces haliotis

General Information

Source: gpt-4o-mini-2024-07-18

Actinomyces haliotis is a fascinating species of bacteria that has garnered attention due to its unique ecological niche and potential applications in biotechnology. This organism is primarily associated with marine environments, particularly in association with the abalone, a type of mollusk. Its presence in the gut of Haliotis species suggests a symbiotic relationship, which is intriguing for researchers studying host-microbe interactions in marine ecosystems. One of the most interesting aspects of A. haliotis is its ability to degrade complex polysaccharides, which could have significant implications for bioremediation and waste management. The enzymatic pathways utilized by this bacterium to break down these compounds are of particular interest, as they may offer insights into the development of sustainable processes for converting organic waste into valuable products. Furthermore, the metabolic capabilities of A. haliotis may contribute to the overall health of its host, making it a valuable organism for studies focused on aquaculture and marine biology. Understanding how this bacterium interacts with its host could lead to improved practices in the farming of abalone and other marine species, enhancing yield and sustainability. In summary, Actinomyces haliotis stands out not only for its ecological role but also for its potential applications in biotechnology and aquaculture, making it a valuable subject for ongoing research in microbial ecology and applied microbiology.

Taxonomy

Superkingdom: Bacteria

Phylum: Actinomycetota

Class: Actinomycetes

Order: Actinomycetales

Family: Actinomycetaceae

Genus: Actinomyces

Species: Actinomyces haliotis

NCBI ID

1280843

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCA/015/355/765/GCA_015355765.1_ASM1535576v1

File for sequence-based predictions:
GCA_015355765.1_ASM1535576v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The organism Actinomyces haliotis is a member of the Actinobacteria phylum and is primarily associated with marine environments, particularly in association with abalone. While its clinical implications in human health are not extensively documented, it is important to note that members of the Actinomyces genus are known to be part of the normal flora of the human mouth and gastrointestinal tract. However, they can also be implicated in various infections when they breach mucosal barriers, leading to conditions such as actinomycosis, which is characterized by chronic granulomatous lesions. In terms of pathogenicity, Actinomyces haliotis has not been directly linked to significant human disease, but its relatives, such as Actinomyces israelii, are known to cause serious infections, particularly in immunocompromised individuals. The potential for immune evasion strategies, such as biofilm formation and the ability to survive in anaerobic conditions, may also be relevant for understanding its pathogenic potential. Regarding antimicrobial resistance, while specific data on Actinomyces haliotis is limited, the genus has shown varying degrees of resistance to common antibiotics, which is a concern in treating infections caused by related species. Currently, there are no known medical applications, such as probiotics or vaccines, specifically involving Actinomyces haliotis. However, the study of its interactions with marine organisms and its ecological role may provide insights into potential biotechnological applications in the future. Overall, while Actinomyces haliotis is not a primary pathogen, its relationship with other Actinomyces species and its environmental context warrant further investigation into its clinical relevance.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Actinomyces haliotis is a species of bacteria commonly associated with the marine environments where it plays a significant role in the health of its host, the abalone. This microorganism thrives in the gastrointestinal tract of these mollusks, contributing to the digestion of complex carbohydrates and aiding in nutrient absorption. Its presence is crucial for the overall well-being of the abalone, highlighting its role in a symbiotic relationship that benefits both the host and the bacteria. In addition to its symbiotic interactions, Actinomyces haliotis is also found in biofilms on the surfaces of marine substrates, where it can interact with other microbial communities. These biofilms are essential for nutrient cycling and can influence the overall health of the marine ecosystem. The ability of Actinomyces haliotis to adapt to varying salinity levels and temperature ranges in its marine habitat showcases its ecological versatility. Overall, Actinomyces haliotis exemplifies the intricate relationships within marine biomes, particularly in the context of host-associated microbiomes, where it plays a vital role in maintaining the ecological balance and health of its environment.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Actinomyces haliotis has shown potential in various industrial applications due to its unique metabolic capabilities. One of the most notable areas is in biotechnology, where Actinomyces haliotis is utilized for its ability to produce specific enzymes that can be harnessed in enzyme production processes. These enzymes can be applied in food processing, textile manufacturing, and even in the production of bioactive compounds. In the realm of waste management, Actinomyces haliotis has demonstrated effectiveness in biodegradation processes, particularly in the breakdown of complex organic materials. This capability makes it a candidate for use in composting and the treatment of organic waste, contributing to more sustainable waste management practices. Furthermore, there is potential for Actinomyces haliotis in biofuel production. Its metabolic pathways may be exploited in fermentation processes to convert biomass into biofuels, such as ethanol or biogas, thereby supporting renewable energy initiatives. In pharmaceutical development, the organism's ability to synthesize bioactive compounds can be explored for the production of antibiotics or other therapeutic agents, making it a valuable resource in the pharmaceutical industry. Overall, Actinomyces haliotis presents a multifaceted opportunity for innovation across several industrial sectors.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 9

LLM predicted phenotypes: 4

Phenotype	High-quality annotation	anthropic/claude-3-haiku:beta	google/gemma-7b-it	meta-llama/llama-3-70b-instruct:nitro	google/palm-2-chat-bison-32k	meta-llama/llama-3-8b-instruct:nitro	perplexity/llama-3-sonar-small-32k-chat	google/gemini-pro-1.5	google/gemini-flash-1.5	google/gemini-flash-1.5	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	openai/gpt-4	openai/gpt-4	mistralai/mistral-7b-instruct	mistralai/mistral-7b-instruct	google/gemini-pro	google/gemini-pro	mistralai/mixtral-8x7b-instruct:nitro	mistralai/mixtral-8x7b-instruct:nitro	openchat/openchat-7b	openchat/openchat-7b	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	openai/gpt-4o	openai/gpt-4o	anthropic/claude-3.5-sonnet	anthropic/claude-3.5-sonnet	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct
Motility	FALSE	false ✓	true ✗	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Gram staining	gram stain positive	gram stain positive ✓	gram stain negative ✗	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain variable ✗	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain negative ✗
Aerophilicity	aerobic	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Biofilm formation	N/A	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	false	false	true	true	true	true	true	true	true	true
Animal pathogenicity	N/A	true	true	true	true	true	true	true	true	true	false	false	false	false	true	true	true	true	false	false	true	true	true	true	false	false	false	false	false	false
Biosafety level	biosafety level 1	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓
Health association	N/A	true	true	true	true	true	true	true	true	true	false	false	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	false	false
Host association	N/A	true	false	true	true	true	true	true	true	true	false	false	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	false	false
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	FALSE	true ✗	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	gamma	alpha ✗	N/A	N/A	N/A	N/A	N/A	N/A	alpha ✗	alpha ✗	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	bacillus	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	coccus ✗	coccus ✗	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	coccus ✗	coccus ✗

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