Prescottella defluvii

General Information

Prescottella defluvii is a fascinating microorganism that has garnered attention due to its unique ecological niche and potential applications in environmental biotechnology. This bacterium was originally isolated from wastewater treatment plants, indicating its role in the degradation of organic pollutants. One of the most intriguing aspects of P. defluvii is its ability to break down complex organic compounds, making it a valuable candidate for bioremediation efforts. In addition to its environmental applications, Prescottella defluvii has been studied for its metabolic versatility. It can utilize a wide range of substrates, which underscores its adaptability to various environmental conditions. This metabolic flexibility is not only interesting from a basic research perspective but also holds promise for industrial applications where diverse metabolic capabilities are advantageous. Moreover, P. defluvii has been noted for its potential in the production of bioactive compounds. These compounds could have pharmaceutical applications, adding another layer of value to this microorganism. The study of its genome has revealed several genes associated with the synthesis of secondary metabolites, which are often the source of novel antibiotics and other therapeutic agents. In summary, Prescottella defluvii stands out due to its environmental resilience, metabolic diversity, and potential for biotechnological applications. Its ability to thrive in polluted environments and contribute to the breakdown of harmful substances makes it a key player in environmental sustainability efforts. Additionally, its capacity to produce bioactive compounds opens up exciting avenues for future research and development in the pharmaceutical industry.

Prescottella defluvii is a fascinating bacterium that has garnered attention due to its unique ecological niche and metabolic capabilities. This organism is primarily known for its role in the degradation of complex organic compounds, particularly in environments rich in organic waste, such as wastewater treatment facilities. Its ability to break down various pollutants makes it a valuable asset in bioremediation efforts, contributing to the detoxification of contaminated environments. One of the most interesting aspects of Prescottella defluvii is its capacity to thrive in anaerobic conditions, which allows it to participate in the anaerobic digestion process. This process not only aids in waste management but also facilitates the production of biogas, a renewable energy source. The metabolic pathways utilized by P. defluvii for organic matter degradation are of significant interest for researchers looking to enhance biogas production and improve waste treatment technologies. Furthermore, Prescottella defluvii has been studied for its potential applications in the field of environmental microbiology, particularly in understanding microbial interactions within complex communities. Its presence in diverse ecosystems highlights its adaptability and resilience, making it a model organism for studying microbial ecology and evolution. Research into P. defluvii could lead to advancements in sustainable practices and environmental conservation efforts. Overall, this microorganism exemplifies the intricate relationships between bacteria and their environments, showcasing the importance of microbial life in maintaining ecological balance.

Taxonomy

Superkingdom: Bacteria

Phylum: Actinomycetota

Class: Actinomycetes

Order: Mycobacteriales

Family: Nocardiaceae

Genus: Prescottella

Species: Prescottella defluvii

NCBI ID

1323361

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCA/000/738/775/GCA_000738775.1_ASM73877v1

File for sequence-based predictions:
GCA_000738775.1_ASM73877v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The microorganism Prescottella defluvii is a Gram-negative bacterium that has been associated with various clinical implications, particularly in immunocompromised patients. It is known to be part of the normal flora of the human gastrointestinal tract but can become pathogenic under certain conditions. Infections caused by Prescottella defluvii are rare but have been documented, particularly in cases of opportunistic infections following surgical procedures or in patients with underlying health issues. The organism has been implicated in bacteremia and abscess formation, highlighting its potential to cause serious health complications. One of the notable aspects of Prescottella defluvii is its antimicrobial resistance profile. It has shown resistance to multiple classes of antibiotics, which complicates treatment options for infections it may cause. This resistance is particularly concerning in a clinical setting, where effective management of infections is critical. In terms of immune evasion, Prescottella defluvii may utilize various strategies to avoid detection and destruction by the host's immune system, although specific mechanisms are not fully elucidated. Its ability to persist in the human body, especially in compromised individuals, raises questions about its role in chronic infections and the potential for biofilm formation in clinical settings. While research on Prescottella defluvii is still emerging, its presence in clinical specimens underscores the importance of recognizing this organism as a potential pathogen, particularly in patients with weakened immune systems. Further studies are needed to fully understand its pathogenic mechanisms and to develop effective therapeutic strategies.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Prescottella defluvii is a species of microorganism commonly associated with freshwater ecosystems, particularly in environments influenced by organic matter decomposition. This organism thrives in sediment layers of rivers, lakes, and wetlands, where it plays a crucial role in nutrient cycling and organic matter breakdown. Its presence is often indicative of eutrophic conditions, where nutrient levels are elevated, leading to increased biological activity. In these aquatic habitats, Prescottella defluvii interacts with various other microorganisms, forming complex microbial communities that contribute to the overall health of the ecosystem. It is known to engage in symbiotic relationships with other bacteria and fungi, enhancing the degradation of organic materials and facilitating nutrient availability for plants and other organisms. Furthermore, this microorganism exhibits remarkable environmental adaptability, allowing it to thrive in varying conditions, including fluctuations in temperature, pH, and oxygen levels. Its ability to metabolize a wide range of organic compounds makes it a vital player in the biogeochemical cycles of freshwater environments, particularly in the breakdown of pollutants and organic waste. Overall, Prescottella defluvii is an essential component of freshwater biomes, contributing to ecosystem stability and resilience through its roles in decomposition, nutrient cycling, and microbial interactions.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Prescottella defluvii has shown significant potential in various industrial applications, particularly in the fields of biotechnology, waste management, and biofuel production. This organism is known for its ability to thrive in wastewater environments, making it a valuable asset in waste treatment processes. Its role in biodegradation allows it to effectively break down organic pollutants, thus contributing to the purification of wastewater and reducing environmental impact. In the realm of biofuel production, Prescottella defluvii can be utilized in fermentation processes to convert organic substrates into bioethanol. This capability is particularly important as the demand for renewable energy sources continues to rise. The efficiency of this microorganism in fermentative pathways can lead to higher yields of biofuels, making it a promising candidate for sustainable energy solutions. Additionally, Prescottella defluvii has been studied for its potential in pharmaceutical development. Its metabolic pathways may produce bioactive compounds that could be harnessed for medicinal purposes. The enzymatic activities exhibited by this microorganism can also be explored for the production of specific enzymes that are valuable in various industrial processes, including food processing and biocatalysis. Overall, the diverse applications of Prescottella defluvii in biodegradation, fermentation, and enzyme production highlight its importance in advancing sustainable practices across multiple industries.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 8

LLM predicted phenotypes: 5

Phenotype	High-quality annotation	mistralai/mistral-7b-instruct	google/gemini-flash-1.5	anthropic/claude-3.5-sonnet	google/gemma-7b-it	meta-llama/llama-3-70b-instruct:nitro	meta-llama/llama-3-8b-instruct:nitro	openchat/openchat-7b	anthropic/claude-3-haiku:beta	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	mistralai/mixtral-8x7b-instruct:nitro	mistralai/mixtral-8x7b-instruct:nitro	openai/gpt-4	openai/gpt-4	google/gemini-pro-1.5	google/gemini-pro-1.5	google/gemini-pro	google/gemini-pro	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	perplexity/llama-3-sonar-small-32k-chat	perplexity/llama-3-sonar-small-32k-chat	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	openai/gpt-4o	openai/gpt-4o	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct
Motility	FALSE	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓
Gram staining	gram stain positive	gram stain negative ✗	gram stain negative ✗	gram stain negative ✗	gram stain negative ✗	gram stain negative ✗	gram stain negative ✗	gram stain negative ✗	gram stain negative ✗	N/A	gram stain negative ✗	N/A	gram stain negative ✗	N/A	gram stain negative ✗	N/A	gram stain negative ✗	N/A	gram stain negative ✗	N/A	gram stain negative ✗	N/A	gram stain negative ✗	N/A	gram stain negative ✗	N/A	gram stain positive ✓	N/A	gram stain variable ✗
Aerophilicity	aerobic	aerotolerant ✗	N/A	aerobic ✓	N/A	N/A	N/A	N/A	N/A	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	anaerobic ✗	anaerobic ✗	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	false ✓	false ✓	false ✓	true ✗	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗
Biofilm formation	N/A	false	true	true	true	true	true	false	true	true	true	true	true	false	false	true	true	false	false	true	true	true	true	true	true	true	true	true	true
Animal pathogenicity	N/A	false	false	false	false	true	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	true	true	false	false	false	false
Biosafety level	biosafety level 1	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓
Health association	N/A	false	false	false	false	true	true	false	false	false	false	true	true	false	false	true	true	false	false	true	true	true	true	true	true	false	false	true	true
Host association	N/A	false	false	false	false	true	true	false	false	false	false	true	true	false	false	false	false	false	false	false	false	true	true	true	true	false	false	false	false
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	N/A	N/A	gamma	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	bacillus	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	coccus ✗	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	coccus ✗	coccus ✗	coccus ✗	coccus ✗	bacillus ✓	bacillus ✓	coccus ✗	coccus ✗

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