Brachybacterium aquaticum

General Information

Brachybacterium aquaticum is a fascinating microorganism that has garnered attention due to its unique habitat and potential applications. This bacterium was first isolated from a freshwater environment, which is reflected in its species name, aquaticum. One of the most intriguing aspects of Brachybacterium aquaticum is its ability to thrive in aquatic ecosystems, which often present challenging conditions such as varying nutrient levels and potential competition with other microorganisms. From a research perspective, Brachybacterium aquaticum is valuable due to its potential role in bioremediation. Its presence in freshwater environments suggests that it may possess metabolic pathways capable of breaking down pollutants or organic matter, making it a candidate for studies focused on environmental cleanup. Additionally, the genus Brachybacterium is known for its diverse metabolic capabilities, which could include the production of novel enzymes or secondary metabolites with industrial or pharmaceutical applications. Another noteworthy characteristic of Brachybacterium aquaticum is its adaptability. The ability to survive and potentially thrive in various aquatic conditions indicates a level of metabolic flexibility that could be harnessed for biotechnological applications. Researchers are particularly interested in understanding the genetic and biochemical mechanisms that enable this adaptability, as it could lead to the development of robust microbial strains for use in various industries. In summary, Brachybacterium aquaticum stands out due to its unique habitat, potential for bioremediation, and metabolic versatility. These characteristics make it a promising subject for further research and potential applications in environmental and industrial biotechnology.

Brachybacterium aquaticum is a fascinating species of bacteria that has garnered attention due to its unique ecological niche and metabolic capabilities. Isolated from aquatic environments, this organism thrives in freshwater habitats, showcasing its adaptability to varying conditions. One of the most interesting aspects of Brachybacterium aquaticum is its ability to degrade complex organic compounds, which positions it as a potential candidate for bioremediation efforts. This characteristic is particularly valuable in the context of environmental cleanup, where the breakdown of pollutants is crucial for restoring ecosystems. Additionally, Brachybacterium aquaticum has been studied for its role in nutrient cycling within aquatic systems. Its interactions with other microorganisms contribute to the overall health and stability of these environments. The organism's metabolic versatility allows it to utilize a range of substrates, making it an important player in the microbial community. Research into Brachybacterium aquaticum also sheds light on the evolutionary adaptations of bacteria in response to aquatic habitats. Its genomic features and metabolic pathways provide insights into how microorganisms can thrive in diverse ecological settings. Overall, Brachybacterium aquaticum stands out not only for its ecological significance but also for its potential applications in biotechnology and environmental science.

Taxonomy

Superkingdom: Bacteria

Phylum: Actinomycetota

Class: Actinomycetes

Order: Micrococcales

Family: Dermabacteraceae

Genus: Brachybacterium

Species: Brachybacterium aquaticum

NCBI ID

1432564

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/204/755/GCA_014204755.1_ASM1420475v1

File for sequence-based predictions:
GCA_014204755.1_ASM1420475v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The microorganism Brachybacterium aquaticum is a member of the genus Brachybacterium, which is known for its environmental presence, particularly in aquatic habitats. While it is not commonly associated with human disease, its clinical relevance has been noted in specific contexts. Clinical implications of Brachybacterium aquaticum include its potential role in infections in immunocompromised patients, where it may act as an opportunistic pathogen. There have been isolated reports of this organism being identified in clinical specimens, suggesting that it can be involved in nosocomial infections or wound infections. Furthermore, Brachybacterium aquaticum has been studied for its ability to degrade various environmental pollutants, which may have implications for bioremediation strategies. However, its role in human health is not well-documented, and more research is needed to fully understand its pathogenic potential and interactions with the human immune system. In terms of antimicrobial resistance, there is limited information available regarding resistance mechanisms specific to Brachybacterium aquaticum. Nonetheless, the presence of this organism in clinical settings raises concerns about the potential for antibiotic resistance in opportunistic pathogens, particularly in patients with compromised immune systems. Overall, while Brachybacterium aquaticum is not a primary pathogen, its detection in clinical samples warrants attention, especially in the context of opportunistic infections and the need for ongoing surveillance of environmental bacteria that may pose risks to human health.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Brachybacterium aquaticum is a species of bacteria that is primarily associated with freshwater environments and aquatic ecosystems. This microorganism thrives in a variety of habitats, including lakes, ponds, and rivers, where it plays a crucial role in the nutrient cycling processes. Its presence is often linked to the decomposition of organic matter, contributing to the overall health of the aquatic biome by breaking down complex organic compounds into simpler forms that can be utilized by other organisms. In these freshwater habitats, Brachybacterium aquaticum exhibits notable interactions with its surroundings. It often engages in symbiotic relationships with other microorganisms, such as algae and protozoa, enhancing the nutrient availability in the ecosystem. This bacterium can also adapt to varying environmental conditions, including changes in temperature and nutrient levels, which allows it to thrive in diverse aquatic settings. Furthermore, Brachybacterium aquaticum is known for its ability to degrade pollutants, making it an important player in bioremediation efforts within freshwater systems. By breaking down harmful substances, it helps maintain the ecological balance and supports the health of aquatic life. Overall, the ecological niche of Brachybacterium aquaticum is characterized by its role as a decomposer and its interactions within the freshwater biome, highlighting its importance in maintaining the integrity and functionality of these ecosystems.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Brachybacterium aquaticum has shown potential in various industrial applications, particularly in the fields of biotechnology, waste management, and pharmaceutical development. This organism is known for its ability to thrive in aquatic environments, which makes it a candidate for biodegradation processes, particularly in the breakdown of pollutants in water bodies. Its enzymatic activity can facilitate the degradation of complex organic compounds, thus contributing to waste treatment and improving water quality. In the realm of biotechnology, Brachybacterium aquaticum can be utilized in fermentation processes, where it may play a role in the production of bioactive compounds. These compounds can have applications in the development of pharmaceuticals, including antibiotics and other therapeutic agents. The organism's metabolic pathways are of interest for the synthesis of valuable biochemicals, which can be harnessed for various industrial purposes. Moreover, its potential in biofuel production is noteworthy, as certain strains of Brachybacterium have been observed to participate in the conversion of biomass into biofuels through fermentation processes. This capability aligns with the growing demand for sustainable energy sources and the reduction of reliance on fossil fuels. Overall, Brachybacterium aquaticum presents a multifaceted opportunity for industries focused on environmental sustainability, energy production, and health care, making it a valuable organism for future research and application.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 8

LLM predicted phenotypes: 5

Phenotype	High-quality annotation	google/gemini-flash-1.5	anthropic/claude-3.5-sonnet	google/gemma-7b-it	mistralai/mistral-7b-instruct	mistralai/mixtral-8x7b-instruct:nitro	perplexity/llama-3-sonar-small-32k-chat	anthropic/claude-3-haiku:beta	meta-llama/llama-3-70b-instruct:nitro	meta-llama/llama-3-70b-instruct:nitro	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	openai/gpt-4	openai/gpt-4	openai/gpt-4o	openai/gpt-4o	google/gemini-pro-1.5	google/gemini-pro-1.5	google/gemini-pro	google/gemini-pro	meta-llama/llama-3-8b-instruct:nitro	meta-llama/llama-3-8b-instruct:nitro	openchat/openchat-7b	openchat/openchat-7b	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct
Motility	FALSE	false ✓	false ✓	true ✗	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Gram staining	gram stain positive	gram stain positive ✓	gram stain positive ✓	gram stain negative ✗	gram stain positive ✓	gram stain positive ✓	gram stain negative ✗	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain negative ✗	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain negative ✗
Aerophilicity	aerobic	N/A	aerobic ✓	N/A	N/A	N/A	N/A	N/A	aerobic ✓	aerobic ✓	facultatively anaerobic ✗	facultatively anaerobic ✗	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	true ✗	false ✓	true ✗	false ✓	true ✗	false ✓	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓
Biofilm formation	N/A	true	true	true	false	true	true	true	true	true	true	true	true	true	true	true	true	true	false	false	true	true	true	true	false	false	true	true	true	true
Animal pathogenicity	N/A	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false
Biosafety level	biosafety level 1	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓
Health association	N/A	false	false	true	false	true	true	true	false	false	false	false	false	false	false	false	false	false	false	false	true	true	true	true	true	true	false	false	false	false
Host association	FALSE	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	N/A	gamma	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	N/A	coccus	bacillus	bacillus	bacillus	coccus	coccus	bacillus	coccus	coccus	bacillus	bacillus	bacillus	bacillus	coccus	coccus	coccus	coccus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	coccus	coccus	coccus	coccus	coccus	coccus

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