Mycobacterium palustre

General Information

Mycobacterium palustre is a fascinating microorganism that belongs to the genus Mycobacterium. This genus is well-known for including species that cause significant diseases in humans, such as Mycobacterium tuberculosis and Mycobacterium leprae. However, M. palustre is primarily of interest due to its environmental niche and potential applications in biotechnology and environmental science. One of the most intriguing aspects of M. palustre is its habitat. This bacterium is typically found in wetland environments, which suggests it has unique adaptations that allow it to thrive in such conditions. Wetlands are complex ecosystems with fluctuating conditions, and the ability of M. palustre to survive and possibly contribute to the nutrient cycles in these environments makes it a subject of interest for ecological studies. From a research perspective, M. palustre is valuable for several reasons: 1. Bioremediation Potential: Wetlands are often sites of pollution, and microorganisms that can survive in these environments may have capabilities for breaking down pollutants. M. palustre could potentially be harnessed for bioremediation efforts, helping to clean up contaminated water bodies. 2. Metabolic Diversity: The metabolic pathways of M. palustre are of interest because they may include unique enzymes and biochemical processes that are not found in other Mycobacterium species. This could lead to the discovery of new compounds or biochemical pathways that have industrial or pharmaceutical applications. 3. Genomic Insights: Studying the genome of M. palustre can provide insights into the evolutionary adaptations that allow it to survive in wetland environments. This can enhance our understanding of microbial evolution and the genetic basis of environmental adaptability. In summary, Mycobacterium palustre is a noteworthy organism due to its environmental niche, potential applications in bioremediation, and the unique metabolic and genetic traits it may possess. Its study not only contributes to our understanding of microbial ecology but also holds promise for practical applications in environmental management and biotechnology.

Mycobacterium palustre is a fascinating species of the genus Mycobacterium, known for its unique ecological niche and potential biotechnological applications. This organism was first isolated from a freshwater environment, highlighting its adaptability to aquatic habitats, which is relatively uncommon among mycobacteria that are typically associated with terrestrial environments or human pathogens. One of the most interesting aspects of M. palustre is its ability to degrade complex organic compounds, making it a valuable candidate for bioremediation efforts. Its enzymatic capabilities allow it to break down pollutants in aquatic systems, contributing to the detoxification of contaminated water bodies. This characteristic positions M. palustre as a potential tool in environmental microbiology, particularly in the cleanup of oil spills and other environmental disasters. Additionally, M. palustre has garnered attention for its unique lipid composition, which includes mycolic acids that are characteristic of the Mycobacterium genus. These lipids play a crucial role in the organism's resistance to environmental stressors, including desiccation and antimicrobial agents, making it a subject of interest in studies related to microbial survival strategies. Furthermore, the genomic analysis of M. palustre has revealed insights into its metabolic pathways and genetic adaptations that enable it to thrive in its specific habitat. This information can be invaluable for researchers studying microbial ecology and evolution, as well as for those exploring the genetic basis of biodegradation processes. In summary, Mycobacterium palustre stands out due to its ecological significance, potential for bioremediation, and unique biochemical properties, making it a noteworthy subject for ongoing research in environmental and microbial sciences.

Taxonomy

Superkingdom: Bacteria

Phylum: Actinomycetota

Class: Actinomycetes

Order: Mycobacteriales

Family: Mycobacteriaceae

Genus: Mycobacterium

Species: Mycobacterium palustre

NCBI ID

153971

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCF/025/821/485/GCF_025821485.1_ASM2582148v1

File for sequence-based predictions:
GCF_025821485.1_ASM2582148v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The organism Mycobacterium palustre is a less commonly studied member of the Mycobacterium genus, which is primarily known for its pathogenic species such as Mycobacterium tuberculosis. While specific clinical implications of M. palustre are not as well-documented, it is important to consider its potential role in human health and disease. Mycobacterium species are known for their ability to cause infections in immunocompromised individuals, and there is a possibility that M. palustre could exhibit similar pathogenicity under certain conditions. In terms of antimicrobial resistance, Mycobacterium species are notorious for their ability to develop resistance to multiple drugs, which complicates treatment options. Although specific resistance mechanisms for M. palustre have not been extensively characterized, the general trend of resistance in the genus raises concerns about its management in clinical settings. Furthermore, the interaction of M. palustre with the human immune system may involve various immune evasion strategies, similar to other mycobacteria, which can include the modulation of host immune responses and the ability to survive within macrophages. While there are no well-documented outbreaks or infections specifically attributed to M. palustre, its close relation to more pathogenic mycobacteria warrants attention in clinical microbiology. Continued research is necessary to fully understand the implications of M. palustre in human health, including any potential applications in probiotics, vaccines, or therapeutics.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Mycobacterium palustre is primarily associated with wetland ecosystems, particularly in areas characterized by peatlands and marshes. This microorganism thrives in environments that are rich in organic matter and exhibit high moisture levels, making it well-suited for the unique conditions found in these biomes. In these wetland habitats, Mycobacterium palustre plays a crucial role in the decomposition of organic materials, contributing to nutrient cycling and the overall health of the ecosystem. Its ability to break down complex organic compounds helps in the formation of humus, which is vital for soil fertility. Additionally, Mycobacterium palustre is known to engage in symbiotic relationships with various plant species, aiding in the uptake of nutrients and enhancing plant growth. This interaction not only benefits the plants but also supports the microbial community within the wetland environment, fostering a diverse ecosystem. The organism exhibits remarkable environmental adaptation capabilities, allowing it to survive in conditions that may be inhospitable to other microorganisms. Its presence in these biomes is indicative of a healthy wetland ecosystem, where it contributes to the maintenance of biodiversity and the stability of the habitat. Overall, Mycobacterium palustre is an essential component of wetland biomes, influencing both the physical and biological processes that sustain these unique environments.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Mycobacterium palustre has shown potential in various industrial applications, particularly in the fields of biotechnology and waste management. This organism is known for its ability to thrive in wetland environments, which positions it as a candidate for biodegradation processes, particularly in the breakdown of complex organic pollutants found in wastewater. Its enzymatic capabilities allow it to degrade a range of contaminants, making it valuable for waste treatment facilities aiming to reduce environmental impact. In the realm of biofuel production, Mycobacterium palustre may contribute to the conversion of biomass into biofuels through fermentation processes. By utilizing its metabolic pathways, this microorganism can potentially enhance the efficiency of biofuel production from organic waste materials, thus supporting sustainable energy initiatives. Furthermore, there is growing interest in the pharmaceutical development sector, where Mycobacterium palustre could be explored for its unique metabolic products. These metabolites may have applications in drug discovery, particularly in the development of new antibiotics or other therapeutic agents, given the organism's resilience and adaptability in challenging environments. Overall, the diverse capabilities of Mycobacterium palustre in biodegradation, fermentation, and potential pharmaceutical applications highlight its significance in addressing environmental challenges and contributing to sustainable industrial practices.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 9

LLM predicted phenotypes: 3

Phenotype	High-quality annotation	google/gemini-pro	meta-llama/llama-3-70b-instruct:nitro	google/palm-2-chat-bison-32k	google/gemini-pro-1.5	google/gemma-7b-it	mistralai/mistral-7b-instruct	google/gemini-flash-1.5	mistralai/mixtral-8x7b-instruct:nitro	perplexity/llama-3-sonar-small-32k-chat	openchat/openchat-7b	anthropic/claude-3-haiku:beta	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	openai/gpt-4	openai/gpt-4	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	anthropic/claude-3.5-sonnet	anthropic/claude-3.5-sonnet	openai/gpt-4o	openai/gpt-4o	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct	meta-llama/llama-3-8b-instruct:nitro	meta-llama/llama-3-8b-instruct:nitro
Motility	FALSE	false ✓	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Gram staining	gram stain positive	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain negative ✗	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain variable ✗	N/A	gram stain positive ✓	N/A	N/A
Aerophilicity	aerobic	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A	N/A	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	N/A	false	true	false	true	true	true	true	false	true	false	true	false	false	false	false	false	false	false	false	true	true	true	true	true	true
Biofilm formation	N/A	true	true	true	true	true	true	true	true	true	true	true	true	true	false	false	true	true	true	true	true	true	true	true	true	true
Animal pathogenicity	TRUE	true ✓	false ✗	true ✓	true ✓	true ✓	true ✓	true ✓	false ✗	true ✓	false ✗	true ✓	false ✗	false ✗	false ✗	false ✗	true ✓	true ✓	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	true ✓	true ✓
Biosafety level	biosafety level 2	biosafety level 2 ✓	biosafety level 1 ✗	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 3 ✗	biosafety level 2 ✓	biosafety level 1 ✗	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 1 ✗	biosafety level 1 ✗	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 2 ✓
Health association	N/A	true	true	true	true	true	true	true	true	true	true	true	false	false	false	false	true	true	true	true	true	true	false	false	true	true
Host association	TRUE	true ✓	true ✓	true ✓	true ✓	false ✗	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	false ✗	false ✗	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗
Hemolysis	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	bacillus	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓

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