Staphylococcus argensis

General Information

Staphylococcus argensis is a relatively newly identified species within the genus Staphylococcus. This microorganism is particularly interesting due to its unique genetic makeup and potential clinical significance. One of the most notable features of S. argensis is its antibiotic resistance profile. It has been found to possess genes that confer resistance to multiple classes of antibiotics, making it a subject of intense study in the field of antimicrobial resistance. This characteristic is crucial for understanding the mechanisms of resistance and developing new strategies to combat bacterial infections. Additionally, S. argensis has been isolated from various environmental sources, indicating its versatility and adaptability. This adaptability suggests that the organism can survive in diverse conditions, which may provide insights into its metabolic pathways and ecological roles. From a research perspective, S. argensis is valuable for studying horizontal gene transfer. The presence of mobile genetic elements in its genome suggests that it can acquire and disseminate resistance genes to other bacteria, contributing to the spread of antibiotic resistance. Overall, Staphylococcus argensis stands out due to its clinical relevance, genetic diversity, and ecological adaptability, making it a significant organism for ongoing and future microbiological research.

Staphylococcus argensis is a fascinating species within the Staphylococcus genus, notable for its unique ecological niche and potential applications in biotechnology. This organism is primarily isolated from marine environments, particularly associated with fish and other aquatic organisms, which sets it apart from many of its terrestrial relatives. Its ability to thrive in saline conditions makes it an interesting subject for studies on osmoregulation and adaptation mechanisms in extreme environments. One of the most intriguing aspects of S. argensis is its potential for producing bioactive compounds. Research has indicated that this species may synthesize antimicrobial peptides, which could be valuable in the development of new antibiotics, especially in the face of rising antibiotic resistance. The exploration of these compounds could lead to significant advancements in pharmaceutical applications. Additionally, S. argensis has been studied for its role in the marine ecosystem, particularly in the context of its interactions with other microorganisms and its contribution to the microbial community structure. Understanding these interactions can provide insights into nutrient cycling and the overall health of marine environments. In summary, Staphylococcus argensis stands out due to its marine habitat, potential biotechnological applications, and its role in marine ecology, making it a valuable organism for further research in microbiology and environmental science.

Taxonomy

Superkingdom: Bacteria

Phylum: Bacillota

Class: Bacilli

Order: Bacillales

Family: Staphylococcaceae

Genus: Staphylococcus

Species: Staphylococcus argensis

NCBI ID

1607738

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCF/007/682/245/GCF_007682245.1_ASM768224v1

File for sequence-based predictions:
GCF_007682245.1_ASM768224v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The organism Staphylococcus argensis is a coagulase-negative staphylococcus (CNS) that has been increasingly recognized for its potential clinical implications. It is primarily associated with infections in immunocompromised patients, particularly those with indwelling medical devices. Clinical relevance includes its role in nosocomial infections, where it can be a significant pathogen in bloodstream infections and endocarditis. The organism exhibits pathogenicity through its ability to form biofilms, which enhances its adherence to medical devices and contributes to its virulence. In terms of antimicrobial resistance, S. argensis has shown resistance to multiple antibiotics, including methicillin, which complicates treatment options. This resistance is often attributed to the acquisition of resistance genes and the ability to form biofilms that protect the bacteria from antibiotic action. Moreover, S. argensis has been implicated in outbreaks associated with contaminated medical equipment, highlighting its importance in hospital settings. Its interaction with the human body involves evasion of the immune response, where it can produce factors that inhibit phagocytosis and modulate inflammatory responses. While S. argensis is not commonly used in medical applications, understanding its behavior and resistance mechanisms is crucial for developing effective treatment strategies and infection control measures in healthcare environments.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Staphylococcus argensis is a bacterium commonly associated with various habitats and environments that reflect its adaptability and ecological roles. This microorganism is primarily found in human-associated environments, particularly on the skin and mucous membranes, where it plays a significant role in the microbiome of healthy individuals. Its presence is crucial for maintaining skin health and preventing colonization by pathogenic organisms, showcasing its role in commensalism. In addition to its human associations, Staphylococcus argensis can thrive in natural environments such as soil and water, where it contributes to nutrient cycling and organic matter decomposition. This bacterium exhibits remarkable environmental adaptability, allowing it to survive in varying conditions, including changes in temperature, pH, and salinity. Notably, Staphylococcus argensis can engage in symbiotic relationships with other microorganisms, enhancing the overall microbial diversity and stability of its habitats. Its ability to form biofilms on surfaces, including medical devices, underscores its ecological significance and potential implications for human health. Overall, Staphylococcus argensis exemplifies the intricate balance of microbial life within its associated biomes, highlighting its importance in both ecological and clinical contexts.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Staphylococcus argensis has shown potential in various industrial applications primarily due to its unique metabolic capabilities. One notable area is in biotechnology, where S. argensis can be utilized in fermentation processes to produce valuable metabolites. For instance, it has been studied for its ability to ferment certain sugars, leading to the production of organic acids that can serve as precursors for bioplastics or food additives. In the realm of waste management, S. argensis has demonstrated effectiveness in biodegradation processes, particularly in the breakdown of complex organic materials. This capability can be harnessed in the treatment of wastewater, where the organism can help in the degradation of pollutants, thus contributing to cleaner effluents. Moreover, the organism's enzymatic activity is of interest in pharmaceutical development. S. argensis can produce specific enzymes that may be useful in the synthesis of pharmaceutical compounds, enhancing the efficiency of drug production processes. Additionally, there is potential for S. argensis in biofuel production. Its metabolic pathways can be explored for the conversion of biomass into biofuels, particularly through fermentation of lignocellulosic materials, which could lead to sustainable energy solutions. Overall, Staphylococcus argensis presents a multifaceted opportunity for various industries, particularly in enhancing processes related to biotechnology, waste management, pharmaceuticals, and biofuels.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 10

LLM predicted phenotypes: 3

Phenotype	High-quality annotation	google/gemini-flash-1.5	google/gemini-pro-1.5	google/gemini-pro	google/gemini-pro	meta-llama/llama-3-70b-instruct:nitro	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	meta-llama/llama-3-8b-instruct:nitro	perplexity/llama-3-sonar-small-32k-chat	anthropic/claude-3-haiku:beta	anthropic/claude-3.5-sonnet	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	mistralai/mixtral-8x7b-instruct:nitro	mistralai/mixtral-8x7b-instruct:nitro	openai/gpt-4	openai/gpt-4	openai/gpt-4o	openai/gpt-4o	mistralai/mistral-7b-instruct	mistralai/mistral-7b-instruct	google/gemma-7b-it	google/gemma-7b-it	openchat/openchat-7b	openchat/openchat-7b	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct
Motility	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Gram staining	gram stain positive	gram stain positive ✓	gram stain positive ✓	N/A	gram stain positive ✓	gram stain positive ✓	N/A	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓
Aerophilicity	aerobic	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	N/A	N/A	N/A	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Biofilm formation	N/A	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	false	false	true	true	true	true
Animal pathogenicity	N/A	true	true	true	true	true	true	true	true	true	true	false	true	true	false	false	true	true	true	true	true	true	true	true	true	true	true	true	false	false
Biosafety level	biosafety level 2	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 1 ✗	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 1 ✗	biosafety level 1 ✗	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 2 ✓	biosafety level 1 ✗	biosafety level 1 ✗
Health association	N/A	true	true	true	true	true	false	false	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	false	false
Host association	FALSE	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	gamma	beta ✗	beta ✗	gamma ✓	gamma ✓	N/A	gamma ✓	gamma ✓	beta ✗	beta ✗	alpha ✗	N/A	N/A	N/A	N/A	N/A	beta ✗	beta ✗	beta ✗	beta ✗	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	coccus	coccus ✓	coccus ✓	coccus ✓	coccus ✓	coccus ✓	coccus ✓	coccus ✓	coccus ✓	coccus ✓	coccus ✓	coccus ✓	coccus ✓	coccus ✓	coccus ✓	coccus ✓	coccus ✓	coccus ✓	coccus ✓	coccus ✓	coccus ✓	coccus ✓	bacillus ✗	bacillus ✗	coccus ✓	coccus ✓	coccus ✓	coccus ✓	coccus ✓	coccus ✓

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