Pseudoalteromonas phenolica

General Information

Pseudoalteromonas phenolica is a marine bacterium that has garnered significant interest due to its production of bioactive compounds. This microorganism is particularly notable for its ability to produce phenolic substances, which have been shown to possess antimicrobial and antifouling properties. These compounds are of great interest in the development of new antibiotics and antifouling agents, which are crucial in both medical and marine industries. One of the most fascinating aspects of P. phenolica is its potential role in bioremediation. The bacterium has been studied for its ability to degrade various pollutants, making it a valuable candidate for cleaning up contaminated marine environments. Additionally, its production of extracellular enzymes further enhances its utility in breaking down complex organic materials. From a research perspective, Pseudoalteromonas phenolica serves as a model organism for studying marine microbial ecology and the interactions between marine bacteria and their environment. Its unique metabolic capabilities and the production of secondary metabolites make it an excellent subject for exploring the chemical diversity of marine microorganisms. In summary, Pseudoalteromonas phenolica stands out due to its bioactive compound production, potential applications in bioremediation, and its role in advancing our understanding of marine microbial ecosystems. These characteristics make it a valuable organism for both applied and fundamental research in marine microbiology.

Pseudoalteromonas phenolica is a marine bacterium that has garnered interest due to its unique biochemical capabilities and ecological significance. This organism is known for its ability to produce a variety of bioactive compounds, including phenolic compounds, which have potential applications in pharmaceuticals and biotechnology. The production of these compounds is particularly noteworthy as they exhibit antimicrobial and antifouling properties, making P. phenolica a candidate for developing natural antifouling agents for marine applications. Another fascinating aspect of Pseudoalteromonas phenolica is its role in the marine ecosystem. It is often found in association with marine invertebrates and contributes to the degradation of organic matter in marine environments. This ability to break down complex organic materials highlights its importance in nutrient cycling and maintaining the health of marine ecosystems. Research into the metabolic pathways of P. phenolica could provide insights into bioremediation strategies and the development of sustainable practices in marine resource management. Furthermore, the genetic and genomic studies of Pseudoalteromonas phenolica have revealed a rich diversity of genes associated with secondary metabolite production, which opens avenues for bioprospecting. The potential to harness these genetic resources for the discovery of novel compounds underscores the value of this organism in the field of natural product research. Overall, Pseudoalteromonas phenolica stands out as a remarkable organism with significant implications for environmental science, biotechnology, and pharmaceutical development.

Taxonomy

Superkingdom: Bacteria

Phylum: Pseudomonadota

Class: Gammaproteobacteria

Order: Alteromonadales

Family: Pseudoalteromonadaceae

Genus: Pseudoalteromonas

Species: Pseudoalteromonas phenolica

NCBI ID

161398

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/444/405/GCF_001444405.1_ASM144440v1

File for sequence-based predictions:
GCF_001444405.1_ASM144440v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The organism Pseudoalteromonas phenolica is a marine bacterium that has garnered attention for its potential clinical implications in various fields. While primarily known for its presence in marine environments, it has been studied for its antimicrobial properties, which may have applications in developing new antibiotics. This is particularly relevant given the rising concern over antimicrobial resistance in pathogenic bacteria. In terms of human health, Pseudoalteromonas phenolica has been investigated for its ability to produce bioactive compounds that could be beneficial in therapeutic contexts. These compounds may exhibit antimicrobial and antiviral activities, making them candidates for future drug development. However, the clinical relevance of Pseudoalteromonas phenolica in terms of direct pathogenicity or disease association remains limited. There is currently no well-documented evidence linking this organism to specific infections in humans. Its role in the human microbiome is not fully understood, and further research is needed to elucidate any potential interactions with the human immune system. Overall, while Pseudoalteromonas phenolica shows promise in the realm of biotechnology and pharmaceutical applications, its direct implications for human health and disease are still under investigation.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Pseudoalteromonas phenolica is a marine bacterium commonly found in coastal waters and marine sediments. This organism thrives in environments characterized by high salinity and varying temperatures, often associated with nutrient-rich conditions. Its ecological niche is primarily within the benthic zone, where it plays a significant role in the degradation of organic matter, contributing to nutrient cycling in the marine ecosystem. In terms of interactions with its surroundings, Pseudoalteromonas phenolica is known for its ability to produce bioactive compounds, which can inhibit the growth of competing microorganisms. This characteristic not only aids in its survival but also influences the microbial community structure in its habitat. Furthermore, it has been observed to engage in symbiotic relationships with various marine organisms, potentially providing benefits such as antimicrobial protection. The adaptability of Pseudoalteromonas phenolica to different marine environments highlights its ecological importance. It can be found in estuaries, where freshwater meets saltwater, and in deep-sea environments, showcasing its versatility. Overall, this microorganism is a vital component of the marine biome, contributing to both ecological balance and the health of marine ecosystems.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Pseudoalteromonas phenolica has shown significant potential in various industrial applications. One of the most notable areas is in biotechnology, where it is utilized for its ability to produce a range of bioactive compounds. These compounds can be harnessed for their antimicrobial and antifouling properties, making them valuable in the development of new materials and coatings. In the realm of waste management, Pseudoalteromonas phenolica has demonstrated capabilities in biodegradation, particularly in the breakdown of complex organic pollutants. This makes it a candidate for bioremediation processes aimed at cleaning up contaminated environments, such as oil spills or heavy metal-laden sites. Furthermore, this microorganism is being explored for its role in biofuel production. Its metabolic pathways can be leveraged in fermentation processes to convert biomass into biofuels, contributing to sustainable energy solutions. In pharmaceutical development, the bioactive metabolites produced by Pseudoalteromonas phenolica are of interest for their potential therapeutic applications. Research is ongoing to isolate and characterize these compounds for use in drug formulation. Overall, Pseudoalteromonas phenolica exemplifies the versatility of marine microorganisms in addressing industrial challenges through innovative applications in biotechnology, waste management, biofuel production, and pharmaceuticals.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 9

LLM predicted phenotypes: 4

Phenotype	High-quality annotation	google/gemini-flash-1.5	google/gemini-pro	mistralai/mistral-7b-instruct	meta-llama/llama-3-70b-instruct:nitro	meta-llama/llama-3-8b-instruct:nitro	openchat/openchat-7b	openai/gpt-4	openai/gpt-4	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	google/gemini-pro-1.5	google/gemini-pro-1.5	google/gemma-7b-it	google/gemma-7b-it	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	mistralai/mixtral-8x7b-instruct:nitro	mistralai/mixtral-8x7b-instruct:nitro	perplexity/llama-3-sonar-small-32k-chat	perplexity/llama-3-sonar-small-32k-chat	openai/gpt-4o	openai/gpt-4o	anthropic/claude-3.5-sonnet	anthropic/claude-3.5-sonnet	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct	anthropic/claude-3-haiku:beta	anthropic/claude-3-haiku:beta
Motility	TRUE	true ✓	true ✓	true ✓	true ✓	true ✓	false ✗	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓
Gram staining	gram stain negative	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain variable ✗	N/A	gram stain negative ✓
Aerophilicity	aerobic	N/A	N/A	N/A	N/A	N/A	N/A	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	true ✗	false ✓	true ✗	true ✗	true ✗	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗
Biofilm formation	N/A	true	true	false	true	true	false	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Animal pathogenicity	N/A	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false
Biosafety level	biosafety level 1	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓
Health association	N/A	false	true	false	false	true	false	true	true	true	true	true	true	false	false	false	false	false	false	true	true	true	true	true	true	true	true	false	false	false	false
Host association	FALSE	false ✓	false ✓	true ✗	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	N/A	gamma	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	bacillus	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	spirillum ✗	spirillum ✗	bacillus ✓	bacillus ✓

Back to Search