Mycobacterium lacus

General Information

Mycobacterium lacus is a species of bacteria within the genus Mycobacterium, which is known for its diverse and often pathogenic members. This particular species is notable for its environmental resilience and ability to thrive in aquatic habitats, which is reflected in its name, lacus, meaning 'lake' in Latin. One of the most interesting aspects of Mycobacterium lacus is its potential role in bioremediation. Due to its robust nature, it can survive in various water bodies, including those contaminated with pollutants. This makes it a candidate for studies focused on the breakdown and removal of environmental contaminants, particularly in aquatic ecosystems. Additionally, Mycobacterium lacus has been studied for its unique lipid composition. The cell wall of this bacterium contains complex lipids that contribute to its durability and resistance to harsh conditions. These lipids are of interest not only for understanding the organism's biology but also for potential applications in biotechnology and medicine. From a research perspective, Mycobacterium lacus provides valuable insights into the adaptation mechanisms of mycobacteria in non-host environments. Studying this organism helps scientists understand how mycobacteria can persist outside of their typical host organisms, which has implications for controlling and preventing infections caused by related pathogenic species. In summary, Mycobacterium lacus is a fascinating bacterium due to its environmental resilience, potential in bioremediation, unique lipid composition, and the insights it offers into mycobacterial adaptation mechanisms.

Mycobacterium lacus is a fascinating species within the genus Mycobacterium, known for its unique ecological niche and potential applications in biotechnology and environmental science. This organism was first isolated from freshwater environments, highlighting its adaptability to aquatic habitats. What makes M. lacus particularly interesting is its ability to thrive in diverse and often extreme conditions, which may provide insights into microbial resilience and adaptation mechanisms. One of the notable characteristics of M. lacus is its lipid-rich cell wall, which is a hallmark of the Mycobacterium genus. This feature not only contributes to its survival in harsh environments but also makes it a subject of interest for researchers studying the role of lipids in microbial physiology and pathogenicity. The unique composition of its cell wall may also have implications for the development of novel antimicrobial agents, as it presents a different target compared to more common bacterial pathogens. Furthermore, M. lacus has been studied for its potential in bioremediation processes. Its ability to degrade complex organic compounds suggests that it could play a role in the detoxification of polluted water bodies. This aspect of M. lacus positions it as a valuable organism in environmental microbiology, particularly in efforts to address water quality issues and the management of contaminated ecosystems. In summary, Mycobacterium lacus stands out due to its ecological versatility, unique cell wall structure, and potential applications in bioremediation, making it a significant subject of study in both microbiological and environmental research.

Taxonomy

Superkingdom: Bacteria

Phylum: Actinomycetota

Class: Actinomycetes

Order: Mycobacteriales

Family: Mycobacteriaceae

Genus: Mycobacterium

Species: Mycobacterium lacus

NCBI ID

169765

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCA/010/731/535/GCA_010731535.1_ASM1073153v1

File for sequence-based predictions:
GCA_010731535.1_ASM1073153v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The organism Mycobacterium lacus is a member of the Mycobacterium genus, which is known for its clinical significance in human health. While specific studies on Mycobacterium lacus are limited, it is hypothesized to share characteristics with other mycobacteria, particularly in its potential role in infections and disease associations. Mycobacteria are often associated with chronic infections and can lead to conditions such as tuberculosis and leprosy, although M. lacus has not been definitively linked to these diseases. Pathogenicity is a key concern with mycobacteria, as they can evade the immune response through various mechanisms, including the modulation of host cell signaling pathways and the ability to survive within macrophages. This immune evasion can lead to persistent infections that are difficult to treat. In terms of antimicrobial resistance, mycobacteria are known for their ability to develop resistance to multiple drugs, complicating treatment options. While specific resistance patterns for M. lacus are not well-documented, the potential for multidrug resistance in related species raises concerns for public health. There is also interest in the potential medical applications of mycobacteria, including the use of certain species as probiotics or in vaccines for enhancing immune responses. However, the specific applications of M. lacus in these areas remain to be explored. Overall, while Mycobacterium lacus may not be as well-studied as other mycobacterial species, its classification within this genus suggests it could have important implications for human health, particularly in the context of infections, immune evasion, and antimicrobial resistance.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Mycobacterium lacus is primarily associated with freshwater ecosystems, particularly in environments such as lakes, ponds, and slow-moving rivers. This microorganism thrives in the sediment layers and water column of these habitats, where it plays a crucial role in nutrient cycling and organic matter decomposition. Its presence is often linked to the breakdown of complex organic compounds, contributing to the overall health of the aquatic ecosystem. In these freshwater biomes, Mycobacterium lacus exhibits notable interactions with its surroundings. It can engage in symbiotic relationships with other microorganisms, such as algae and protozoa, enhancing nutrient availability and promoting biodiversity. Additionally, it may participate in biofilm formation, which provides a protective environment for itself and other microbial communities, facilitating nutrient exchange and enhancing resilience against environmental stressors. Furthermore, Mycobacterium lacus demonstrates remarkable environmental adaptation capabilities, allowing it to survive in varying conditions of temperature, pH, and nutrient availability. This adaptability is essential for its persistence in dynamic aquatic environments, where fluctuations in water quality can occur due to natural processes or anthropogenic influences. Overall, Mycobacterium lacus is a vital component of its biome, contributing to ecological balance and the maintenance of water quality in freshwater habitats.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Mycobacterium lacus has shown potential in various industrial applications primarily due to its unique metabolic capabilities. One of the notable areas is in biotechnology, where Mycobacterium lacus can be utilized in the biodegradation of complex organic compounds, making it valuable for waste management processes. This organism has demonstrated the ability to break down pollutants in contaminated environments, contributing to the remediation of hazardous waste sites. In the realm of biofuel production, Mycobacterium lacus can be involved in the fermentation of biomass, converting organic materials into biofuels such as ethanol or biodiesel. Its metabolic pathways allow for the efficient conversion of sugars and other substrates into energy-rich products, which can be harnessed for sustainable energy solutions. Additionally, Mycobacterium lacus has potential applications in pharmaceutical development. Its unique biochemical properties may lead to the discovery of novel compounds that can be used in drug formulation or as bioactive agents. The organism's ability to produce specific enzymes can also be harnessed for enzyme production, which is crucial in various industrial processes, including food processing and biocatalysis. Overall, Mycobacterium lacus represents a promising candidate for multiple industries, particularly in waste management, biofuel production, and pharmaceutical development, where its metabolic versatility can be effectively utilized.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 9

LLM predicted phenotypes: 3

Phenotype	High-quality annotation	google/gemini-pro	mistralai/mistral-7b-instruct	meta-llama/llama-3-70b-instruct:nitro	anthropic/claude-3.5-sonnet	google/gemma-7b-it	perplexity/llama-3-sonar-small-32k-chat	microsoft/phi-3-mini-128k-instruct	anthropic/claude-3-haiku:beta	google/gemini-flash-1.5	google/gemini-flash-1.5	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	meta-llama/llama-3-8b-instruct:nitro	openai/gpt-4	openai/gpt-4	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	google/gemini-pro-1.5	google/gemini-pro-1.5	mistralai/mixtral-8x7b-instruct:nitro	mistralai/mixtral-8x7b-instruct:nitro	openchat/openchat-7b	openchat/openchat-7b	openai/gpt-4o	openai/gpt-4o
Motility	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Gram staining	gram stain positive	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain variable ✗	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain variable ✗
Aerophilicity	aerobic	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	N/A	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	N/A	false	true	false	false	true	true	true	true	true	true	false	false	false	false	true	false	false	false	false	false	false	false	false	true	true	true	true
Biofilm formation	N/A	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	false	false	true	true	true	true	true	true	true	true	true	true
Animal pathogenicity	TRUE	true ✓	true ✓	true ✓	false ✗	true ✓	true ✓	false ✗	true ✓	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓	false ✗	false ✗	false ✗	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓
Biosafety level	biosafety level 1	biosafety level 2 ✗	biosafety level 3 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 3 ✗	biosafety level 3 ✗	biosafety level 2 ✗	biosafety level 3 ✗	biosafety level 3 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗
Health association	N/A	true	true	true	true	true	true	false	true	true	true	false	false	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Host association	TRUE	true ✓	true ✓	true ✓	true ✓	false ✗	true ✓	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	bacillus	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	coccus ✗	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓

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