Vibrio kanaloae

General Information

Vibrio kanaloae is a fascinating marine bacterium that belongs to the genus Vibrio. This organism is particularly interesting due to its bioluminescent properties, which make it a subject of significant research in marine biology and biotechnology. The bioluminescence of V. kanaloae is not only a captivating natural phenomenon but also has potential applications in environmental monitoring and bioengineering. One of the unique aspects of V. kanaloae is its ability to thrive in various marine environments, including both coastal and open ocean waters. This adaptability makes it an excellent model organism for studying marine microbial ecology and the impact of environmental changes on microbial communities. From a genetic perspective, V. kanaloae possesses a diverse array of genes that contribute to its metabolic versatility. This includes genes involved in the degradation of complex organic compounds, which highlights its role in nutrient cycling within marine ecosystems. The organism's genome also reveals insights into its interactions with other marine organisms, including symbiotic relationships with marine invertebrates. In addition to its ecological significance, V. kanaloae has potential biotechnological applications. Its bioluminescent properties can be harnessed for the development of biosensors, which can be used to detect pollutants and other environmental stressors in marine environments. Furthermore, the study of its metabolic pathways can lead to the discovery of novel enzymes and bioactive compounds with industrial and pharmaceutical applications. Overall, Vibrio kanaloae is a valuable organism for scientific research due to its bioluminescence, metabolic diversity, and ecological importance. Its study not only enhances our understanding of marine microbial life but also opens up new avenues for biotechnological innovation.

Vibrio kanaloae is a fascinating marine bacterium that was first isolated from the waters of Hawaii. This organism is particularly interesting due to its unique ecological niche and its potential applications in biotechnology. It thrives in warm, saline environments, which makes it an important player in marine ecosystems, particularly in nutrient cycling and the degradation of organic matter. One of the most notable characteristics of Vibrio kanaloae is its ability to produce bioluminescence, a trait that is not only captivating but also serves various ecological functions, such as attracting prey or deterring predators. This bioluminescent property has garnered attention for potential applications in bioluminescent imaging and as a reporter gene in molecular biology studies. Additionally, Vibrio kanaloae has been studied for its antimicrobial properties, which could lead to the discovery of new natural antibiotics. The organism's ability to produce secondary metabolites that inhibit the growth of pathogenic bacteria makes it a valuable candidate for research in the field of pharmaceutical development. Furthermore, the study of Vibrio kanaloae contributes to our understanding of marine biodiversity and the evolutionary adaptations of bacteria in extreme environments. Its unique genetic makeup and metabolic pathways are of great interest to researchers exploring the limits of life on Earth and the potential for life in extraterrestrial environments. In summary, Vibrio kanaloae stands out not only for its ecological significance but also for its potential contributions to biotechnology and medicine, making it a valuable subject for ongoing research.

Taxonomy

Superkingdom: Bacteria

Phylum: Pseudomonadota

Class: Gammaproteobacteria

Order: Vibrionales

Family: Vibrionaceae

Genus: Vibrio

Species: Vibrio kanaloae

NCBI ID

170673

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCF/001/995/825/GCF_001995825.2_ASM199582v2

File for sequence-based predictions:
GCF_001995825.2_ASM199582v2_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The bacterium Vibrio kanaloae is a marine organism that has been associated with various clinical implications, particularly in the context of infections linked to seafood consumption. It is known to inhabit warm coastal waters and can be found in raw or undercooked seafood, which poses a risk for gastroenteritis in humans. Clinical cases have reported symptoms such as diarrhea, abdominal cramps, and vomiting, particularly in immunocompromised individuals or those with underlying health conditions. One of the significant concerns regarding Vibrio kanaloae is its potential for pathogenicity. While it is not as widely recognized as other Vibrio species, such as Vibrio cholerae, its ability to cause infections highlights the need for awareness in clinical settings, especially in regions where seafood is a dietary staple. In terms of antimicrobial resistance, there is limited data available, but like many Vibrio species, Vibrio kanaloae may exhibit resistance to certain antibiotics, complicating treatment options for infected patients. This underscores the importance of monitoring and understanding the resistance patterns of this organism. Furthermore, the organism's interaction with the human body involves evasion of the immune response, which may contribute to its pathogenic potential. Understanding these mechanisms is crucial for developing effective therapeutic strategies. Overall, while Vibrio kanaloae may not be as prominent in clinical literature as other pathogens, its association with seafood-related infections and potential for antimicrobial resistance warrant further investigation and awareness in public health and clinical microbiology.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Vibrio kanaloae is a marine bacterium primarily associated with coastal waters and brackish environments. This microorganism thrives in areas where salinity levels fluctuate, often found in estuaries and lagoons. Its ecological niche is characterized by a preference for warmer temperatures, typically between 20°C and 30°C, which aligns with the conditions of tropical and subtropical marine ecosystems. In these marine biomes, Vibrio kanaloae plays a significant role in nutrient cycling, particularly in the breakdown of organic matter. This bacterium is known for its ability to degrade various organic compounds, contributing to the overall health of the ecosystem by facilitating the recycling of nutrients. Additionally, Vibrio kanaloae exhibits notable interactions with other marine organisms. It can form symbiotic relationships with certain fish species, where it may provide benefits such as enhanced digestion or protection against pathogens. This symbiosis highlights the importance of Vibrio kanaloae in maintaining the balance of marine food webs. Furthermore, this bacterium is adapted to survive in environments with varying oxygen levels, showcasing its versatility. It can thrive in both aerobic and anaerobic conditions, allowing it to occupy diverse ecological niches within its marine habitat. Overall, Vibrio kanaloae is a vital component of its ecosystem, influencing both the biological and chemical dynamics of the environments it inhabits.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Vibrio kanaloae has shown potential in various industrial applications, particularly in the fields of biotechnology and waste management. This organism is known for its ability to thrive in marine environments, which makes it a candidate for applications in biodegradation and bioremediation of marine pollutants. Its enzymatic activities can facilitate the breakdown of complex organic compounds, thus aiding in the detoxification of contaminated water bodies. In the realm of biofuel production, Vibrio kanaloae may contribute to the fermentation processes that convert biomass into biofuels. The organism's metabolic pathways can be harnessed to enhance the efficiency of fermentation, potentially leading to higher yields of bioethanol or other biofuels from marine biomass. Moreover, there is a growing interest in the pharmaceutical industry regarding the bioactive compounds produced by Vibrio kanaloae. These compounds may have antimicrobial properties, which could be explored for the development of new antibiotics or other therapeutic agents. The organism's ability to produce enzymes can also be utilized in various biotechnological applications, including the production of specialty chemicals and biocatalysts. Overall, Vibrio kanaloae presents a promising avenue for research and development in waste management, biofuel production, and pharmaceutical development, with its unique capabilities in biodegradation, fermentation, and enzyme production.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 10

LLM predicted phenotypes: 3

Phenotype	High-quality annotation	meta-llama/llama-3-70b-instruct:nitro	google/gemini-pro	google/gemini-flash-1.5	openai/gpt-4o	openai/gpt-4o	anthropic/claude-3.5-sonnet	microsoft/phi-3-mini-128k-instruct	anthropic/claude-3-haiku:beta	mistralai/mistral-7b-instruct	meta-llama/llama-3-8b-instruct:nitro	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	mistralai/mixtral-8x7b-instruct:nitro	mistralai/mixtral-8x7b-instruct:nitro	openai/gpt-4	openai/gpt-4	google/gemini-pro-1.5	google/gemini-pro-1.5	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	perplexity/llama-3-sonar-small-32k-chat	perplexity/llama-3-sonar-small-32k-chat	openchat/openchat-7b	openchat/openchat-7b	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b
Motility	TRUE	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓
Gram staining	gram stain negative	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	N/A	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓
Aerophilicity	aerobic	facultatively anaerobic ✗	N/A	N/A	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	N/A	N/A	N/A	N/A	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗
Biofilm formation	N/A	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Animal pathogenicity	FALSE	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗
Biosafety level	biosafety level 1	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗
Health association	N/A	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Host association	FALSE	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	N/A	beta	gamma	beta	beta	beta	beta	alpha	beta	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	bacillus	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	spirillum ✗	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	coccus ✗	coccus ✗	bacillus ✓	bacillus ✓

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