Campylobacter ornithocola

General Information

Campylobacter ornithocola is a relatively recent addition to the genus Campylobacter, which is well-known for its association with gastrointestinal diseases in humans and animals. This particular species was first isolated from wild bird populations, specifically from the cloacal swabs of birds. What makes C. ornithocola particularly interesting is its host specificity and ecological niche. Unlike many other Campylobacter species that are commonly found in a variety of hosts, C. ornithocola appears to be predominantly associated with avian species. This specificity provides valuable insights into the evolutionary adaptations and host-pathogen interactions within the genus. Another unique aspect of C. ornithocola is its potential role in the health and disease dynamics of wild bird populations. Understanding its prevalence and pathogenicity in these natural reservoirs can offer clues about the transmission dynamics of Campylobacter species in the environment. This is particularly important for zoonotic diseases, as wild birds can act as vectors for pathogens that may eventually affect human health. From a research perspective, C. ornithocola serves as a model for studying the genetic and phenotypic diversity within the Campylobacter genus. Its genome can be compared with those of other Campylobacter species to identify unique genetic markers and virulence factors. Such comparative genomic studies are crucial for developing targeted interventions and improving diagnostic methods. In summary, Campylobacter ornithocola is a fascinating microorganism due to its host specificity, ecological niche, and potential implications for both avian and human health. Its study not only enhances our understanding of Campylobacter biology but also contributes to broader ecological and epidemiological research.**

Campylobacter ornithocola is a fascinating bacterium primarily associated with avian species, particularly birds. This organism is notable for its unique ecological niche, as it is often found in the intestinal tracts of various birds, including poultry. Its presence in these hosts raises interesting questions about its role in avian health and the potential implications for food safety and zoonotic transmission to humans. One of the most intriguing aspects of Campylobacter ornithocola is its genetic diversity and adaptability, which can provide insights into the evolutionary mechanisms of pathogenicity and host adaptation. Research into this species can enhance our understanding of how certain strains may contribute to disease in birds and potentially affect human health through the food chain. Additionally, Campylobacter ornithocola has been studied for its metabolic capabilities, particularly its ability to utilize various substrates in the gut environment of birds. This metabolic versatility not only aids in its survival but also makes it a valuable model for studying microbial interactions within the avian gut microbiome. Furthermore, the organism's relationship with other Campylobacter species can shed light on the evolutionary pathways of this genus, which includes several important human pathogens. Understanding the genetic and phenotypic traits of Campylobacter ornithocola can help researchers develop better strategies for monitoring and controlling Campylobacter infections in both avian and human populations. In summary, Campylobacter ornithocola stands out due to its specific association with birds, its genetic diversity, and its metabolic adaptability, making it a valuable subject for research in microbiology, ecology, and public health.

Taxonomy

Superkingdom: Bacteria

Phylum: Campylobacterota

Class: Epsilonproteobacteria

Order: Campylobacterales

Family: Campylobacteraceae

Genus: Campylobacter

Species: Campylobacter ornithocola

NCBI ID

1848766

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/201/605/GCA_013201605.1_ASM1320160v1

File for sequence-based predictions:
GCA_013201605.1_ASM1320160v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The bacterium Campylobacter ornithocola is primarily associated with avian species, particularly birds, and has been identified as a potential pathogen in poultry. While its direct impact on human health is not as well-documented as other Campylobacter species, it is important to consider its role in the broader context of foodborne illnesses and zoonotic infections. Infections caused by Campylobacter species are known to lead to gastroenteritis in humans, and C. ornithocola may contribute to the overall burden of Campylobacter-related diseases through contaminated poultry products. Pathogenicity mechanisms of C. ornithocola include its ability to adhere to and invade intestinal epithelial cells, which is a common trait among Campylobacter species. This interaction can provoke an immune response in the host, leading to inflammation and gastrointestinal symptoms. Furthermore, there is a growing concern regarding antimicrobial resistance among Campylobacter species, including C. ornithocola. Resistance to commonly used antibiotics can complicate treatment options for infections, making it crucial to monitor resistance patterns in this organism. While C. ornithocola has not been directly linked to significant outbreaks in humans, its presence in poultry raises concerns about food safety and the potential for transmission to humans through the consumption of undercooked or contaminated poultry products. In summary, while Campylobacter ornithocola may not be a primary pathogen in human infections, its implications in foodborne disease and antimicrobial resistance warrant attention in the context of public health and food safety.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Campylobacter ornithocola is primarily associated with the avian gastrointestinal tract, particularly in birds. This microorganism thrives in the warm, moist environments of the intestines, where it plays a significant role in the digestion of food. Its presence is often linked to the health of its avian hosts, as it can influence nutrient absorption and gut flora balance. In terms of ecological niches, Campylobacter ornithocola is commonly found in the fecal matter of birds, which serves as a reservoir for its propagation. The organism is adapted to survive in the anaerobic conditions of the gut, where it utilizes a unique metabolic pathway to derive energy from organic compounds. Notably, Campylobacter ornithocola can have interactions with other microorganisms in the gut, contributing to a complex microbial community that can affect the overall health of the host. Its role in symbiosis is particularly important, as it may help in the breakdown of complex carbohydrates, thus aiding in nutrient availability for the host. Furthermore, this microorganism can be found in environmental settings where birds congregate, such as wetlands and farmlands, where it can be transmitted through contaminated water or feed. Its adaptability to various environmental conditions allows it to persist in these habitats, making it a significant player in the ecosystem dynamics of avian populations.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Campylobacter ornithocola has shown potential in various industrial applications, particularly in the fields of biotechnology and waste management. This organism is primarily known for its role in the gastrointestinal tracts of birds, but its unique metabolic capabilities can be harnessed for several beneficial processes. In biotechnology, Campylobacter ornithocola can be utilized in fermentation processes, where it may contribute to the production of specific metabolites or enzymes that are valuable in food processing or bioconversion. Its ability to thrive in microaerophilic conditions makes it a candidate for developing novel fermentation techniques that require low oxygen levels. In the realm of waste management, this microorganism has potential applications in biodegradation processes, particularly in the breakdown of organic waste materials. Its metabolic pathways may facilitate the degradation of complex organic compounds, thereby aiding in the treatment of waste and reducing environmental pollution. Furthermore, there is ongoing research into the pharmaceutical development aspects of Campylobacter ornithocola, where its unique biochemical properties could lead to the discovery of new antimicrobial agents or other bioactive compounds. The organism's enzymatic activity may be explored for the production of pharmaceuticals that target specific pathogens or diseases. Overall, while Campylobacter ornithocola is primarily recognized for its ecological role, its potential in biofuel production, enzyme production, and waste treatment highlights its versatility and importance in various industrial sectors.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 9

LLM predicted phenotypes: 4

Phenotype	High-quality annotation	google/gemini-pro	google/gemma-7b-it	mistralai/mixtral-8x7b-instruct:nitro	anthropic/claude-3-haiku:beta	mistralai/mistral-7b-instruct	meta-llama/llama-3-70b-instruct:nitro	openchat/openchat-7b	anthropic/claude-3.5-sonnet	microsoft/phi-3-mini-128k-instruct	google/gemini-flash-1.5	google/gemini-flash-1.5	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	meta-llama/llama-3-8b-instruct:nitro	meta-llama/llama-3-8b-instruct:nitro	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	perplexity/llama-3-sonar-small-32k-chat	perplexity/llama-3-sonar-small-32k-chat	openai/gpt-4	openai/gpt-4	openai/gpt-4o	openai/gpt-4o	google/gemini-pro-1.5	google/gemini-pro-1.5
Motility	TRUE	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓
Gram staining	gram stain negative	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓
Aerophilicity	aerobic	anaerobic ✗	N/A	anaerobic ✗	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	aerotolerant ✗	aerotolerant ✗	aerotolerant ✗	aerotolerant ✗	aerotolerant ✗	aerotolerant ✗	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	N/A	false	true	false	true	true	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false
Biofilm formation	N/A	true	true	true	true	true	true	true	true	false	true	true	true	true	true	true	true	true	true	true	true	true	false	false	true	true	true	true
Animal pathogenicity	TRUE	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓	true ✓	true ✓
Biosafety level	biosafety level 1	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗
Health association	N/A	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Host association	N/A	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	false	false	true	true	true	true
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	gamma	N/A	alpha ✗	N/A	alpha ✗	N/A	N/A	N/A	N/A	N/A	gamma ✓	gamma ✓	beta ✗	beta ✗	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	spirillum	spirillum ✓	bacillus ✗	spirillum ✓	spirillum ✓	coccus ✗	spirillum ✓	spirillum ✓	spirillum ✓	spirillum ✓	spirillum ✓	spirillum ✓	spirillum ✓	spirillum ✓	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	spirillum ✓	spirillum ✓	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	spirillum ✓	spirillum ✓	spirillum ✓	spirillum ✓

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