Promicromonospora soli

General Information

Promicromonospora soli is a fascinating microorganism that belongs to the genus Promicromonospora. This bacterium was first isolated from soil, which is reflected in its species name, soli. One of the most intriguing aspects of P. soli is its potential for producing bioactive compounds. Members of the genus Promicromonospora are known for their ability to synthesize a variety of secondary metabolites, which can have antimicrobial, antifungal, or even anticancer properties. This makes P. soli particularly valuable for biotechnological and pharmaceutical research. Another unique feature of Promicromonospora soli is its adaptability to different environmental conditions. This adaptability suggests that it could play a significant role in soil health and nutrient cycling, making it an interesting subject for studies in environmental microbiology and ecology. Furthermore, the genetic makeup of P. soli offers a treasure trove of information for researchers. Genomic studies can reveal the pathways involved in the synthesis of its bioactive compounds, providing insights that could lead to the development of new drugs or agricultural products. In summary, Promicromonospora soli is not just another soil bacterium; it is a potential powerhouse for biotechnological applications, with its ability to produce valuable secondary metabolites and its adaptability to various environmental conditions.**

Promicromonospora soli is a fascinating actinobacterium that was first isolated from soil samples in a unique ecological niche. This organism is particularly interesting due to its ability to produce a variety of bioactive compounds, which have significant implications for pharmaceutical research. The secondary metabolites produced by P. soli include antibiotics and other antimicrobial agents, making it a valuable candidate for drug discovery. One of the unique aspects of P. soli is its adaptability to different environmental conditions, which allows it to thrive in diverse soil ecosystems. This adaptability not only contributes to its survival but also enhances its potential for biotechnological applications, particularly in bioremediation and soil health improvement. The metabolic versatility of P. soli enables it to degrade complex organic compounds, which can be harnessed for environmental cleanup efforts. Furthermore, P. soli has garnered attention in the field of microbial ecology due to its role in nutrient cycling and its interactions with other soil microorganisms. Understanding these interactions can provide insights into soil microbiomes and their contributions to ecosystem functioning. Overall, Promicromonospora soli stands out as a promising organism for further research, with potential applications in medicine, environmental science, and agriculture.

Taxonomy

Superkingdom: Bacteria

Phylum: Actinomycetota

Class: Actinomycetes

Order: Micrococcales

Family: Promicromonosporaceae

Genus: Promicromonospora

Species: Promicromonospora soli

NCBI ID

2035533

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/653/785/GCA_014653785.1_ASM1465378v1

File for sequence-based predictions:
GCA_014653785.1_ASM1465378v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The microorganism Promicromonospora soli is a member of the Actinobacteria phylum and has been primarily isolated from soil environments. While its direct clinical implications in human health are not extensively documented, it is important to note that members of the Actinobacteria group can have significant roles in human health and disease associations. Some species within this genus may produce bioactive compounds that could have potential therapeutic applications, although specific studies on P. soli are limited. Pathogenicity: Currently, there is no strong evidence linking Promicromonospora soli to human infections or diseases. However, the potential for soil-dwelling microorganisms to act as opportunistic pathogens in immunocompromised individuals cannot be entirely ruled out. Antimicrobial Resistance: As with many soil bacteria, there is a possibility that P. soli may harbor genes associated with antimicrobial resistance, which could be of concern in the context of environmental reservoirs of resistance genes. This aspect warrants further investigation, especially considering the increasing prevalence of resistant infections in clinical settings. Medical Applications: The exploration of Promicromonospora soli for its potential in producing novel antibiotics or other bioactive compounds is an area of interest. Actinobacteria are well-known for their ability to synthesize a variety of secondary metabolites, which could lead to the development of new therapeutics or probiotics. In summary, while Promicromonospora soli does not currently have well-documented clinical relevance, its classification within a group known for significant bioactive compound production and potential roles in antimicrobial resistance highlights the need for ongoing research into its properties and implications for human health.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Promicromonospora soli is a species of actinobacteria that is primarily associated with soil ecosystems. This microorganism thrives in a variety of terrestrial habitats, particularly in nutrient-rich environments where organic matter is abundant. Its presence is often linked to the decomposition of organic materials, playing a crucial role in nutrient cycling within the soil biome. Soil Microhabitats: Promicromonospora soli is commonly found in the rhizosphere, the region of soil that is directly influenced by root secretions and associated soil microorganisms. Here, it interacts with plant roots, contributing to plant health through the breakdown of organic compounds and the release of nutrients that are beneficial for plant growth. Ecological Roles: This microorganism is known for its ability to degrade complex organic substances, which makes it an important player in the decomposition process. By breaking down organic matter, Promicromonospora soli helps to recycle nutrients back into the soil, thus supporting the overall health of the ecosystem. Additionally, it may engage in symbiotic relationships with plants, enhancing nutrient uptake and promoting plant resilience against pathogens. Environmental Adaptations: Promicromonospora soli exhibits remarkable adaptability to varying soil conditions, including changes in moisture and nutrient availability. This adaptability allows it to thrive in diverse soil types, from sandy to clay-rich soils, and contributes to its role in maintaining soil structure and fertility. In summary, Promicromonospora soli is a vital component of soil biomes, contributing to nutrient cycling, plant health, and overall ecosystem stability through its various ecological interactions.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Promicromonospora soli has shown significant potential in various industrial applications. One of the most notable areas is in biotechnology, where Promicromonospora soli is utilized for its ability to produce a range of enzymes that can be harnessed in biocatalysis processes. These enzymes are particularly valuable in the food industry for fermentation processes, enhancing flavor and texture in products such as cheese and fermented beverages. In the realm of waste management, Promicromonospora soli has demonstrated capabilities in biodegradation, particularly in the breakdown of complex organic compounds found in agricultural and industrial waste. This makes it a candidate for use in bioremediation efforts, where it can help in the detoxification of contaminated environments, thus contributing to environmental sustainability. Furthermore, the potential of Promicromonospora soli in biofuel production is noteworthy. Its metabolic pathways can be exploited to convert biomass into biofuels through fermentation processes, providing a renewable energy source that can reduce reliance on fossil fuels. In pharmaceutical development, Promicromonospora soli has been studied for its ability to produce bioactive compounds, which may lead to the discovery of new antibiotics or other therapeutic agents. The organism's unique metabolic capabilities allow for the synthesis of novel compounds that could be beneficial in treating various diseases. Overall, Promicromonospora soli represents a versatile microorganism with diverse applications across multiple industries, particularly in enzyme production, biodegradation, and biocatalysis, making it a valuable asset in the pursuit of sustainable industrial practices.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 8

LLM predicted phenotypes: 5

Phenotype	High-quality annotation	google/gemini-pro	meta-llama/llama-3-70b-instruct:nitro	google/gemini-flash-1.5	google/palm-2-chat-bison-32k	google/gemini-pro-1.5	mistralai/mistral-7b-instruct	mistralai/mixtral-8x7b-instruct:nitro	anthropic/claude-3-haiku:beta	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	meta-llama/llama-3-8b-instruct:nitro	meta-llama/llama-3-8b-instruct:nitro	openai/gpt-4	openai/gpt-4	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	openai/gpt-4o	openai/gpt-4o	anthropic/claude-3.5-sonnet	anthropic/claude-3.5-sonnet	google/gemma-7b-it	google/gemma-7b-it	perplexity/llama-3-sonar-small-32k-chat	perplexity/llama-3-sonar-small-32k-chat	openchat/openchat-7b	openchat/openchat-7b	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct
Motility	FALSE	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Gram staining	gram stain positive	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain negative ✗
Aerophilicity	aerobic	aerobic ✓	aerobic ✓	N/A	aerobic ✓	aerobic ✓	N/A	N/A	N/A	aerobic ✓	aerobic ✓	aerotolerant ✗	aerotolerant ✗	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	false ✓	false ✓	true ✗	false ✓	true ✗	true ✗	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Biofilm formation	N/A	true	true	true	true	false	false	true	true	true	true	true	true	false	false	true	true	false	false	true	true	true	true	true	true	false	false	true	true
Animal pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Biosafety level	biosafety level 1	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓
Health association	N/A	true	true	false	true	false	false	true	true	false	false	false	false	false	false	true	true	false	false	false	false	true	true	true	true	false	false	false	false
Host association	N/A	false	true	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	true	true	false	false	true	true
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓
Spore formation	FALSE	true ✗	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓
Hemolysis	N/A	N/A	N/A	gamma	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	N/A	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	coccus	coccus

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