Microbacterium hibisci

General Information

Microbacterium hibisci is a fascinating bacterium that belongs to the genus Microbacterium. This microorganism is particularly interesting due to its association with plants, specifically the hibiscus plant, from which it was first isolated. One of the key characteristics of M. hibisci is its ability to thrive in the rhizosphere, the region of soil that is directly influenced by root secretions and associated soil microorganisms. This makes it a subject of interest in agricultural and environmental microbiology. Microbacterium hibisci has been studied for its potential role in promoting plant growth and health. It is known to produce various enzymes and metabolites that can enhance nutrient availability and uptake for plants. This plant-growth-promoting trait is valuable for sustainable agriculture practices, as it can reduce the need for chemical fertilizers and improve crop yields. Another noteworthy aspect of M. hibisci is its potential use in bioremediation. The bacterium has shown the ability to degrade certain environmental pollutants, making it a candidate for cleaning up contaminated soils and water bodies. This capability is particularly important in the context of increasing environmental pollution and the need for eco-friendly remediation strategies. In addition to its environmental applications, Microbacterium hibisci is also of interest in the field of biotechnology. The enzymes it produces can be harnessed for various industrial processes, including the breakdown of complex organic materials. This opens up possibilities for its use in waste management and the production of biofuels. Overall, Microbacterium hibisci is a versatile and valuable microorganism with a range of applications in agriculture, environmental science, and biotechnology. Its unique association with plants and its ability to produce beneficial enzymes and metabolites make it a subject of ongoing research and interest.

Microbacterium hibisci is a fascinating species of bacteria that was first isolated from the leaves of the hibiscus plant. This organism is particularly interesting due to its unique ecological niche, thriving in the plant's environment, which suggests a potential role in plant health and disease resistance. The ability of M. hibisci to inhabit such a specific habitat raises questions about its interactions with the plant's microbiome and its contributions to the overall health of hibiscus species. One of the most notable characteristics of Microbacterium hibisci is its metabolic versatility. This bacterium is capable of degrading a variety of organic compounds, which makes it a valuable candidate for bioremediation studies. Its potential to break down pollutants could be harnessed in environmental applications, particularly in areas contaminated with organic waste. Additionally, M. hibisci has been studied for its antimicrobial properties. Research has indicated that it produces compounds that can inhibit the growth of certain pathogens, making it a subject of interest for developing new antimicrobial agents. This aspect of its biology could have significant implications for agriculture and medicine, particularly in the search for natural alternatives to synthetic antibiotics. Furthermore, the genetic and biochemical pathways of Microbacterium hibisci are still being explored, which presents opportunities for biotechnological applications. Understanding its genetic makeup could lead to advancements in genetic engineering, particularly in enhancing its beneficial traits for use in agriculture or environmental management. In summary, Microbacterium hibisci stands out due to its ecological significance, metabolic capabilities, and potential for biotechnological innovations, making it a valuable organism for further research in microbiology and environmental science.

Taxonomy

Superkingdom: Bacteria

Phylum: Actinomycetota

Class: Actinomycetes

Order: Micrococcales

Family: Microbacteriaceae

Genus: Microbacterium

Species: Microbacterium hibisci

NCBI ID

2036000

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCA/015/278/255/GCA_015278255.1_ASM1527825v1

File for sequence-based predictions:
GCA_015278255.1_ASM1527825v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The microorganism Microbacterium hibisci is a member of the genus Microbacterium, which is known for its environmental presence and potential clinical significance. While M. hibisci is not commonly associated with human disease, it has been isolated from various clinical specimens, indicating its potential role as an opportunistic pathogen. Clinical implications of M. hibisci include its association with infections in immunocompromised patients, where it may contribute to soft tissue infections or respiratory tract infections. Its pathogenicity is not well characterized, but its ability to survive in diverse environments suggests it may possess certain virulence factors that allow it to evade the immune response in susceptible individuals. Furthermore, there is limited information regarding its antimicrobial resistance patterns, but like many environmental bacteria, it may harbor resistance genes that could complicate treatment options. The organism's role in human health is still under investigation, and while it is not widely recognized as a significant pathogen, its presence in clinical settings warrants further study to understand its implications in nosocomial infections and its potential as a contaminant in clinical laboratories. Overall, Microbacterium hibisci serves as a reminder of the complexities of microbial interactions in human health and the importance of monitoring environmental bacteria that may pose risks in clinical contexts.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Microbacterium hibisci is a species of bacteria that is primarily associated with soil environments and plant-associated habitats. This microorganism is often found in the rhizosphere, where it plays a crucial role in nutrient cycling and plant health. Its presence in the soil contributes to the breakdown of organic matter, enhancing soil fertility and promoting plant growth. In addition to its role in soil ecosystems, Microbacterium hibisci has been documented in marine environments, particularly in association with various types of algae. Here, it may engage in symbiotic relationships that benefit both the algae and the bacteria, potentially aiding in nutrient acquisition and providing protection against pathogens. Furthermore, this bacterium exhibits remarkable environmental adaptability, thriving in conditions that may be inhospitable to other microorganisms. Its ability to withstand varying levels of salinity and temperature makes it a resilient inhabitant of diverse ecological niches. Overall, Microbacterium hibisci is an important player in its ecosystems, contributing to biogeochemical cycles and enhancing the health of its associated habitats.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Microbacterium hibisci has shown potential in various industrial applications, particularly in the fields of biotechnology, waste management, and pharmaceutical development. This organism is known for its ability to perform biodegradation, which makes it valuable in the treatment of waste materials, especially in environments contaminated with organic pollutants. Its enzymatic activity allows it to break down complex compounds, facilitating the bioremediation of polluted sites. In the realm of biofuel production, Microbacterium hibisci can be involved in the fermentation processes that convert biomass into bioethanol. This is achieved through its metabolic pathways that enable the utilization of various substrates, including agricultural waste, thus contributing to sustainable energy solutions. Moreover, Microbacterium hibisci has been studied for its potential in pharmaceutical development, particularly in the production of bioactive compounds. Its unique metabolic capabilities may lead to the discovery of novel antibiotics or other therapeutic agents, making it a candidate for further research in drug development. Overall, the versatility of Microbacterium hibisci in these applications highlights its significance in advancing industrial processes that are environmentally friendly and economically viable.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 9

LLM predicted phenotypes: 4

Phenotype	High-quality annotation	meta-llama/llama-3-70b-instruct:nitro	google/palm-2-chat-bison-32k	google/gemini-pro-1.5	anthropic/claude-3.5-sonnet	mistralai/mixtral-8x7b-instruct:nitro	meta-llama/llama-3-8b-instruct:nitro	microsoft/phi-3-mini-128k-instruct	anthropic/claude-3-haiku:beta	google/gemini-flash-1.5	google/gemini-flash-1.5	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	openai/gpt-4	openai/gpt-4	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	openai/gpt-4o	openai/gpt-4o	google/gemini-pro	google/gemini-pro	google/gemma-7b-it	google/gemma-7b-it	mistralai/mistral-7b-instruct	mistralai/mistral-7b-instruct	perplexity/llama-3-sonar-small-32k-chat	perplexity/llama-3-sonar-small-32k-chat	openchat/openchat-7b	openchat/openchat-7b
Motility	FALSE	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓
Gram staining	gram stain positive	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain negative ✗	gram stain negative ✗	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain negative ✗	N/A	gram stain variable ✗	N/A	gram stain negative ✗	N/A	gram stain positive ✓
Aerophilicity	aerobic	aerotolerant ✗	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A	facultatively anaerobic ✗	facultatively anaerobic ✗	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Biofilm formation	N/A	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	false	false	true	true	false	false
Animal pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Biosafety level	biosafety level 1	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓
Health association	N/A	true	true	true	true	true	true	false	true	true	true	false	false	true	true	true	true	true	true	true	true	false	false	true	true	true	true	false	false
Host association	FALSE	true ✗	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓
Plant pathogenicity	FALSE	true ✗	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	gamma	gamma	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	N/A	bacillus	bacillus	bacillus	bacillus	bacillus	coccus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	coccus	coccus	coccus	coccus

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