Vibrio tasmaniensis

General Information

Vibrio tasmaniensis is a fascinating marine bacterium that belongs to the genus Vibrio. This organism is particularly interesting due to its bioluminescent properties, which make it a subject of significant research in marine biology and biotechnology. The bioluminescence of V. tasmaniensis is not only a captivating natural phenomenon but also has potential applications in environmental monitoring and medical diagnostics. Another notable feature of V. tasmaniensis is its ability to thrive in diverse marine environments, including both coastal and open ocean waters. This adaptability makes it a valuable model organism for studying marine microbial ecology and the impact of environmental changes on marine ecosystems. From a genomic perspective, V. tasmaniensis has been studied for its genetic diversity and evolutionary adaptations. Its genome reveals insights into the mechanisms of horizontal gene transfer, which is a critical process for the evolution of new traits and antibiotic resistance in bacteria. In addition, V. tasmaniensis has been explored for its potential in bioremediation. Its ability to degrade various organic compounds suggests that it could play a role in cleaning up marine pollutants, making it an organism of interest for environmental science and sustainability efforts. Overall, Vibrio tasmaniensis stands out due to its bioluminescence, ecological versatility, genetic insights, and potential applications in bioremediation, making it a valuable subject for ongoing scientific research.

Vibrio tasmaniensis is a fascinating marine bacterium that was first isolated from Tasmanian waters. This organism is particularly interesting due to its unique ecological niche and its role in the marine ecosystem. It thrives in brackish and coastal environments, showcasing its adaptability to varying salinity levels. This adaptability makes it a valuable subject for studies on osmotic stress and the mechanisms of survival in fluctuating environments. One of the most notable characteristics of Vibrio tasmaniensis is its potential for biotechnological applications. It has been investigated for its ability to produce bioactive compounds, which may have implications in pharmaceuticals and natural product chemistry. The exploration of these compounds could lead to the discovery of new antibiotics or other therapeutic agents, making this organism a promising candidate for further research. Additionally, Vibrio tasmaniensis is part of a larger group of Vibrio species known for their bioluminescent properties. While not all strains exhibit this trait, the study of luminescence in related species can provide insights into cell signaling and quorum sensing, which are critical for understanding microbial communication and behavior in natural environments. Overall, Vibrio tasmaniensis stands out not only for its ecological significance but also for its potential contributions to marine biotechnology and environmental microbiology. Its study can enhance our understanding of microbial diversity in marine ecosystems and the potential applications of marine microorganisms in various fields.

Taxonomy

Superkingdom: Bacteria

Phylum: Pseudomonadota

Class: Gammaproteobacteria

Order: Vibrionales

Family: Vibrionaceae

Genus: Vibrio

Species: Vibrio tasmaniensis

NCBI ID

212663

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCF/024/347/635/GCF_024347635.1_ASM2434763v1

File for sequence-based predictions:
GCF_024347635.1_ASM2434763v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The bacterium Vibrio tasmaniensis is a marine organism that has been associated with various clinical implications, particularly in relation to infections in humans. It is primarily found in coastal waters and can be linked to the consumption of contaminated seafood, leading to gastroenteritis and other gastrointestinal diseases. The organism is part of the larger Vibrio genus, which includes well-known pathogens such as Vibrio cholerae and Vibrio parahaemolyticus. Pathogenicity of Vibrio tasmaniensis is attributed to its ability to produce toxins and adhere to intestinal epithelial cells, which can disrupt normal gut function. While it is not as widely recognized as other Vibrio species, its potential to cause infections in immunocompromised individuals or those with underlying health conditions is a concern. In terms of antimicrobial resistance, there is limited data available, but like many Vibrio species, Vibrio tasmaniensis may exhibit resistance to certain antibiotics, complicating treatment options for infected patients. Monitoring for resistance patterns is essential, especially in regions where seafood consumption is prevalent. Furthermore, the organism's interaction with the human immune system is an area of interest, as it may employ various immune evasion strategies to survive in the host. This includes the production of biofilms and modulation of host immune responses, which can lead to persistent infections. Overall, while Vibrio tasmaniensis is not as prominent in clinical settings as other Vibrio species, its potential role in foodborne infections and the implications of its pathogenicity warrant further research and awareness, particularly in coastal communities and among seafood consumers.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Vibrio tasmaniensis is a marine bacterium commonly found in coastal waters and estuaries, particularly in regions with high nutrient availability. This organism thrives in environments characterized by brackish water and is often associated with sediment layers where organic matter is abundant. Its presence is notably linked to areas with fluctuating salinity levels, which can occur due to tidal influences and freshwater influx from rivers. In these marine ecosystems, Vibrio tasmaniensis plays a crucial role in the decomposition of organic materials, contributing to nutrient cycling and the overall health of the ecosystem. It is known to engage in symbiotic relationships with various marine organisms, including fish and invertebrates, where it can aid in digestion or provide protection against pathogens. Additionally, this bacterium exhibits remarkable environmental adaptability, allowing it to survive in varying temperatures and salinity conditions. Its ability to form biofilms on surfaces such as rocks and aquatic plants enhances its survival and interaction with other microorganisms, further solidifying its role in the microbial community of coastal habitats. Overall, Vibrio tasmaniensis is an integral component of the marine biome, influencing both ecological dynamics and the health of marine life.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Vibrio tasmaniensis has shown significant potential in various industrial applications. One of the most notable areas is in biotechnology, where it is utilized for its ability to produce enzymes that can be harnessed in various biochemical processes. For instance, the enzymatic activity of Vibrio tasmaniensis can be applied in biodegradation, breaking down complex organic materials, which is particularly useful in waste management scenarios. This capability allows for the effective treatment of wastewater, where the organism can help in the degradation of pollutants, thus contributing to cleaner water systems. In addition, Vibrio tasmaniensis has been explored for its role in biofuel production. The organism can participate in fermentation processes that convert organic substrates into biofuels, such as ethanol or biodiesel. This application is crucial in the pursuit of sustainable energy sources, as it provides an alternative to fossil fuels. Furthermore, the pharmaceutical industry has also taken interest in Vibrio tasmaniensis due to its potential in the development of new drugs. The unique metabolites produced by this microorganism may lead to the discovery of novel compounds with therapeutic properties, showcasing its importance in pharmaceutical development. Overall, Vibrio tasmaniensis exemplifies a versatile microorganism with applications spanning biotechnology, waste management, biofuel production, and pharmaceutical development, making it a valuable asset in various industrial sectors.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 9

LLM predicted phenotypes: 4

Phenotype	High-quality annotation	openai/gpt-4o	openai/gpt-4o	google/gemini-pro-1.5	anthropic/claude-3.5-sonnet	google/gemini-flash-1.5	anthropic/claude-3-haiku:beta	meta-llama/llama-3-70b-instruct:nitro	mistralai/mixtral-8x7b-instruct:nitro	meta-llama/llama-3-8b-instruct:nitro	openchat/openchat-7b	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	openai/gpt-4	openai/gpt-4	google/gemma-7b-it	google/gemma-7b-it	google/gemini-pro	google/gemini-pro	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	perplexity/llama-3-sonar-small-32k-chat	perplexity/llama-3-sonar-small-32k-chat	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	mistralai/mistral-7b-instruct	mistralai/mistral-7b-instruct
Motility	TRUE	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓
Gram staining	gram stain negative	N/A	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓
Aerophilicity	N/A	facultatively anaerobic	facultatively anaerobic	facultatively anaerobic	N/A	N/A	N/A	N/A	facultatively anaerobic	N/A	N/A	facultatively anaerobic	facultatively anaerobic	facultatively anaerobic	facultatively anaerobic	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	true ✗	true ✗	false ✓	true ✗	false ✓	true ✗	true ✗	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗
Biofilm formation	N/A	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Animal pathogenicity	TRUE	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓	true ✓	true ✓
Biosafety level	biosafety level 1	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗
Health association	N/A	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Host association	TRUE	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	N/A	beta	beta	N/A	beta	beta	beta	beta	N/A	N/A	N/A	N/A	N/A	N/A	N/A	alpha	alpha	gamma	gamma	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	bacillus	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	spirillum ✗	spirillum ✗	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓

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