Streptomyces asoensis

General Information

Streptomyces asoensis is a fascinating microorganism belonging to the genus Streptomyces, which is renowned for its prolific production of secondary metabolites. One of the most notable characteristics of S. asoensis is its ability to produce a wide array of bioactive compounds, including antibiotics, antifungals, and antitumor agents. This makes it an invaluable resource in the field of pharmaceutical research and biotechnology. The genus Streptomyces is well-known for its complex life cycle and filamentous growth, which resembles that of fungi more than typical bacteria. S. asoensis forms a dense, branched mycelium and produces spores that are instrumental in its reproduction and dissemination. Another intriguing aspect of S. asoensis is its ecological role in soil environments. It contributes to the decomposition of organic matter, thereby playing a crucial part in nutrient cycling and soil health. This organism's ability to degrade complex polymers such as cellulose and chitin further underscores its ecological importance. From a genetic perspective, S. asoensis possesses a large genome with a high G+C content, characteristic of the Streptomyces genus. This genetic richness provides a vast reservoir of genes that can be harnessed for biotechnological applications, including the discovery of new drugs and enzymes. In summary, Streptomyces asoensis is a microorganism of significant interest due to its prolific production of bioactive compounds, its complex life cycle, and its important ecological role. Its potential in pharmaceutical and biotechnological applications continues to make it a subject of extensive research and exploration.

Streptomyces asoensis is a fascinating actinobacterium known for its remarkable ability to produce a variety of bioactive compounds, making it a valuable organism in pharmaceutical research. This species is particularly interesting due to its potential in the discovery of novel antibiotics and other therapeutic agents. The secondary metabolites produced by S. asoensis have shown significant antimicrobial activity, which is crucial in the ongoing battle against antibiotic-resistant pathogens. One of the unique aspects of S. asoensis is its ecological role in soil environments, where it contributes to the decomposition of organic matter and nutrient cycling. This not only highlights its importance in maintaining soil health but also underscores its potential in bioremediation efforts. The ability of S. asoensis to thrive in diverse environments adds to its research value, as scientists explore its adaptability and metabolic pathways. Furthermore, the genomic analysis of S. asoensis has revealed a rich repertoire of biosynthetic gene clusters, suggesting that this organism may be a treasure trove for discovering new natural products. The ongoing research into its genetic makeup could lead to breakthroughs in synthetic biology and the development of engineered strains for enhanced production of desired compounds. Overall, Streptomyces asoensis stands out as a promising candidate for further exploration in the fields of microbiology, pharmacology, and environmental science.

Taxonomy

Superkingdom: Bacteria

Phylum: Actinomycetota

Class: Actinomycetes

Order: Kitasatosporales

Family: Streptomycetaceae

Genus: Streptomyces

Species: Streptomyces asoensis

NCBI ID

249586

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCA/013/085/465/GCA_013085465.1_ASM1308546v1

File for sequence-based predictions:
GCA_013085465.1_ASM1308546v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The organism Streptomyces asoensis is a member of the genus Streptomyces, which is known for its significant role in the production of antibiotics and other bioactive compounds. This microorganism has been studied for its potential in antimicrobial therapy, particularly due to its ability to produce various secondary metabolites that exhibit antibacterial and antifungal properties. The clinical implications of Streptomyces asoensis are particularly relevant in the context of antimicrobial resistance, as it may offer alternative treatment options against resistant strains of bacteria. In addition to its therapeutic potential, Streptomyces asoensis has been investigated for its role in human health through its contributions to the microbiome. Certain species within the Streptomyces genus are known to have probiotic effects, which can enhance gut health and modulate the immune response. However, the specific interactions of Streptomyces asoensis with the human body and its potential as a probiotic are still under research. Furthermore, the organism's ability to produce enzymes and metabolites may have applications in biotechnology and pharmaceutical development, making it a subject of interest for future studies aimed at harnessing its beneficial properties. Overall, while Streptomyces asoensis is not widely recognized for causing infections in humans, its contributions to medicine and potential in combating pathogenic organisms highlight its clinical relevance.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Streptomyces asoensis is a species of actinobacteria that is primarily found in soil ecosystems and decaying organic matter. This microorganism thrives in environments rich in organic material, where it plays a crucial role in the decomposition process. Its ability to break down complex organic compounds contributes significantly to nutrient cycling within these biomes. Soil Microhabitats: Streptomyces asoensis is commonly associated with aerobic soil environments, where it can be found in the rhizosphere of plants. Here, it engages in nutrient exchange and can promote plant growth through the production of various bioactive compounds. This interaction exemplifies a form of symbiosis, where the bacteria benefit from the organic materials provided by the plants, while the plants gain enhanced nutrient availability and protection against pathogens. Decaying Organic Matter: In addition to its presence in soil, Streptomyces asoensis is also prevalent in decaying leaf litter and compost piles. In these habitats, it contributes to the breakdown of organic materials, facilitating the recycling of nutrients back into the ecosystem. This process is vital for maintaining soil health and fertility, highlighting the organism's role as a decomposer. Overall, Streptomyces asoensis is an essential component of terrestrial ecosystems, particularly in nutrient-rich environments where it aids in decomposition and supports plant health through its various ecological interactions.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Streptomyces asoensis has shown significant potential in various industrial applications. One of the most notable areas is in biotechnology, where Streptomyces asoensis is utilized for its ability to produce a wide range of bioactive compounds, including antibiotics and enzymes. This organism is particularly valuable in the fermentation process, where it can be harnessed to synthesize secondary metabolites that have pharmaceutical significance. In the realm of waste management, Streptomyces asoensis has demonstrated capabilities in biodegradation, particularly in the breakdown of complex organic materials. This makes it a candidate for use in bioremediation efforts, where it can help in the detoxification of contaminated environments, such as soil and water, by degrading pollutants. Furthermore, the enzymatic activity of Streptomyces asoensis is noteworthy, as it can produce various enzymes that are useful in biofuel production. These enzymes can facilitate the conversion of biomass into fermentable sugars, which are essential for the production of bioethanol and other biofuels. The efficiency of these processes can be enhanced through the application of the organism in enzyme production. Overall, Streptomyces asoensis represents a versatile microorganism with promising applications in pharmaceutical development, biotechnology, waste management, and biofuel production, making it a valuable asset in multiple industrial sectors.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 10

LLM predicted phenotypes: 3

Phenotype	High-quality annotation	google/gemini-flash-1.5	anthropic/claude-3-haiku:beta	perplexity/llama-3-sonar-small-32k-chat	google/gemma-7b-it	openchat/openchat-7b	mistralai/mixtral-8x7b-instruct:nitro	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	openai/gpt-4o	openai/gpt-4o	google/gemini-pro-1.5	google/gemini-pro-1.5	anthropic/claude-3.5-sonnet	anthropic/claude-3.5-sonnet	meta-llama/llama-3-8b-instruct:nitro	meta-llama/llama-3-8b-instruct:nitro	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	meta-llama/llama-3-70b-instruct:nitro	meta-llama/llama-3-70b-instruct:nitro	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	google/gemini-pro	google/gemini-pro	openai/gpt-4	openai/gpt-4	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct	mistralai/mistral-7b-instruct	mistralai/mistral-7b-instruct
Motility	FALSE	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗
Gram staining	gram stain positive	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain variable ✗
Aerophilicity	aerobic	aerobic ✓	N/A	N/A	N/A	N/A	N/A	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerotolerant ✗	aerotolerant ✗	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗
Biofilm formation	N/A	true	true	true	true	false	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Animal pathogenicity	FALSE	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Biosafety level	biosafety level 1	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 3 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓
Health association	N/A	false	true	true	true	true	true	false	false	true	true	true	true	false	false	false	false	true	true	true	true	true	true	false	false	true	true	false	false	false	false
Host association	FALSE	true ✗	false ✓	true ✗	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	TRUE	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓
Hemolysis	N/A	gamma	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	tail	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗

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