Vibrio aquaticus

General Information

Vibrio aquaticus is a fascinating microorganism that has garnered attention due to its unique ecological niche and potential applications in biotechnology. This bacterium is typically found in aquatic environments, particularly in marine and estuarine waters, where it plays a crucial role in nutrient cycling and organic matter decomposition. One of the most intriguing aspects of Vibrio aquaticus is its ability to thrive in a wide range of salinities, making it an excellent model organism for studying osmoregulation and salt tolerance mechanisms. This adaptability is not only of academic interest but also holds potential for biotechnological applications, such as the development of salt-tolerant crops or bioremediation strategies for saline environments. Another notable feature of Vibrio aquaticus is its production of bioactive compounds. These compounds have shown promise in preliminary studies for their antimicrobial and antifouling properties, which could be harnessed for medical and industrial applications. The bacterium's ability to produce these compounds under various environmental conditions makes it a valuable subject for research into natural product biosynthesis and regulation. Furthermore, Vibrio aquaticus has been studied for its interactions with other marine organisms, including its role in symbiotic relationships with marine invertebrates. These interactions can provide insights into the complex dynamics of marine ecosystems and the evolutionary adaptations that enable such symbioses. In summary, Vibrio aquaticus is a microorganism of significant interest due to its ecological versatility, production of bioactive compounds, and potential biotechnological applications. Its study not only enhances our understanding of marine microbiology but also opens up new avenues for practical applications in various fields.

Vibrio aquaticus is a fascinating marine bacterium that thrives in coastal and estuarine environments. This organism is particularly interesting due to its halophilic nature, meaning it requires a high salt concentration for optimal growth, which makes it an excellent model for studying salt tolerance mechanisms in bacteria. Its ability to adapt to varying salinity levels provides insights into the evolutionary processes that allow microorganisms to inhabit diverse ecological niches. One of the unique features of Vibrio aquaticus is its bioluminescent properties. This bacterium produces light through a biochemical reaction involving luciferin and luciferase, which not only serves as a captivating phenomenon but also has potential applications in biotechnology, such as in the development of biosensors and bioluminescent markers for environmental monitoring. Additionally, Vibrio aquaticus has been studied for its role in nutrient cycling within marine ecosystems. It contributes to the degradation of organic matter and plays a part in the overall health of marine environments. Understanding its metabolic pathways can provide valuable information on how marine bacteria interact with their surroundings and contribute to ecosystem dynamics. Furthermore, this species is of interest in the field of marine microbiology due to its potential applications in aquaculture. Its presence in marine environments can influence the health of fish populations, making it a subject of research for improving aquaculture practices and ensuring sustainable fish farming. In summary, Vibrio aquaticus stands out not only for its ecological significance but also for its potential applications in biotechnology and aquaculture, making it a valuable organism for ongoing research.

Taxonomy

Superkingdom: Bacteria

Phylum: Pseudomonadota

Class: Gammaproteobacteria

Order: Vibrionales

Family: Vibrionaceae

Genus: Vibrio

Species: Vibrio aquaticus

NCBI ID

2496559

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/970/385/GCF_003970385.1_ASM397038v1

File for sequence-based predictions:
GCF_003970385.1_ASM397038v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The organism Vibrio aquaticus is a halophilic bacterium commonly found in marine environments, particularly in coastal waters. It is known for its potential clinical implications, particularly in relation to infections associated with seafood consumption. Vibrio species, including Vibrio aquaticus, are often linked to gastroenteritis and can cause severe illness in individuals with compromised immune systems or underlying health conditions. The bacterium can lead to symptoms such as diarrhea, abdominal cramps, and vomiting, which are characteristic of vibrio-related infections. In terms of pathogenicity, Vibrio aquaticus possesses virulence factors that enable it to adhere to and invade host tissues, contributing to its ability to cause disease. The organism's survival in saline environments and its ability to form biofilms may enhance its pathogenic potential. Furthermore, it has been noted that certain strains exhibit antimicrobial resistance, complicating treatment options for infected individuals. This resistance can be attributed to the acquisition of resistance genes and the ability to form biofilms, which protect the bacteria from antibiotic action. While Vibrio aquaticus is not as widely studied as other members of the Vibrio genus, its presence in marine ecosystems and association with seafood-related illnesses underscore its relevance in public health. There is ongoing research into the development of probiotics and therapeutics that could potentially utilize non-pathogenic strains of Vibrio for health benefits, although this area remains largely exploratory. Overall, the clinical implications of Vibrio aquaticus highlight the importance of monitoring seafood safety and understanding the dynamics of marine bacteria in relation to human health.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Vibrio aquaticus is a marine bacterium commonly found in coastal waters and estuaries, thriving in environments characterized by high salinity and nutrient availability. This microorganism plays a crucial role in the marine ecosystem, particularly in the cycling of organic matter and nutrients. It is often associated with phytoplankton blooms, where it contributes to the breakdown of organic materials, thus facilitating nutrient recycling and supporting the food web. In terms of its ecological niche, Vibrio aquaticus is adapted to fluctuating environmental conditions, such as changes in temperature and salinity, which are typical in coastal habitats. Its ability to thrive in these dynamic environments underscores its importance in maintaining the health of marine ecosystems. Additionally, Vibrio aquaticus can engage in symbiotic relationships with various marine organisms, including fish and invertebrates. These interactions can enhance the host's nutrient uptake and provide protection against pathogens, showcasing the bacterium's role in promoting biodiversity and ecosystem stability. Overall, Vibrio aquaticus exemplifies the intricate connections within marine biomes, highlighting its significance in nutrient cycling, symbiosis, and adaptation to environmental changes.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Vibrio aquaticus has shown significant potential in various industrial applications. One of the primary areas of interest is in biotechnology, where Vibrio aquaticus is utilized for its ability to produce enzymes that can be harnessed in biocatalysis processes. These enzymes are particularly valuable in the food industry for applications such as fermentation, where they can enhance the flavor and preservation of food products. In the realm of waste management, Vibrio aquaticus has demonstrated capabilities in biodegradation processes, effectively breaking down organic pollutants in aquatic environments. This property makes it a candidate for use in bioremediation efforts, where it can help restore contaminated water bodies by degrading harmful substances. Furthermore, Vibrio aquaticus has been explored for its potential in biofuel production. Its metabolic pathways can be leveraged to convert organic materials into biofuels through fermentation, providing a sustainable alternative to fossil fuels. This process not only contributes to energy production but also aids in waste reduction by utilizing organic waste as a feedstock. In the pharmaceutical development sector, the unique biochemical properties of Vibrio aquaticus are being investigated for the production of bioactive compounds that may have therapeutic applications. The organism's ability to synthesize various metabolites can lead to the discovery of new drugs or health supplements. Overall, Vibrio aquaticus presents a versatile platform for innovation across multiple industries, particularly in biotechnology, waste management, biofuel production, and pharmaceutical development, showcasing its importance in sustainable industrial practices.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 10

LLM predicted phenotypes: 3

Phenotype	High-quality annotation	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	openai/gpt-4o	openai/gpt-4o	google/gemini-pro-1.5	meta-llama/llama-3-70b-instruct:nitro	microsoft/phi-3-mini-128k-instruct	mistralai/mixtral-8x7b-instruct:nitro	google/gemini-pro	anthropic/claude-3.5-sonnet	perplexity/llama-3-sonar-small-32k-chat	openchat/openchat-7b	mistralai/mistral-7b-instruct	openai/gpt-4	openai/gpt-4	google/gemini-flash-1.5	google/gemini-flash-1.5	anthropic/claude-3-haiku:beta	anthropic/claude-3-haiku:beta	google/gemma-7b-it	google/gemma-7b-it	meta-llama/llama-3-8b-instruct:nitro	meta-llama/llama-3-8b-instruct:nitro	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b
Motility	TRUE	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓
Gram staining	gram stain negative	N/A	gram stain negative ✓	N/A	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓
Aerophilicity	aerobic	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	N/A	facultatively anaerobic ✗	N/A	N/A	N/A	N/A	N/A	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓
Biofilm formation	N/A	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Animal pathogenicity	TRUE	true ✓	true ✓	true ✓	true ✓	false ✗	true ✓	true ✓	true ✓	true ✓	false ✗	true ✓	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓
Biosafety level	biosafety level 1	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗
Health association	N/A	true	true	true	true	true	true	true	true	true	false	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Host association	FALSE	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	N/A	beta	beta	beta	beta	N/A	beta	alpha	N/A	gamma	N/A	N/A	N/A	N/A	N/A	N/A	beta	beta	beta	beta	alpha	alpha	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	bacillus	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	spirillum ✗	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓

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