Vibrio ouci

General Information

Vibrio ouci is a fascinating microorganism that belongs to the genus Vibrio, which is well-known for its diverse and often ecologically significant species. One of the most intriguing aspects of Vibrio ouci is its bioluminescent properties. This organism produces light through a biochemical reaction involving the enzyme luciferase, which is a characteristic feature of several Vibrio species. The bioluminescence of Vibrio ouci is not only a captivating natural phenomenon but also holds potential applications in scientific research, particularly in the fields of molecular biology and environmental monitoring. Another notable feature of Vibrio ouci is its adaptability to various marine environments. This microorganism can thrive in a range of salinities and temperatures, making it a valuable model for studying microbial ecology and the effects of environmental changes on marine life. Its ability to adapt to different conditions also suggests potential uses in bioremediation, where it could help in the breakdown of pollutants in marine ecosystems. From a genomic perspective, Vibrio ouci possesses a highly versatile genetic toolkit. Its genome contains numerous genes associated with metabolic flexibility, allowing it to utilize a wide array of organic compounds as energy sources. This metabolic versatility is of great interest to researchers studying microbial metabolism and the potential for biotechnological applications, such as the production of biofuels or the degradation of complex organic pollutants. In summary, Vibrio ouci is a microorganism of significant interest due to its bioluminescent properties, environmental adaptability, and metabolic versatility. These characteristics make it a valuable subject for research in various scientific fields, including marine biology, environmental science, and biotechnology.

Vibrio ouci is a fascinating marine bacterium that has garnered attention due to its unique ecological niche and potential applications in biotechnology. This organism is primarily found in coastal waters and is known for its ability to thrive in saline environments, which makes it an important player in marine ecosystems. Its role in nutrient cycling and interactions with other marine organisms highlights its ecological significance. One of the most interesting aspects of Vibrio ouci is its production of bioactive compounds, which have been studied for their potential pharmaceutical applications. These compounds may possess antimicrobial properties, making Vibrio ouci a candidate for further research in the development of new antibiotics or other therapeutic agents. The exploration of these bioactive metabolites could lead to significant advancements in medical and environmental biotechnology. Additionally, Vibrio ouci is part of a larger group of Vibrio species that are known for their diverse metabolic capabilities. This diversity allows Vibrio ouci to adapt to various environmental conditions, making it a valuable organism for studies on microbial ecology and evolution. Understanding the genetic and metabolic pathways of Vibrio ouci can provide insights into how marine bacteria adapt to changing environments, which is increasingly relevant in the context of climate change. In summary, Vibrio ouci stands out not only for its ecological role in marine environments but also for its potential contributions to biotechnology and medicine. Its unique characteristics make it a subject of interest for researchers aiming to harness the power of marine microorganisms.

Taxonomy

Superkingdom: Bacteria

Phylum: Pseudomonadota

Class: Gammaproteobacteria

Order: Vibrionales

Family: Vibrionaceae

Genus: Vibrio

Species: Vibrio ouci

NCBI ID

2499078

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCF/004/551/525/GCF_004551525.1_ASM455152v1

File for sequence-based predictions:
GCF_004551525.1_ASM455152v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The organism Vibrio ouci is a marine bacterium that has been associated with various clinical implications, particularly in the context of infections in humans. It is part of the Vibrio genus, which includes several species known to cause gastroenteritis and wound infections. While Vibrio ouci is less commonly reported than its relatives, such as Vibrio cholerae, it has been implicated in cases of diarrheal disease and has been isolated from patients with gastrointestinal symptoms. Pathogenicity is attributed to its ability to produce toxins and adhere to intestinal mucosa, leading to inflammatory responses and fluid loss. In terms of antimicrobial resistance, there is limited data available, but like many Vibrio species, Vibrio ouci may exhibit resistance to commonly used antibiotics, which poses a challenge for treatment. This resistance can complicate the management of infections, particularly in immunocompromised individuals or those with underlying health conditions. The organism's interaction with the human body involves evasion of the immune response, which may include mechanisms such as biofilm formation and secretion of virulence factors that inhibit phagocytosis. Understanding these mechanisms is crucial for developing effective therapeutic strategies. While Vibrio ouci has not been extensively studied in the context of probiotics or vaccines, its relatives in the Vibrio genus have been explored for potential applications in aquaculture and food safety. Continued research into Vibrio ouci is necessary to fully elucidate its clinical significance and potential role in human health.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Vibrio ouci has shown potential in various industrial applications, particularly in the fields of biotechnology, waste management, and pharmaceutical development. This organism is known for its ability to thrive in marine environments, which can be harnessed for several beneficial processes. In biotechnology, Vibrio ouci can be utilized in fermentation processes to produce valuable metabolites. Its enzymatic activity is particularly noteworthy, as it can produce enzymes that are useful in the breakdown of complex organic materials, making it a candidate for applications in biodegradation and bioremediation. In the realm of waste management, Vibrio ouci has been studied for its capacity to degrade pollutants in marine environments. This includes the breakdown of hydrocarbons and other toxic compounds, which can be crucial for waste treatment processes aimed at cleaning up oil spills and other environmental contaminants. Furthermore, in pharmaceutical development, the metabolites produced by Vibrio ouci may have potential as bioactive compounds. Research into its secondary metabolites could lead to the discovery of new drugs or therapeutic agents, particularly those that can combat antibiotic-resistant bacteria. Overall, Vibrio ouci represents a promising microorganism with diverse applications across multiple industries, leveraging its natural capabilities for sustainable practices and innovative solutions.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 9

LLM predicted phenotypes: 4

Phenotype	High-quality annotation	meta-llama/llama-3-70b-instruct:nitro	openai/gpt-4o	openai/gpt-4o	google/gemini-pro-1.5	anthropic/claude-3.5-sonnet	meta-llama/llama-3-8b-instruct:nitro	google/gemini-flash-1.5	anthropic/claude-3-haiku:beta	google/gemini-pro	perplexity/llama-3-sonar-small-32k-chat	mistralai/mistral-7b-instruct	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	openai/gpt-4	openai/gpt-4	google/gemma-7b-it	google/gemma-7b-it	mistralai/mixtral-8x7b-instruct:nitro	mistralai/mixtral-8x7b-instruct:nitro	openchat/openchat-7b	openchat/openchat-7b	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b
Motility	TRUE	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓
Gram staining	gram stain negative	gram stain negative ✓	N/A	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓
Aerophilicity	N/A	facultatively anaerobic	facultatively anaerobic	facultatively anaerobic	facultatively anaerobic	N/A	N/A	N/A	N/A	N/A	N/A	N/A	facultatively anaerobic	facultatively anaerobic	N/A	N/A	facultatively anaerobic	facultatively anaerobic	N/A	N/A	facultatively anaerobic	facultatively anaerobic	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗
Biofilm formation	N/A	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	false	false	true	true
Animal pathogenicity	TRUE	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	false ✗	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓
Biosafety level	biosafety level 1	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗
Health association	N/A	true	true	true	true	true	true	true	true	true	true	false	false	false	true	true	false	false	true	true	true	true	true	true	false	false	true	true
Host association	FALSE	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	N/A	beta	beta	beta	N/A	beta	beta	beta	beta	gamma	N/A	N/A	N/A	N/A	beta	beta	N/A	N/A	alpha	alpha	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	bacillus	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	coccus ✗	coccus ✗	spirillum ✗	spirillum ✗	bacillus ✓	bacillus ✓

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