Niallia taxi

General Information

Niallia taxi is a fascinating bacterium that has garnered attention due to its unique ecological niche and potential applications. This microorganism was originally isolated from the surface of a taxicab, which is an unusual and intriguing habitat, suggesting its resilience and adaptability to diverse environments. One of the most noteworthy characteristics of Niallia taxi is its ability to thrive in environments that are typically hostile to other bacteria. This resilience makes it a subject of interest for studies on microbial survival and adaptation. Researchers are particularly interested in understanding the genetic and biochemical pathways that enable Niallia taxi to withstand such conditions, which could have broader implications for biotechnology and industrial applications. Additionally, Niallia taxi has shown potential in bioremediation. Its ability to survive and possibly degrade pollutants in urban environments opens up possibilities for its use in cleaning up contaminated sites. This makes it a valuable organism for environmental microbiology and ecological engineering. From a taxonomic perspective, Niallia taxi adds to the diversity of the genus Niallia, providing insights into the evolutionary pathways and genetic diversity within this group of bacteria. Its unique isolation source and characteristics make it a model organism for studying microbial ecology and evolution in anthropogenic environments. In summary, Niallia taxi is a bacterium of significant interest due to its resilience, potential bioremediation applications, and contribution to our understanding of microbial diversity and adaptation in urban settings.

Niallia taxi is a fascinating microorganism that has garnered attention due to its unique ecological niche and metabolic capabilities. This bacterium is known for its ability to thrive in environments rich in aromatic compounds, particularly those associated with the degradation of organic materials. Its metabolic versatility allows it to utilize a variety of carbon sources, making it a valuable organism for bioremediation efforts. One of the most interesting aspects of Niallia taxi is its potential role in the bioconversion of toxic compounds into less harmful substances. This characteristic positions it as a candidate for research in environmental microbiology, particularly in the context of pollution management. Studies have shown that it can effectively degrade certain pollutants, which could lead to innovative strategies for cleaning up contaminated sites. Additionally, Niallia taxi has been noted for its unique genetic makeup, which includes genes that are involved in the breakdown of complex organic molecules. This genetic diversity not only contributes to its adaptability but also makes it a subject of interest for genetic and metabolic engineering studies. Understanding the pathways and mechanisms employed by this organism could provide insights into microbial metabolism and its applications in biotechnology. In summary, Niallia taxi stands out due to its ecological significance, potential in bioremediation, and unique metabolic pathways, making it a valuable organism for ongoing research in environmental and applied microbiology.

Taxonomy

Superkingdom: Bacteria

Phylum: Bacillota

Class: Bacilli

Order: Bacillales

Family: Bacillaceae

Genus: Niallia

Species: Niallia taxi

NCBI ID

2499688

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCA/032/818/155/GCA_032818155.1_ASM3281815v1

File for sequence-based predictions:
GCA_032818155.1_ASM3281815v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The microorganism Niallia taxi is a lesser-known member of the microbial community, primarily associated with aquatic environments. While specific clinical implications of Niallia taxi in human health are not extensively documented, its presence in water systems raises concerns regarding potential infections in immunocompromised individuals. Pathogenicity is not well-established, but the organism's ability to survive in various environmental conditions suggests it could pose a risk under certain circumstances. Furthermore, its role in the ecosystem may influence the dynamics of other microbial populations, which could indirectly affect human health. Antimicrobial resistance has been observed in various aquatic microorganisms, and while specific resistance mechanisms for Niallia taxi are not well-characterized, the potential for resistance development in environmental bacteria is a growing concern. Overall, while Niallia taxi does not have a well-defined clinical profile, its environmental presence warrants further investigation to understand its potential implications for human health and disease.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Niallia taxi is a fascinating microorganism primarily associated with freshwater ecosystems and soil environments. This organism thrives in nutrient-rich habitats, often found in areas with abundant organic matter, such as decaying plant material and sediments. Its presence is particularly notable in wetlands and riverbanks, where it plays a crucial role in nutrient cycling and organic matter decomposition. In these freshwater biomes, Niallia taxi contributes to the breakdown of complex organic compounds, facilitating the release of nutrients back into the ecosystem. This process not only supports the growth of other microorganisms but also enhances the overall health of the aquatic environment. The organism exhibits a remarkable ability to adapt to varying levels of oxygen and nutrient availability, making it a resilient inhabitant of these dynamic habitats. Additionally, Niallia taxi may engage in symbiotic relationships with other microorganisms, such as bacteria and fungi, which can enhance its metabolic capabilities and survival in challenging conditions. These interactions are vital for maintaining the balance of microbial communities within its habitat. Overall, Niallia taxi exemplifies the intricate connections within freshwater ecosystems and underscores the importance of microorganisms in sustaining ecological health and resilience.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Niallia taxi has shown significant potential in various industrial applications. One of the primary areas of interest is in biotechnology, where Niallia taxi is utilized for its unique metabolic pathways that can be harnessed for the production of valuable biochemicals. This organism is known for its ability to perform fermentation, converting substrates into useful products such as organic acids and alcohols, which can be further processed for industrial use. In the realm of waste management, Niallia taxi has demonstrated capabilities in biodegradation, particularly in the breakdown of complex organic pollutants. This makes it a candidate for bioremediation efforts, where it can help in the detoxification of contaminated environments, such as soil and water bodies affected by industrial waste. Moreover, Niallia taxi has been explored for its role in biofuel production. Its metabolic processes can be optimized to enhance the yield of biofuels, such as ethanol or biodiesel, through fermentation of biomass feedstocks. This not only contributes to sustainable energy solutions but also aids in reducing reliance on fossil fuels. In the field of pharmaceutical development, Niallia taxi is being studied for its potential to produce novel compounds with therapeutic properties. The organism's enzymatic activity can be harnessed to synthesize complex molecules that may serve as precursors for drug development. Overall, Niallia taxi represents a versatile microorganism with promising applications across multiple industries, particularly in biotechnology, waste management, biofuel production, and pharmaceutical development, showcasing its importance in advancing sustainable industrial practices.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 9

LLM predicted phenotypes: 4

Phenotype	High-quality annotation	google/palm-2-chat-bison-32k	google/gemini-pro-1.5	anthropic/claude-3-haiku:beta	google/gemini-pro	meta-llama/llama-3-70b-instruct:nitro	mistralai/mixtral-8x7b-instruct:nitro	perplexity/llama-3-sonar-small-32k-chat	openchat/openchat-7b	anthropic/claude-3.5-sonnet	mistralai/mistral-7b-instruct	mistralai/mistral-7b-instruct	google/gemini-flash-1.5	google/gemini-flash-1.5	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	openai/gpt-4	openai/gpt-4	google/gemma-7b-it	google/gemma-7b-it	meta-llama/llama-3-8b-instruct:nitro	meta-llama/llama-3-8b-instruct:nitro	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	openai/gpt-4o	openai/gpt-4o	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct
Motility	TRUE	false ✗	true ✓	true ✓	true ✓	true ✓	false ✗	true ✓	false ✗	false ✗	false ✗	false ✗	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓	false ✗	false ✗
Gram staining	gram stain positive	gram stain negative ✗	gram stain negative ✗	gram stain negative ✗	gram stain negative ✗	gram stain negative ✗	gram stain positive ✓	gram stain positive ✓	gram stain variable ✗	gram stain positive ✓	N/A	gram stain variable ✗	N/A	gram stain negative ✗	N/A	gram stain negative ✗	N/A	gram stain negative ✗	N/A	gram stain negative ✗	N/A	gram stain negative ✗	N/A	gram stain negative ✗	N/A	gram stain positive ✓	N/A	gram stain negative ✗
Aerophilicity	aerobic	anaerobic ✗	facultatively anaerobic ✗	N/A	N/A	N/A	N/A	N/A	N/A	N/A	aerotolerant ✗	aerotolerant ✗	N/A	N/A	facultatively anaerobic ✗	facultatively anaerobic ✗	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Biofilm formation	N/A	false	true	true	true	true	true	true	false	true	false	false	true	true	true	true	false	false	true	true	true	true	true	true	true	true	false	false
Animal pathogenicity	N/A	false	true	true	false	false	false	true	false	false	false	false	true	true	false	false	false	false	true	true	false	false	false	false	false	false	false	false
Biosafety level	biosafety level 1	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓
Health association	N/A	false	true	true	true	true	true	true	false	true	false	false	true	true	false	false	false	false	true	true	true	true	true	true	false	false	false	false
Host association	FALSE	false ✓	true ✗	true ✗	false ✓	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	TRUE	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓	false ✗	false ✗
Hemolysis	N/A	N/A	N/A	beta	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	beta	beta	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	bacillus	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	coccus ✗	bacillus ✓	bacillus ✓	coccus ✗	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	coccus ✗	coccus ✗

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