Flavobacterium gawalongense

General Information

Flavobacterium gawalongense is a fascinating microorganism belonging to the genus Flavobacterium. This genus is known for its diverse metabolic capabilities and environmental adaptability. One of the most intriguing aspects of F. gawalongense is its ability to thrive in a variety of ecological niches, which makes it a subject of interest for environmental microbiologists. Unique Metabolic Pathways: F. gawalongense exhibits a range of metabolic pathways that allow it to degrade complex organic compounds. This capability is particularly valuable in bioremediation efforts, where the bacterium can be employed to break down pollutants in contaminated environments. Pigment Production: Another notable feature of F. gawalongense is its production of distinctive pigments. These pigments not only contribute to the bacterium's characteristic coloration but also have potential applications in biotechnology. For instance, they could be used as natural dyes or in the development of biosensors. Enzymatic Activity: The species is also known for its production of various enzymes, including proteases and lipases. These enzymes have significant industrial applications, ranging from the food industry to pharmaceuticals. The ability to produce such enzymes makes F. gawalongense a valuable resource for enzyme research and development. Ecological Role: In its natural habitat, F. gawalongense plays a crucial role in nutrient cycling. By breaking down organic matter, it contributes to the decomposition process and the recycling of nutrients, which is essential for maintaining ecosystem balance. Overall, Flavobacterium gawalongense stands out due to its metabolic versatility, pigment production, and enzymatic capabilities, making it a microorganism of considerable interest for both environmental and industrial applications.

Flavobacterium gawalongense is a fascinating bacterium belonging to the genus Flavobacterium, which is known for its diverse ecological roles and unique metabolic capabilities. This species was first isolated from a freshwater environment, highlighting its adaptability to aquatic ecosystems. One of the most interesting aspects of F. gawalongense is its ability to degrade complex organic compounds, making it a valuable organism for bioremediation studies. This characteristic positions it as a potential candidate for applications in environmental cleanup, particularly in the degradation of pollutants in freshwater systems. The genome of F. gawalongense has been sequenced, revealing a rich array of genes associated with the degradation of various organic materials, including polysaccharides and aromatic compounds. This genomic insight provides researchers with a deeper understanding of the metabolic pathways utilized by this bacterium, which can be leveraged in biotechnological applications. Additionally, F. gawalongense exhibits unique biochemical properties that differentiate it from other members of the Flavobacterium genus. Its enzymatic capabilities, particularly in the hydrolysis of complex carbohydrates, make it a subject of interest for studies focused on carbohydrate metabolism and enzyme engineering. The potential for enzyme production from F. gawalongense could have significant implications in industrial processes, such as biofuel production and waste management. Overall, Flavobacterium gawalongense stands out not only for its ecological significance but also for its potential applications in biotechnology and environmental science, making it a valuable organism for ongoing research.

Taxonomy

Superkingdom: Bacteria

Phylum: Bacteroidota

Class: Flavobacteriia

Order: Flavobacteriales

Family: Flavobacteriaceae

Genus: Flavobacterium

Species: Flavobacterium gawalongense

NCBI ID

2594432

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCF/007/097/285/GCF_007097285.1_ASM709728v1

File for sequence-based predictions:
GCF_007097285.1_ASM709728v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The bacterium Flavobacterium gawalongense is a member of the Flavobacteriaceae family, which is primarily known for its environmental presence rather than its clinical significance. However, its relevance in human health is emerging, particularly in the context of infections associated with immunocompromised individuals. While specific disease associations with F. gawalongense are not extensively documented, its close relatives have been implicated in opportunistic infections, particularly in patients with underlying health conditions. Pathogenicity may be attributed to its ability to form biofilms and resist phagocytosis, which are common traits among Flavobacterium species. Furthermore, there is a growing concern regarding antimicrobial resistance within this genus, as some species have shown resistance to multiple classes of antibiotics, complicating treatment options for infections. The potential for F. gawalongense to harbor and transfer resistance genes poses a significant risk in clinical settings, especially in nosocomial environments. In terms of medical applications, while F. gawalongense itself has not been directly linked to probiotics or therapeutic uses, the broader Flavobacterium genus is being studied for its role in the human microbiome and its potential benefits in maintaining gut health. Understanding the interactions of F. gawalongense with the human immune system, including its immune evasion strategies, is crucial for assessing its overall impact on human health. Continued research is necessary to fully elucidate the clinical implications of Flavobacterium gawalongense and its relatives.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Flavobacterium gawalongense is a bacterium primarily associated with freshwater ecosystems, particularly in environments characterized by high organic matter and nutrient-rich waters. This microorganism thrives in lakes, rivers, and wetlands, where it plays a crucial role in the decomposition of organic materials, contributing to nutrient cycling within these biomes. In these freshwater habitats, Flavobacterium gawalongense is often found in association with biofilms on submerged surfaces, where it interacts with other microbial communities. Its ability to degrade complex organic compounds makes it an important player in the breakdown of organic matter, thus facilitating the availability of nutrients for other organisms in the ecosystem. Moreover, this bacterium exhibits symbiotic relationships with various aquatic organisms, including algae and higher plants, where it can enhance nutrient uptake and promote overall ecosystem health. Its presence is indicative of a balanced and functioning aquatic environment, making it a valuable organism for studying freshwater ecology and microbial interactions. Overall, Flavobacterium gawalongense is a key component of freshwater biomes, contributing to the ecological dynamics and health of these environments through its roles in decomposition, nutrient cycling, and symbiotic relationships.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Flavobacterium gawalongense has shown potential in various industrial applications, particularly in the fields of biotechnology, waste management, and bioremediation. This organism is known for its ability to degrade complex organic compounds, making it valuable in waste treatment processes. Its enzymatic activity allows it to break down pollutants in contaminated environments, thus contributing to effective biodegradation strategies. In the realm of biotechnology, Flavobacterium gawalongense can be utilized in the production of specific enzymes that are essential for various industrial processes. These enzymes can facilitate fermentation processes, enhancing the efficiency of biofuel production by converting biomass into fermentable sugars. This capability positions the organism as a potential candidate for biofuel production, particularly in the development of sustainable energy sources. Moreover, the organism's metabolic pathways can be harnessed for the synthesis of valuable biochemicals, which can be applied in pharmaceutical development. The ability to produce bioactive compounds through fermentation processes opens avenues for the creation of novel drugs and therapeutic agents. Overall, Flavobacterium gawalongense demonstrates significant promise in enhancing industrial processes through its unique biochemical capabilities, particularly in waste management, biodegradation, and enzyme production.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 8

LLM predicted phenotypes: 5

Phenotype	High-quality annotation	google/gemini-pro-1.5	anthropic/claude-3-haiku:beta	meta-llama/llama-3-70b-instruct:nitro	mistralai/mixtral-8x7b-instruct:nitro	google/palm-2-chat-bison-32k	google/gemini-flash-1.5	perplexity/llama-3-sonar-small-32k-chat	openchat/openchat-7b	mistralai/mistral-7b-instruct	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	openai/gpt-4o	openai/gpt-4o	anthropic/claude-3.5-sonnet	anthropic/claude-3.5-sonnet	meta-llama/llama-3-8b-instruct:nitro	meta-llama/llama-3-8b-instruct:nitro	openai/gpt-4	openai/gpt-4	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	google/gemma-7b-it	google/gemma-7b-it	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct	google/gemini-pro	google/gemini-pro
Motility	FALSE	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗
Gram staining	gram stain negative	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓
Aerophilicity	aerobic	aerobic ✓	N/A	aerobic ✓	facultatively anaerobic ✗	N/A	N/A	N/A	N/A	N/A	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerotolerant ✗	aerotolerant ✗	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	TRUE	false ✗	true ✓	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	true ✓	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	true ✓	true ✓	false ✗	false ✗	false ✗	false ✗	true ✓	true ✓	false ✗	false ✗	false ✗	false ✗
Biofilm formation	N/A	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Animal pathogenicity	N/A	false	true	false	false	false	true	false	false	false	false	false	false	false	false	false	false	false	false	false	true	true	false	false	false	false	false	false
Biosafety level	biosafety level 1	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓
Health association	N/A	true	true	false	true	false	true	true	true	false	false	false	true	true	false	false	false	false	false	false	true	true	true	true	false	false	true	true
Host association	N/A	false	true	false	true	false	true	true	true	true	false	false	false	false	false	false	false	false	false	false	true	true	false	false	false	false	false	false
Plant pathogenicity	FALSE	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	N/A	N/A	alpha	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	bacillus	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	spirillum ✗	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓

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