Isoptericola halalbus

General Information

Isoptericola halalbus is a fascinating microorganism that has garnered attention due to its unique environmental adaptations and potential applications. This bacterium was originally isolated from a highly saline environment, which underscores its halotolerant nature. The ability to thrive in such extreme conditions makes Isoptericola halalbus particularly interesting for studies on microbial survival and adaptation mechanisms in high-salinity habitats. One of the most compelling aspects of Isoptericola halalbus is its potential for biotechnological applications. Its enzymes are likely to be stable and active under high salt concentrations, which can be incredibly valuable for industrial processes that require such conditions. This stability can be harnessed in the production of biocatalysts for chemical synthesis, waste treatment, and even in the food industry where high-salt environments are common. Moreover, the study of Isoptericola halalbus can provide insights into the evolutionary pathways that enable microorganisms to adapt to extreme environments. This can have broader implications for understanding microbial life on Earth and potentially on other planets with similar harsh conditions. In summary, Isoptericola halalbus stands out due to its halotolerance, potential biotechnological applications, and the valuable insights it offers into microbial adaptation and evolution.

Isoptericola halalbus is a fascinating actinobacterium that was first isolated from a halal food product, which highlights its unique association with food safety and microbiology. This organism is particularly interesting due to its ability to produce a variety of bioactive compounds, making it a potential candidate for biotechnological applications, especially in the food industry. The production of antimicrobial substances by I. halalbus could be leveraged to enhance food preservation and safety, providing a natural alternative to synthetic preservatives. Another remarkable aspect of I. halalbus is its adaptability to different environmental conditions, which suggests a robust metabolic versatility. This adaptability not only allows it to thrive in diverse habitats but also makes it a valuable model for studying microbial ecology and evolution. Research into its metabolic pathways could yield insights into how microorganisms interact with their environments and adapt to various stresses. Furthermore, the genomic analysis of I. halalbus has revealed genes associated with the synthesis of secondary metabolites, which are of great interest in pharmaceutical research. The potential for discovering novel compounds with therapeutic properties underscores the importance of this organism in the field of natural product chemistry. Overall, Isoptericola halalbus stands out as a unique microorganism with significant implications for food safety, biotechnology, and pharmaceutical research.

Taxonomy

Superkingdom: Bacteria

Phylum: Actinomycetota

Class: Actinomycetes

Order: Micrococcales

Family: Promicromonosporaceae

Genus: Isoptericola

Species: Isoptericola halalbus

NCBI ID

2594475

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCF/009/663/185/GCF_009663185.1_ASM966318v1

File for sequence-based predictions:
GCF_009663185.1_ASM966318v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The microorganism Isoptericola halalbus is a member of the Actinobacteria phylum and has been studied for its potential role in human health and disease. While specific clinical implications of Isoptericola halalbus are not extensively documented, its close relatives within the genus have been associated with various environmental and clinical contexts. Notably, Actinobacteria are known for their diverse metabolic capabilities and potential pathogenicity. In terms of pathogenicity, some species within the Actinobacteria phylum can be opportunistic pathogens, particularly in immunocompromised individuals. However, the specific pathogenic potential of Isoptericola halalbus remains to be fully elucidated. The organism's ability to produce antimicrobial compounds may also suggest a role in antimicrobial resistance mechanisms, although direct evidence linking Isoptericola halalbus to resistance profiles is limited. Furthermore, the interaction of Isoptericola halalbus with the human microbiome could have implications for human health, particularly in the context of gut health and the modulation of the immune response. Research into the use of Actinobacteria as probiotics is ongoing, and Isoptericola halalbus may contribute to this field, although specific studies are needed to confirm its efficacy and safety. Overall, while Isoptericola halalbus presents interesting avenues for research, its direct clinical relevance, including associations with infections, immune evasion strategies, or specific outbreaks, is not yet well-documented. Continued investigation into this organism may reveal further insights into its role in human health and disease.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Isoptericola halalbus is a bacterium that is primarily associated with marine environments, particularly in the context of marine sediments and coastal waters. This microorganism thrives in nutrient-rich habitats, often found in areas where organic matter is abundant, such as near mangroves and estuaries. Its presence is indicative of a healthy ecosystem, as it plays a crucial role in the degradation of organic materials, contributing to nutrient cycling within these biomes. In terms of ecological interactions, Isoptericola halalbus exhibits decomposing capabilities, breaking down complex organic compounds and thus facilitating the availability of nutrients for other organisms. This process is vital for maintaining the balance of the marine food web, as it supports the growth of primary producers like phytoplankton. Additionally, Isoptericola halalbus may engage in symbiotic relationships with other microorganisms, enhancing the overall microbial diversity and functionality of its habitat. Its adaptability to varying salinity levels and temperature ranges allows it to thrive in different coastal environments, making it a resilient component of the marine biome. Overall, Isoptericola halalbus is an important player in the marine ecosystem, contributing to both the health of its immediate environment and the broader ecological processes that sustain marine life.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Isoptericola halalbus has shown significant potential in various industrial applications. One of the primary areas of interest is in biotechnology, where Isoptericola halalbus is utilized for its ability to produce specific enzymes that can be harnessed in biocatalysis processes. These enzymes can facilitate chemical reactions under mild conditions, making them valuable in the production of pharmaceuticals and fine chemicals. In the realm of waste management, Isoptericola halalbus has demonstrated capabilities in biodegradation, particularly in the breakdown of complex organic compounds. This property is crucial for the treatment of industrial effluents and the remediation of contaminated environments, as it helps in reducing the environmental impact of waste products. Furthermore, the organism has potential applications in biofuel production. Through fermentation processes, Isoptericola halalbus can convert biomass into bioethanol or other biofuels, contributing to sustainable energy solutions. Its metabolic pathways are being studied to optimize the yield of biofuels from various feedstocks. In pharmaceutical development, the unique metabolic capabilities of Isoptericola halalbus can be exploited for the synthesis of bioactive compounds. This includes the production of secondary metabolites that may have therapeutic properties, thus opening avenues for new drug discovery. Overall, Isoptericola halalbus represents a versatile microorganism with promising applications across multiple industries, particularly in biotechnology, waste management, biofuel production, and pharmaceutical development.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 8

LLM predicted phenotypes: 5

Phenotype	High-quality annotation	openai/gpt-3.5-turbo-0125	anthropic/claude-3.5-sonnet	google/gemini-flash-1.5	anthropic/claude-3-haiku:beta	meta-llama/llama-3-70b-instruct:nitro	perplexity/llama-3-sonar-small-32k-chat	google/gemma-7b-it	mistralai/mixtral-8x7b-instruct:nitro	mistralai/mistral-7b-instruct	openai/gpt-4o	openai/gpt-4o	google/gemini-pro-1.5	google/gemini-pro-1.5	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	openai/gpt-4	openai/gpt-4	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	google/gemini-pro	google/gemini-pro	meta-llama/llama-3-8b-instruct:nitro	meta-llama/llama-3-8b-instruct:nitro	openchat/openchat-7b	openchat/openchat-7b	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct
Motility	FALSE	true ✗	false ✓	true ✗	false ✓	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓
Gram staining	gram stain positive	gram stain positive ✓	gram stain positive ✓	gram stain negative ✗	gram stain positive ✓	gram stain positive ✓	gram stain negative ✗	gram stain negative ✗	gram stain positive ✓	gram stain negative ✗	N/A	gram stain positive ✓	N/A	gram stain negative ✗	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain negative ✗	N/A	gram stain negative ✗	N/A	gram stain negative ✗
Aerophilicity	N/A	facultatively anaerobic	aerobic	N/A	N/A	N/A	N/A	N/A	N/A	N/A	aerobic	aerobic	aerobic	aerobic	aerobic	aerobic	aerobic	aerobic	aerobic	aerobic	aerobic	aerobic	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	false ✓	true ✗	false ✓	true ✗	true ✗	false ✓	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Biofilm formation	N/A	true	false	true	true	true	true	true	true	false	false	false	false	false	true	true	false	false	true	true	false	false	true	true	false	false	false	false
Animal pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Biosafety level	biosafety level 1	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓
Health association	N/A	false	false	false	true	true	true	true	false	true	false	false	true	true	true	true	false	false	true	true	true	true	true	true	false	false	false	false
Host association	FALSE	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	N/A	N/A	N/A	gamma	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	N/A	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	coccus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	coccus	coccus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	coccus	coccus

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