Streptomyces qinzhouensis

General Information

Streptomyces qinzhouensis is a fascinating microorganism belonging to the genus Streptomyces, which is renowned for its prolific production of bioactive compounds. One of the most intriguing aspects of S. qinzhouensis is its ability to produce novel antibiotics and secondary metabolites. This makes it a valuable subject of study in the field of natural product chemistry and pharmaceutical research. Streptomyces species are well-known for their complex life cycle and filamentous growth, which resemble fungal mycelia. This characteristic is particularly interesting because it allows for the formation of a dense network of hyphae, facilitating the exploration of soil environments and the decomposition of organic matter. The potential of S. qinzhouensis to produce unique and potent antimicrobial agents is of significant interest, especially in the context of rising antibiotic resistance. Researchers are keen to explore its genome and metabolic pathways to identify and harness these bioactive compounds. Additionally, S. qinzhouensis contributes to soil health and nutrient cycling, playing a crucial role in the ecosystem. Its ability to degrade complex organic materials and produce enzymes that break down plant biomass is another area of research that holds promise for applications in biotechnology and sustainable agriculture. In summary, Streptomyces qinzhouensis is a microorganism of great interest due to its potential in antibiotic production, its complex and adaptive life cycle, and its ecological importance. These characteristics make it a valuable organism for ongoing and future scientific research.

Streptomyces qinzhouensis is a fascinating actinobacterium that was first isolated from soil samples in Qinzhou, China. This organism is particularly notable for its ability to produce a diverse array of bioactive secondary metabolites, which are of great interest in pharmaceutical research. The genus Streptomyces is renowned for its role in natural product biosynthesis, and S. qinzhouensis contributes to this legacy with its unique metabolic capabilities. One of the most intriguing aspects of S. qinzhouensis is its potential for antibiotic production. Like many of its relatives, it has been shown to synthesize compounds that exhibit antimicrobial properties, making it a valuable candidate for the discovery of new antibiotics in the face of rising antibiotic resistance. Additionally, S. qinzhouensis has been studied for its ability to degrade environmental pollutants, showcasing its potential in bioremediation efforts. This characteristic not only highlights its ecological importance but also opens avenues for research into sustainable practices for managing contaminated environments. The organism's genetic and metabolic pathways are also of significant interest, as they can provide insights into the mechanisms of secondary metabolite production. Understanding these pathways can lead to the engineering of strains with enhanced production capabilities or the discovery of novel compounds with therapeutic potential. In summary, Streptomyces qinzhouensis stands out due to its bioactive compound production, potential in antibiotic discovery, and role in environmental bioremediation, making it a valuable subject for ongoing research in microbiology and biotechnology.

Taxonomy

Superkingdom: Bacteria

Phylum: Actinomycetota

Class: Actinomycetes

Order: Kitasatosporales

Family: Streptomycetaceae

Genus: Streptomyces

Species: Streptomyces qinzhouensis

NCBI ID

2599401

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCF/007/856/155/GCF_007856155.1_ASM785615v1

File for sequence-based predictions:
GCF_007856155.1_ASM785615v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The organism Streptomyces qinzhouensis is a member of the genus Streptomyces, which is known for its significant role in the production of antibiotics and other bioactive compounds. While specific clinical implications of Streptomyces qinzhouensis are not extensively documented, its relatives have been associated with various beneficial and pathogenic properties. Antibiotic production is one of the most notable aspects, as members of this genus are responsible for the synthesis of over two-thirds of naturally derived antibiotics, including streptomycin and tetracycline. This highlights the potential of Streptomyces qinzhouensis in the development of new antimicrobial agents, particularly in the face of rising antimicrobial resistance (AMR) among pathogenic bacteria. In terms of human health, the metabolites produced by Streptomyces qinzhouensis could be explored for their therapeutic applications, including their use as probiotics or in vaccine development. The organism's ability to produce secondary metabolites may also play a role in modulating the immune response, although specific studies on this species are limited. Furthermore, the ecological role of Streptomyces qinzhouensis in soil and its interactions with other microorganisms could have implications for bioremediation and agricultural health, potentially influencing plant health and disease resistance. However, more research is needed to fully elucidate the clinical relevance and pathogenicity of Streptomyces qinzhouensis, as well as its mechanisms of immune evasion and any associations with infections or outbreaks.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Streptomyces qinzhouensis is a species of actinobacteria that is primarily found in soil ecosystems and is particularly associated with tropical and subtropical environments. This microorganism thrives in nutrient-rich terrestrial habitats, where it plays a crucial role in the decomposition of organic matter, contributing to nutrient cycling and soil health. Its ability to produce a variety of bioactive compounds makes it significant in the context of soil microbiomes, where it can influence the growth of plants and other microorganisms through its interactions. In these soil environments, Streptomyces qinzhouensis engages in antibiotic production, which helps it compete with other microbial species, thus maintaining a balance within the ecosystem. This competitive advantage allows it to thrive in diverse habitats, from agricultural soils to natural forests. Additionally, it may form symbiotic relationships with plants, enhancing their growth and resistance to pathogens, which underscores its importance in agroecosystems and natural ecosystems alike. Overall, Streptomyces qinzhouensis exemplifies the intricate interactions within soil biomes, highlighting its role in promoting ecological balance and supporting biodiversity.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Streptomyces qinzhouensis has shown significant potential in various industrial applications due to its unique metabolic capabilities. One of the most notable areas is in biotechnology, where Streptomyces qinzhouensis is utilized for its ability to produce a wide range of bioactive compounds, including antibiotics and enzymes. This organism is particularly valuable in the fermentation process, where it can be harnessed to synthesize secondary metabolites that have pharmaceutical relevance. In the realm of waste management, Streptomyces qinzhouensis has demonstrated effective biodegradation capabilities, particularly in the breakdown of complex organic pollutants. This makes it a candidate for use in bioremediation strategies aimed at cleaning up contaminated environments, such as soil and water polluted with industrial waste. Furthermore, the organism's enzymatic activity is of great interest in biofuel production. It can be involved in the degradation of lignocellulosic biomass, facilitating the conversion of agricultural waste into fermentable sugars, which can then be transformed into biofuels like ethanol. This process not only contributes to sustainable energy solutions but also promotes the efficient use of waste materials. Overall, Streptomyces qinzhouensis stands out as a versatile microorganism with promising applications in pharmaceutical development, biotechnology, waste management, and biofuel production, making it a valuable asset in various industrial sectors.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 10

LLM predicted phenotypes: 3

Phenotype	High-quality annotation	anthropic/claude-3.5-sonnet	google/gemini-flash-1.5	meta-llama/llama-3-70b-instruct:nitro	google/gemma-7b-it	google/gemini-pro	meta-llama/llama-3-8b-instruct:nitro	perplexity/llama-3-sonar-small-32k-chat	mistralai/mixtral-8x7b-instruct:nitro	mistralai/mistral-7b-instruct	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	openai/gpt-4o	openai/gpt-4o	google/gemini-pro-1.5	google/gemini-pro-1.5	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	openai/gpt-4	openai/gpt-4	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	anthropic/claude-3-haiku:beta	anthropic/claude-3-haiku:beta	openchat/openchat-7b	openchat/openchat-7b	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct
Motility	FALSE	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Gram staining	gram stain positive	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain negative ✗	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓
Aerophilicity	aerobic	aerobic ✓	N/A	aerobic ✓	N/A	aerobic ✓	N/A	N/A	N/A	N/A	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	true ✗	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗
Biofilm formation	N/A	true	true	true	true	true	true	true	true	false	true	true	true	true	true	true	true	true	true	true	true	true	true	true	false	false	true	true
Animal pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Biosafety level	biosafety level 1	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗
Health association	N/A	true	false	true	true	true	false	true	true	false	false	false	true	true	true	true	true	true	true	true	true	true	true	true	false	false	false	false
Host association	FALSE	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	TRUE	true ✓	true ✓	true ✓	false ✗	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓
Hemolysis	N/A	N/A	gamma	N/A	alpha	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	tail	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗

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