Bacteroides luhongzhouii

General Information

Bacteroides luhongzhouii is a fascinating microorganism that belongs to the genus Bacteroides, which is known for its significant role in the human gut microbiome. This species is particularly interesting due to its potential implications in human health and disease. One of the most notable characteristics of Bacteroides luhongzhouii is its ability to break down complex molecules, such as polysaccharides, which are abundant in the human diet. This capability is crucial for the digestion and absorption of nutrients, making it an essential player in maintaining gut health. Moreover, Bacteroides luhongzhouii has been studied for its interactions with the host immune system. It has been observed to modulate immune responses, which can have both beneficial and detrimental effects depending on the context. For instance, while it can help in maintaining immune homeostasis, imbalances in its population may contribute to inflammatory conditions or other gut-related diseases. From a research perspective, Bacteroides luhongzhouii is valuable due to its potential use in probiotic therapies. By understanding its metabolic pathways and interactions with the host, scientists aim to harness its properties to develop treatments for various gastrointestinal disorders. Additionally, its genetic makeup provides insights into the evolutionary adaptations of gut bacteria, offering a broader understanding of microbial ecology and evolution. In summary, Bacteroides luhongzhouii stands out due to its metabolic versatility, immune-modulating properties, and potential therapeutic applications, making it a significant subject of study in microbiology and medical research.

Bacteroides luhongzhouii is a fascinating member of the Bacteroides genus, notable for its role in the human gut microbiome. This species was first isolated from the feces of a healthy individual, highlighting its presence in the normal gut flora. What makes B. luhongzhouii particularly interesting is its potential contribution to human health and disease. Underlining its significance, B. luhongzhouii has been studied for its ability to metabolize complex carbohydrates, which can influence gut health and overall metabolism. This metabolic capability is crucial, as it helps in the fermentation of dietary fibers, producing short-chain fatty acids (SCFAs) that are beneficial for colonic health and may play a role in reducing inflammation. Moreover, B. luhongzhouii has garnered attention in research due to its potential interactions with the immune system. Understanding how this species interacts with host immune responses could provide insights into its role in maintaining gut homeostasis and its implications in various gastrointestinal diseases. Additionally, the genomic analysis of B. luhongzhouii has revealed unique genetic traits that may contribute to its adaptability in the gut environment. This adaptability is essential for survival in the competitive microbial ecosystem of the intestines, making it a valuable subject for studies on microbial ecology and evolution. In summary, Bacteroides luhongzhouii stands out not only for its metabolic capabilities but also for its potential implications in health and disease, making it a significant organism for ongoing microbiome research.

Taxonomy

Superkingdom: Bacteria

Phylum: Bacteroidota

Class: Bacteroidia

Order: Bacteroidales

Family: Bacteroidaceae

Genus: Bacteroides

Species: Bacteroides luhongzhouii

NCBI ID

2650158

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCF/009/193/295/GCF_009193295.2_ASM919329v2

File for sequence-based predictions:
GCF_009193295.2_ASM919329v2_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The microorganism Bacteroides luhongzhouii is a member of the Bacteroides genus, which is known for its role in the human gut microbiome. This organism is particularly significant due to its potential implications in human health and disease associations. It has been identified in various studies as a contributor to the overall balance of gut flora, which is essential for maintaining intestinal health and immune function. Clinical relevance of Bacteroides luhongzhouii includes its association with inflammatory bowel disease (IBD) and other gastrointestinal disorders. Alterations in the abundance of Bacteroides species, including B. luhongzhouii, have been linked to dysbiosis, which can exacerbate conditions like Crohn's disease and ulcerative colitis. In terms of pathogenicity, while Bacteroides luhongzhouii is generally considered a commensal organism, it can become opportunistic under certain conditions, particularly in immunocompromised individuals. This raises concerns about its potential role in infections when the gut barrier is compromised. Moreover, Bacteroides species are known for their ability to exhibit antimicrobial resistance, particularly to beta-lactam antibiotics. This resistance is often attributed to the production of beta-lactamases, which can complicate treatment options for infections caused by these organisms. On a positive note, some strains of Bacteroides, including B. luhongzhouii, are being explored for their potential as probiotics, which may help restore gut microbiota balance and improve gut health. Research is ongoing to determine the specific benefits and applications of this organism in therapeutic contexts, including its role in vaccine development and therapeutics aimed at enhancing gut health and modulating the immune response. Overall, while Bacteroides luhongzhouii is primarily recognized for its beneficial roles in the gut, its potential pathogenicity and resistance mechanisms warrant further investigation to fully understand its clinical implications.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Bacteroides luhongzhouii is a species of bacteria that primarily inhabits the human gastrointestinal tract. This organism plays a crucial role in the complex microbial ecosystem of the gut, contributing to the breakdown of complex carbohydrates and the fermentation of dietary fibers. Its presence is essential for maintaining a balanced gut microbiome, which is vital for overall health and digestion. Ecological Niches: Within the gut, Bacteroides luhongzhouii occupies a specific niche where it interacts with other microbial species. It is known to engage in mutualistic relationships with the host, aiding in nutrient absorption and the synthesis of essential vitamins. This bacterium can also help in the modulation of the immune system, promoting a healthy inflammatory response. Habitats: The primary habitat for Bacteroides luhongzhouii is the large intestine, where it thrives in an anaerobic environment. This bacterium is well-adapted to the low-oxygen conditions of the gut, utilizing fermentation pathways to metabolize substrates that are otherwise indigestible by human enzymes. Environmental Adaptation: Bacteroides luhongzhouii exhibits remarkable adaptability to varying dietary conditions, which allows it to flourish in diverse dietary environments. Its ability to degrade polysaccharides from plant materials makes it particularly important in diets rich in fiber. Furthermore, it can respond to changes in the gut environment, such as pH fluctuations and the presence of other microbial species, ensuring its survival and functionality. Overall, Bacteroides luhongzhouii is a vital component of the gut microbiome, contributing to the health of its host and playing a significant role in the intricate web of interactions within the human gastrointestinal ecosystem.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Bacteroides luhongzhouii has shown significant potential in various industrial applications, particularly in the fields of biotechnology and waste management. This organism is known for its role in biodegradation, where it can effectively break down complex organic materials, making it valuable in the treatment of organic waste. Its ability to metabolize polysaccharides and other complex carbohydrates can be harnessed in waste treatment processes, contributing to the reduction of landfill waste and the enhancement of composting methods. In the realm of biofuel production, Bacteroides luhongzhouii can be utilized in fermentation processes to convert biomass into bioethanol. By breaking down lignocellulosic materials, this microorganism aids in the efficient conversion of agricultural residues into renewable energy sources, thus promoting sustainable energy practices. Furthermore, the enzymatic activity of Bacteroides luhongzhouii is noteworthy, as it produces various enzymes that can be applied in pharmaceutical development. These enzymes can be used in the synthesis of bioactive compounds, which are crucial for drug formulation and development. The organism's metabolic pathways can also be explored for the production of probiotics, enhancing gut health and offering therapeutic benefits. Overall, Bacteroides luhongzhouii presents a multifaceted approach to addressing environmental challenges and advancing industrial processes, making it a valuable asset in modern biotechnology and sustainable practices.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 10

LLM predicted phenotypes: 3

Phenotype	High-quality annotation	meta-llama/llama-3-8b-instruct:nitro	google/gemini-flash-1.5	meta-llama/llama-3-70b-instruct:nitro	openchat/openchat-7b	perplexity/llama-3-sonar-small-32k-chat	google/gemma-7b-it	mistralai/mixtral-8x7b-instruct:nitro	google/gemini-pro	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	openai/gpt-4o	openai/gpt-4o	google/gemini-pro-1.5	google/gemini-pro-1.5	anthropic/claude-3.5-sonnet	anthropic/claude-3.5-sonnet	openai/gpt-4	openai/gpt-4	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	mistralai/mistral-7b-instruct	mistralai/mistral-7b-instruct	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	anthropic/claude-3-haiku:beta	anthropic/claude-3-haiku:beta	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct
Motility	FALSE	true ✗	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓
Gram staining	gram stain negative	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓
Aerophilicity	anaerobic	aerotolerant ✗	N/A	anaerobic ✓	anaerobic ✓	N/A	N/A	N/A	N/A	anaerobic ✓	anaerobic ✓	anaerobic ✓	anaerobic ✓	anaerobic ✓	anaerobic ✓	anaerobic ✓	anaerobic ✓	anaerobic ✓	anaerobic ✓	anaerobic ✓	anaerobic ✓	anaerobic ✓	anaerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓
Biofilm formation	N/A	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	false	false
Animal pathogenicity	N/A	false	true	true	false	true	false	true	true	false	false	true	true	false	false	false	false	false	false	true	true	false	false	true	true	true	true	false	false
Biosafety level	biosafety level 1	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓
Health association	N/A	true	true	true	true	true	true	true	true	false	false	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	false	false
Host association	TRUE	true ✓	true ✓	true ✓	true ✓	true ✓	false ✗	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	gamma	N/A	gamma ✓	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	bacillus	bacillus ✓	bacillus ✓	bacillus ✓	coccus ✗	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	coccus ✗	coccus ✗

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