Rouxiella aceris

General Information

Rouxiella aceris is a fascinating microorganism that has garnered attention due to its unique ecological niche and potential applications in biotechnology. This bacterium was first isolated from the sap of the sugar maple tree (Acer saccharum), which is a notable detail as it highlights the organism's adaptation to a specific and somewhat unusual environment. One of the key characteristics of Rouxiella aceris is its ability to thrive in the nutrient-rich, sugary environment of maple sap. This adaptation suggests that the bacterium may possess specialized metabolic pathways for processing sugars, which could be of interest for research into biofuel production or other biotechnological applications. Additionally, Rouxiella aceris is part of the family Yersiniaceae, which includes several other bacteria of medical and industrial importance. This phylogenetic placement hints at the potential for discovering novel bioactive compounds or enzymes that could have pharmaceutical or industrial uses. The discovery of Rouxiella aceris also underscores the importance of exploring diverse and under-studied environments for new microbial species. The unique ecological niche of this bacterium makes it a valuable subject for studies on microbial ecology, symbiosis, and the evolution of metabolic diversity. In summary, Rouxiella aceris is an intriguing bacterium with significant potential for advancing our understanding of microbial ecology and for developing new biotechnological applications. Its unique habitat and metabolic capabilities make it a prime candidate for further research.

Rouxiella aceris is a fascinating bacterium primarily associated with the phloem of various tree species, particularly those in the genus Acer (maples). This organism is notable for its role in the ecology of trees, as it is involved in the degradation of plant materials and contributes to nutrient cycling within forest ecosystems. Its ability to thrive in the phloem environment makes it an important player in the interactions between trees and their microbial communities. One of the unique aspects of Rouxiella aceris is its potential to influence tree health and growth. Research has shown that this bacterium can affect the physiological processes of its host trees, which may have implications for forest management and conservation strategies. Understanding the symbiotic relationships that Rouxiella aceris forms with its host can provide insights into how trees adapt to environmental stressors. Additionally, Rouxiella aceris has garnered interest in the field of biotechnology. Its metabolic pathways may be harnessed for the development of bioproducts or bioremediation strategies, particularly in the context of plant-associated microorganisms. The study of this bacterium could lead to advancements in sustainable agriculture and forestry practices. Overall, Rouxiella aceris stands out not only for its ecological significance but also for its potential applications in research and industry, making it a valuable subject for further study in microbial ecology and plant-microbe interactions.

Taxonomy

Superkingdom: Bacteria

Phylum: Pseudomonadota

Class: Gammaproteobacteria

Order: Enterobacterales

Family: Yersiniaceae

Genus: Rouxiella

Species: Rouxiella aceris

NCBI ID

2703884

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCA/012/933/545/GCA_012933545.1_ASM1293354v1

File for sequence-based predictions:
GCA_012933545.1_ASM1293354v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The bacterium Rouxiella aceris is primarily known for its association with plant diseases, particularly in trees such as the sugar maple. While its direct implications for human health are not extensively documented, its role in the environment can indirectly affect human health through the ecosystem's balance. The presence of Rouxiella aceris in certain environments may indicate a disruption in microbial communities, which can lead to increased susceptibility of plants to other pathogens, potentially affecting food sources and biodiversity. In terms of pathogenicity, Rouxiella aceris has been implicated in the decline of certain tree species, which can have cascading effects on local ecosystems and human activities reliant on these trees. However, there is currently no well-documented evidence linking Rouxiella aceris to human infections or diseases. Regarding antimicrobial resistance, there is limited information available on this organism, and it is not recognized as a significant pathogen in clinical settings. Therefore, its relevance in terms of antibiotic resistance mechanisms remains largely unexplored. Overall, while Rouxiella aceris does not have direct clinical implications for human health, its ecological role and potential impact on plant health highlight the interconnectedness of microbial life and human environments.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Rouxiella aceris is a bacterium primarily associated with the phyllosphere of various plants, particularly those in the family Aceraceae, such as maples. This microorganism thrives in the terrestrial biome, where it occupies a unique ecological niche on the surfaces of leaves. The phyllosphere is characterized by its dynamic microenvironment, which includes varying levels of moisture, light, and temperature, making it a challenging habitat for many organisms. In this habitat, Rouxiella aceris plays a critical role in nutrient cycling and plant health. It is known to engage in symbiotic relationships with its host plants, potentially aiding in the breakdown of organic matter and enhancing nutrient availability. This interaction can lead to improved plant growth and resilience against pathogens. Furthermore, Rouxiella aceris contributes to the microbial diversity of the phyllosphere, which is essential for maintaining ecological balance. Its presence can influence the composition of other microbial communities, showcasing its importance in the ecosystem dynamics of forested areas. Overall, the habitats associated with Rouxiella aceris are vital for understanding plant-microbe interactions and the broader implications for forest ecology and health.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Rouxiella aceris has shown potential in various industrial applications, particularly in the fields of biotechnology and waste management. This bacterium is known for its ability to degrade complex organic compounds, making it a candidate for biodegradation processes in contaminated environments. Its enzymatic activity allows it to break down pollutants, which can be harnessed for effective waste treatment solutions. In the realm of biofuel production, Rouxiella aceris can be involved in fermentation processes that convert biomass into bioethanol. By utilizing its metabolic pathways, this organism can help in the efficient conversion of agricultural waste into renewable energy sources, thus contributing to sustainable energy initiatives. Moreover, the potential of Rouxiella aceris in pharmaceutical development is noteworthy. Its unique metabolic capabilities may lead to the discovery of novel compounds that can be used in drug formulation or as biocatalysts in pharmaceutical synthesis. The exploration of its secondary metabolites could yield valuable insights into new therapeutic agents. Overall, Rouxiella aceris presents a promising avenue for innovation in environmental biotechnology, renewable energy, and healthcare, showcasing its versatility and importance in modern industrial applications.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 9

LLM predicted phenotypes: 4

Phenotype	High-quality annotation	google/gemini-flash-1.5	mistralai/mixtral-8x7b-instruct:nitro	anthropic/claude-3-haiku:beta	meta-llama/llama-3-70b-instruct:nitro	google/gemma-7b-it	openchat/openchat-7b	mistralai/mistral-7b-instruct	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	openai/gpt-4o	openai/gpt-4o	google/gemini-pro-1.5	google/gemini-pro-1.5	anthropic/claude-3.5-sonnet	anthropic/claude-3.5-sonnet	meta-llama/llama-3-8b-instruct:nitro	meta-llama/llama-3-8b-instruct:nitro	openai/gpt-4	openai/gpt-4	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	perplexity/llama-3-sonar-small-32k-chat	perplexity/llama-3-sonar-small-32k-chat	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct	google/gemini-pro	google/gemini-pro
Motility	TRUE	true ✓	false ✗	true ✓	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓
Gram staining	gram stain negative	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain variable ✗	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain variable ✗	N/A	gram stain negative ✓
Aerophilicity	N/A	N/A	facultatively anaerobic	N/A	N/A	N/A	N/A	N/A	facultatively anaerobic	facultatively anaerobic	facultatively anaerobic	facultatively anaerobic	facultatively anaerobic	facultatively anaerobic	facultatively anaerobic	facultatively anaerobic	aerotolerant	aerotolerant	aerobic	aerobic	aerobic	aerobic	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	false ✓	false ✓	true ✗	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Biofilm formation	N/A	true	true	true	true	true	false	true	true	true	true	true	true	true	true	true	true	true	false	false	false	false	true	true	true	true	false	false	true	true
Animal pathogenicity	TRUE	false ✗	false ✗	false ✗	false ✗	false ✗	true ✓	true ✓	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	true ✓	true ✓	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗
Biosafety level	biosafety level 1	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓
Health association	N/A	true	true	true	true	false	true	true	false	false	true	true	true	true	true	true	false	false	true	true	true	true	true	true	true	true	false	false	true	true
Host association	TRUE	false ✗	true ✓	false ✗	false ✗	false ✗	true ✓	true ✓	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗
Plant pathogenicity	TRUE	true ✓	false ✗	true ✓	true ✓	false ✗	false ✗	false ✗	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	N/A	gamma	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	bacillus	bacillus ✓	coccus ✗	bacillus ✓	bacillus ✓	bacillus ✓	coccus ✗	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	coccus ✗	coccus ✗	bacillus ✓	bacillus ✓

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