Metabacillus schmidteae

General Information

Metabacillus schmidteae is a fascinating microorganism that has garnered attention due to its unique metabolic capabilities and potential applications in biotechnology. This bacterium is particularly notable for its ability to thrive in diverse environmental conditions, which makes it a subject of interest for studies on microbial ecology and environmental adaptation. One of the key characteristics of M. schmidteae is its proficiency in breaking down complex organic compounds. This metabolic versatility is not only crucial for its survival in various habitats but also positions it as a valuable candidate for bioremediation efforts. Researchers are exploring its potential to degrade pollutants and contribute to environmental cleanup processes. Additionally, Metabacillus schmidteae has shown promise in the field of industrial microbiology. Its robust enzymatic machinery can be harnessed for the production of biofuels and other biochemicals, offering a sustainable alternative to traditional chemical synthesis methods. The bacterium's ability to produce a range of enzymes, including those involved in the degradation of lignocellulosic biomass, underscores its potential in the development of renewable energy sources. From a genetic perspective, M. schmidteae is intriguing due to its relatively large genome, which encodes a diverse array of metabolic pathways. This genetic diversity provides a rich resource for the discovery of novel enzymes and metabolic processes that could have significant industrial and environmental applications. In summary, Metabacillus schmidteae stands out as a microorganism of considerable interest due to its metabolic diversity, environmental resilience, and biotechnological potential. Ongoing research into its capabilities and applications continues to reveal new insights and opportunities for leveraging this bacterium in various scientific and industrial domains.

Metabacillus schmidteae is a fascinating bacterium that belongs to the genus Metabacillus, which is known for its unique metabolic capabilities. This organism is particularly interesting due to its ability to thrive in extreme environments, showcasing remarkable resilience and adaptability. One of the standout features of M. schmidteae is its capacity to utilize a variety of substrates for energy production, including complex carbohydrates and organic acids. This metabolic versatility makes it a valuable organism for research in bioremediation and waste treatment processes, where the breakdown of diverse organic materials is essential. Additionally, M. schmidteae has been studied for its potential applications in the food industry, particularly in fermentation processes. Its ability to produce specific enzymes can enhance the flavor and texture of fermented products, making it a candidate for use in food biotechnology. The organism's genetic makeup has also attracted attention, as researchers explore its genome for insights into the evolutionary adaptations that allow it to survive in challenging conditions. Furthermore, M. schmidteae contributes to our understanding of microbial ecology, particularly in environments where it coexists with other microorganisms. Its interactions with other species can provide valuable information on community dynamics and nutrient cycling. Overall, Metabacillus schmidteae stands out as a unique and valuable organism in microbiological research, with implications for environmental science, food technology, and evolutionary biology.

Taxonomy

Superkingdom: Bacteria

Phylum: Bacillota

Class: Bacilli

Order: Bacillales

Family: Bacillaceae

Genus: Metabacillus

Species: Metabacillus schmidteae

NCBI ID

2730405

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCA/903/166/545/GCA_903166545.1_P9898

File for sequence-based predictions:
GCA_903166545.1_P9898_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The microorganism Metabacillus schmidteae is a member of the gut microbiota and has been studied for its potential role in human health. It is primarily associated with the fermentation of dietary fibers and the production of short-chain fatty acids (SCFAs), which are beneficial for gut health and may play a role in immune modulation. Research indicates that M. schmidteae can contribute to the maintenance of a balanced gut microbiome, which is crucial for preventing dysbiosis and associated diseases such as inflammatory bowel disease (IBD) and obesity. In terms of pathogenicity, there is limited evidence suggesting that M. schmidteae may have a role in certain gastrointestinal disorders, but it is not typically classified as a pathogen. Its presence in the gut is generally considered beneficial, and it may even be explored for use in probiotic formulations aimed at enhancing gut health. However, the potential for antimicrobial resistance has not been extensively studied in M. schmidteae, and more research is needed to understand its resistance mechanisms, if any. The organism's interaction with the human body appears to be largely symbiotic, promoting health rather than causing disease. Overall, while Metabacillus schmidteae is not widely recognized for causing infections or outbreaks, its role in gut health and potential applications in therapeutics and probiotics make it a subject of interest in microbiome research.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Metabacillus schmidteae is a bacterium commonly associated with various terrestrial environments and anaerobic conditions. This microorganism thrives particularly in soil ecosystems and fermented food products, where it plays a significant role in the breakdown of organic matter. Its presence is often noted in environments rich in plant material and animal waste, contributing to nutrient cycling and soil health. In soil biomes, Metabacillus schmidteae engages in decomposition, breaking down complex organic compounds into simpler forms that can be utilized by other organisms. This process not only enriches the soil but also enhances its fertility, making it crucial for plant growth. The bacterium is known to form symbiotic relationships with certain plants, aiding in nutrient uptake and promoting overall plant health. In fermented environments, such as those found in traditional food production, Metabacillus schmidteae contributes to the fermentation process, helping to produce essential flavors and preserving food. Its metabolic activities can influence the texture and taste of fermented products, showcasing its importance in both ecological and culinary contexts. Overall, Metabacillus schmidteae exemplifies the intricate connections within microbial communities, highlighting its role in nutrient cycling, symbiosis, and environmental adaptation in various biomes.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Metabacillus schmidteae has shown significant potential in various industrial applications. One of the primary areas of interest is in biotechnology, where it is utilized for its ability to perform fermentation. This process is crucial in the production of various fermented foods and beverages, contributing to flavor development and preservation. Additionally, Metabacillus schmidteae is known for its role in waste management, particularly in the biodegradation of organic materials. Its enzymatic activity allows it to break down complex waste products, making it valuable in waste treatment facilities aimed at reducing environmental impact. Furthermore, this microorganism has been explored for its potential in biofuel production, where it can assist in the conversion of biomass into biofuels through fermentation processes, enhancing the efficiency of biofuel generation. In the realm of pharmaceutical development, Metabacillus schmidteae may contribute to the production of bioactive compounds, which can be harnessed for therapeutic purposes. Overall, the diverse capabilities of Metabacillus schmidteae in these industrial sectors highlight its importance as a versatile microorganism in modern biotechnology.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 8

LLM predicted phenotypes: 5

Phenotype	High-quality annotation	google/gemini-flash-1.5	mistralai/mistral-7b-instruct	anthropic/claude-3.5-sonnet	google/palm-2-chat-bison-32k	perplexity/llama-3-sonar-small-32k-chat	meta-llama/llama-3-70b-instruct:nitro	google/gemma-7b-it	mistralai/mixtral-8x7b-instruct:nitro	google/gemini-pro	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	google/gemini-pro-1.5	google/gemini-pro-1.5	anthropic/claude-3-haiku:beta	anthropic/claude-3-haiku:beta	openai/gpt-4o	openai/gpt-4o	meta-llama/llama-3-8b-instruct:nitro	meta-llama/llama-3-8b-instruct:nitro	openai/gpt-4	openai/gpt-4	openchat/openchat-7b	openchat/openchat-7b	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b
Motility	TRUE	false ✗	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	false ✗	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓
Gram staining	gram stain positive	gram stain positive ✓	gram stain variable ✗	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain negative ✗	gram stain positive ✓	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain negative ✗	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain variable ✗	N/A	gram stain positive ✓
Aerophilicity	aerobic	N/A	aerotolerant ✗	N/A	N/A	N/A	N/A	N/A	N/A	N/A	facultatively anaerobic ✗	facultatively anaerobic ✗	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	true ✗	true ✗	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓
Biofilm formation	N/A	true	true	true	true	true	true	true	true	true	true	true	false	false	true	true	true	true	true	true	false	false	true	true	true	true	true	true
Animal pathogenicity	N/A	false	false	false	false	false	false	true	false	false	false	false	false	false	true	true	false	false	false	false	false	false	false	false	false	false	true	true
Biosafety level	biosafety level 1	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗
Health association	N/A	false	false	false	true	true	true	true	true	true	false	false	false	false	true	true	false	false	true	true	false	false	true	true	true	true	true	true
Host association	N/A	false	true	false	false	true	true	false	false	false	false	false	false	false	true	true	false	false	true	true	false	false	false	false	true	true	true	true
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓
Spore formation	TRUE	true ✓	true ✓	true ✓	false ✗	true ✓	true ✓	false ✗	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	false ✗	false ✗	true ✓	true ✓
Hemolysis	N/A	gamma	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	beta	beta	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	bacillus	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓

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