Gordonia jinghuaiqii

General Information

Gordonia jinghuaiqii is a fascinating microorganism belonging to the genus Gordonia, which is known for its diverse metabolic capabilities and environmental resilience. One of the most intriguing aspects of G. jinghuaiqii is its ability to degrade a wide range of complex organic compounds, making it a valuable candidate for bioremediation efforts. This species has shown potential in breaking down pollutants such as polycyclic aromatic hydrocarbons (PAHs), which are common environmental contaminants resulting from industrial activities and fossil fuel combustion. G. jinghuaiqii also exhibits a unique cell wall structure that includes mycolic acids, contributing to its robustness and resistance to harsh environmental conditions. This characteristic is shared among members of the Gordonia genus and is a key factor in their survival and adaptability. From a research perspective, G. jinghuaiqii is particularly interesting due to its genetic and enzymatic diversity. The organism's genome encodes a variety of enzymes that can catalyze the breakdown of complex molecules, which is of significant interest for industrial applications, including the production of biofuels and the synthesis of valuable biochemicals. In summary, Gordonia jinghuaiqii stands out for its biodegradation capabilities, environmental resilience, and potential industrial applications, making it a subject of ongoing scientific research and interest.

Gordonia jinghuaiqii is a fascinating actinobacterial species that has garnered attention due to its unique metabolic capabilities and ecological significance. This microorganism is particularly interesting because it is known for its ability to degrade a variety of complex organic compounds, including those found in industrial waste. This characteristic makes it a potential candidate for bioremediation applications, where it could be utilized to clean up contaminated environments, particularly those polluted with hydrocarbons and other recalcitrant substances. One of the standout features of Gordonia jinghuaiqii is its capacity to thrive in extreme conditions, which is indicative of its robust enzymatic systems. The enzymes produced by this species are capable of breaking down tough substrates, which not only highlights its adaptability but also opens avenues for research into enzyme engineering and industrial applications. Additionally, Gordonia jinghuaiqii has been studied for its potential in the production of bioactive compounds. The secondary metabolites derived from this organism may possess antimicrobial properties, making it a valuable resource in the search for new antibiotics and other therapeutic agents. This aspect of Gordonia jinghuaiqii underscores its importance in pharmaceutical research and development. Furthermore, the phylogenetic position of Gordonia jinghuaiqii within the genus Gordonia adds to its intrigue, as it contributes to our understanding of microbial diversity and evolution. The genomic studies of this species can provide insights into the genetic basis of its unique metabolic pathways and its interactions with other microorganisms in its natural habitat. In summary, Gordonia jinghuaiqii stands out due to its bioremediation potential, extreme adaptability, and ability to produce bioactive compounds, making it a significant subject of study in environmental microbiology and biotechnology.

Taxonomy

Superkingdom: Bacteria

Phylum: Actinomycetota

Class: Actinomycetes

Order: Mycobacteriales

Family: Gordoniaceae

Genus: Gordonia

Species: Gordonia jinghuaiqii

NCBI ID

2758710

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/041/935/GCA_014041935.1_ASM1404193v1

File for sequence-based predictions:
GCA_014041935.1_ASM1404193v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The microorganism Gordonia jinghuaiqii is a member of the Gordonia genus, which is known for its environmental resilience and ability to degrade various organic compounds. While specific clinical implications of Gordonia jinghuaiqii are not extensively documented, its close relatives have been associated with human health and disease. Clinical relevance may arise from its potential role in infections, particularly in immunocompromised patients. Some species within the Gordonia genus have been implicated in opportunistic infections, including skin and soft tissue infections, respiratory infections, and even endocarditis. The pathogenicity of Gordonia jinghuaiqii may be linked to its ability to evade the immune response, although detailed mechanisms remain to be elucidated. Furthermore, certain Gordonia species exhibit antimicrobial resistance, particularly to beta-lactam antibiotics, which poses a challenge in clinical settings. This resistance is often attributed to the presence of specific genes that confer the ability to break down or modify antibiotics, complicating treatment options. In terms of medical applications, while Gordonia jinghuaiqii itself has not been directly linked to probiotics or therapeutic uses, the broader Gordonia genus has been studied for its potential in bioremediation and environmental applications. Understanding the interactions of Gordonia jinghuaiqii with the human body and its potential pathogenicity is crucial for assessing its overall impact on human health.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Gordonia jinghuaiqii is a species of actinobacteria that is primarily associated with soil environments and wastewater treatment systems. This microorganism thrives in aerobic conditions, often found in environments rich in organic matter, such as compost heaps and activated sludge from sewage treatment plants. Its ability to degrade complex organic compounds, particularly xenobiotics and polycyclic aromatic hydrocarbons (PAHs), makes it a crucial player in bioremediation processes, helping to detoxify contaminated environments. In its natural habitat, Gordonia jinghuaiqii exhibits notable interactions with other microorganisms, forming part of a diverse microbial community that contributes to nutrient cycling and organic matter decomposition. This species can engage in symbiotic relationships with plants, enhancing soil health and promoting plant growth by improving nutrient availability. Furthermore, Gordonia jinghuaiqii demonstrates remarkable environmental adaptation capabilities, allowing it to survive in harsh conditions, such as high levels of pollutants or varying pH levels. Its resilience and metabolic versatility underscore its importance in maintaining ecological balance in its native biomes, particularly in polluted soils and industrial wastewater environments.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Gordonia jinghuaiqii has shown significant potential in various industrial applications. Notably, it is recognized for its role in biodegradation, particularly in the breakdown of complex organic compounds, which makes it valuable in waste management processes. This organism can effectively degrade pollutants such as polycyclic aromatic hydrocarbons (PAHs), contributing to the remediation of contaminated environments. In the realm of biotechnology, Gordonia jinghuaiqii is utilized for its unique enzymatic activities. It produces specific enzymes that can be harnessed in biocatalysis, facilitating various chemical reactions in industrial processes. This capability is particularly beneficial in the production of biodegradable plastics and other sustainable materials. Furthermore, the organism has been explored for its potential in biofuel production. Through fermentation processes, Gordonia jinghuaiqii can convert organic waste into biofuels, providing an eco-friendly alternative to fossil fuels. This application not only aids in energy production but also contributes to waste reduction. In pharmaceutical development, the metabolic pathways of Gordonia jinghuaiqii are being studied for the production of bioactive compounds that may have therapeutic properties. The organism's ability to synthesize various secondary metabolites could lead to the discovery of new drugs or health supplements. Overall, Gordonia jinghuaiqii exemplifies the versatility of microorganisms in addressing environmental challenges and advancing industrial processes, making it a valuable asset in modern biotechnology and sustainable practices.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 11

LLM predicted phenotypes: 2

Phenotype	High-quality annotation	google/gemini-pro-1.5	anthropic/claude-3.5-sonnet	google/gemini-flash-1.5	google/gemini-flash-1.5	meta-llama/llama-3-8b-instruct:nitro	anthropic/claude-3-haiku:beta	perplexity/llama-3-sonar-small-32k-chat	openchat/openchat-7b	mistralai/mixtral-8x7b-instruct:nitro	mistralai/mistral-7b-instruct	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	openai/gpt-4o	openai/gpt-4o	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	openai/gpt-4	openai/gpt-4	meta-llama/llama-3-70b-instruct:nitro	meta-llama/llama-3-70b-instruct:nitro	google/gemma-7b-it	google/gemma-7b-it	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	google/gemini-pro	google/gemini-pro	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct
Motility	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗
Gram staining	gram stain positive	gram stain positive ✓	gram stain positive ✓	N/A	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain negative ✗	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain variable ✗
Aerophilicity	aerobic	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A
Extreme environment tolerance	FALSE	true ✗	false ✓	true ✗	true ✗	false ✓	true ✗	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Biofilm formation	N/A	false	true	true	true	true	true	true	false	true	true	true	true	true	true	true	true	false	false	true	true	true	true	true	true	true	true	true	true
Animal pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓
Biosafety level	biosafety level 1	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗
Health association	N/A	false	false	true	true	false	true	true	false	true	false	false	false	false	false	true	true	false	false	true	true	true	true	true	true	true	true	false	false
Host association	FALSE	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗
Spore formation	FALSE	false ✓	false ✓	true ✗	true ✗	true ✗	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	gamma	N/A	N/A	gamma ✓	gamma ✓	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	alpha ✗	alpha ✗	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	bacillus	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	coccus ✗	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	coccus ✗	coccus ✗	bacillus ✓	bacillus ✓	coccus ✗	coccus ✗

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