Limosilactobacillus agrestis

General Information

Limosilactobacillus agrestis is a fascinating microorganism that belongs to the lactic acid bacteria group. One of the key characteristics of this species is its ability to produce lactic acid through the fermentation of carbohydrates, which is a trait that makes it valuable in various industrial and food applications. This bacterium is particularly interesting due to its adaptability to different environments. It has been isolated from a variety of sources, including plant material and the gastrointestinal tracts of animals, indicating its versatile metabolic capabilities. From a research perspective, Limosilactobacillus agrestis is notable for its potential probiotic properties. Studies have suggested that it may contribute to gut health by balancing the microbiota and inhibiting pathogenic bacteria. This makes it a candidate for inclusion in functional foods and dietary supplements aimed at improving digestive health. Another unique aspect of Limosilactobacillus agrestis is its genomic diversity. The genome of this species reveals a wide array of genes involved in carbohydrate metabolism, stress response, and adhesion to host tissues. This genetic versatility not only underscores its ecological adaptability but also provides insights into its potential applications in biotechnology and medicine. In summary, Limosilactobacillus agrestis stands out due to its lactic acid production, environmental adaptability, probiotic potential, and genomic diversity, making it a valuable subject of study in microbiology and biotechnology.

Limosilactobacillus agrestis is a fascinating species of lactic acid bacteria that has garnered attention for its unique ecological niche and potential applications in food science and biotechnology. This organism is primarily isolated from fermented foods and plant materials, indicating its role in traditional fermentation processes. Its ability to thrive in diverse environments makes it a valuable subject for studying microbial ecology and fermentation dynamics. One of the most interesting aspects of Limosilactobacillus agrestis is its metabolic versatility. It can utilize a variety of carbohydrates, which allows it to adapt to different substrates found in its natural habitats. This characteristic not only contributes to its survival but also enhances its potential use in the production of fermented products, such as yogurt and other dairy items, where it can improve flavor and texture. Moreover, Limosilactobacillus agrestis is known for its probiotic properties. Research has indicated that it may possess health benefits, including the modulation of gut microbiota and potential anti-inflammatory effects. This makes it a candidate for further studies in the field of gut health and nutrition, particularly in the development of functional foods. In addition to its health benefits, this species is also of interest in the context of biotechnology. Its ability to produce lactic acid can be harnessed for various industrial applications, including the production of biodegradable plastics and as a preservative in food products. The exploration of its metabolic pathways could lead to innovative methods for sustainable production processes. Overall, Limosilactobacillus agrestis stands out not only for its ecological significance but also for its potential contributions to health and industry, making it a valuable organism for ongoing research and application in various fields.

Taxonomy

Superkingdom: Bacteria

Phylum: Bacillota

Class: Bacilli

Order: Lactobacillales

Family: Lactobacillaceae

Genus: Limosilactobacillus

Species: Limosilactobacillus agrestis

NCBI ID

2759748

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/145/585/GCA_014145585.1_ASM1414558v1

File for sequence-based predictions:
GCA_014145585.1_ASM1414558v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The microorganism Limosilactobacillus agrestis is a member of the Lactobacillus genus, which is known for its role in human health, particularly in the gut microbiome. This organism is associated with several beneficial effects on human health, including the modulation of the immune response and the maintenance of gut health. It is often found in fermented foods and is considered a potential probiotic, contributing to the balance of the gut microbiota and potentially preventing gastrointestinal infections. In terms of pathogenicity, Limosilactobacillus agrestis is generally regarded as non-pathogenic; however, its role in the gut microbiome can influence the susceptibility to various diseases. For instance, a healthy balance of Lactobacillus species, including L. agrestis, is crucial in preventing dysbiosis, which can lead to conditions such as inflammatory bowel disease (IBD) and irritable bowel syndrome (IBS). Moreover, this organism may exhibit some degree of antimicrobial resistance, which is an important consideration in the context of probiotics. While it is not typically associated with severe resistance mechanisms, understanding its resistance profile is essential for ensuring the safety and efficacy of probiotic applications. In clinical settings, Limosilactobacillus agrestis has been studied for its potential use in therapeutics aimed at restoring gut flora after antibiotic treatment or during episodes of gastroenteritis. Its ability to produce lactic acid and other metabolites can inhibit the growth of pathogenic bacteria, thereby supporting gut health. Overall, while Limosilactobacillus agrestis is not directly linked to specific outbreaks or severe infections, its role as a probiotic and its interactions with the human microbiome underscore its importance in maintaining health and preventing disease.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Limosilactobacillus agrestis is a species of lactic acid bacteria commonly found in various fermented food products and natural environments. This microorganism thrives particularly in agricultural soils and plant materials, where it plays a significant role in the fermentation processes of fruits and vegetables. Its presence is often associated with the fermentation of cereal grains and dairy products, contributing to the development of flavors and preservation of these foods. In terms of ecological niches, Limosilactobacillus agrestis is frequently isolated from grasslands and pastures, where it interacts with plant roots and contributes to the microbial diversity of the soil. This bacterium is known for its ability to adapt to varying environmental conditions, including changes in pH and temperature, which allows it to thrive in diverse habitats. Notably, Limosilactobacillus agrestis engages in symbiotic relationships with other microorganisms, enhancing the fermentation process and improving the nutritional value of the substrates it colonizes. Its metabolic activities can lead to the production of beneficial compounds, such as vitamins and bioactive peptides, which can positively influence the health of both plants and animals in its ecosystem. Overall, Limosilactobacillus agrestis is an important player in the microbial community of agricultural and natural environments, contributing to soil health, plant growth, and the fermentation of various food products.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Limosilactobacillus agrestis has shown significant potential in various industrial applications. One of the primary areas is in biotechnology, where it is utilized in fermentation processes to produce lactic acid, a valuable compound in food preservation and the production of biodegradable plastics. This organism is particularly effective in fermenting plant-based substrates, making it a candidate for sustainable practices in food technology. In the realm of waste management, Limosilactobacillus agrestis can play a role in biodegradation processes, helping to break down organic waste materials. Its ability to thrive in diverse environments allows it to contribute to the microbial communities that facilitate the decomposition of waste, thus enhancing composting efficiency and reducing landfill contributions. Furthermore, this microorganism is being explored for its potential in biofuel production. Through fermentation, it can convert sugars derived from biomass into ethanol, providing a renewable energy source. This application is particularly relevant in the context of reducing reliance on fossil fuels and promoting sustainable energy solutions. In pharmaceutical development, Limosilactobacillus agrestis is recognized for its probiotic properties, which can be harnessed in the formulation of dietary supplements and functional foods aimed at improving gut health. Its role in enzyme production also opens avenues for the development of biocatalysts used in various industrial processes, including food processing and textile manufacturing. Overall, the versatility of Limosilactobacillus agrestis in these applications underscores its importance in advancing sustainable practices across multiple industries.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 8

LLM predicted phenotypes: 5

Phenotype	High-quality annotation	anthropic/claude-3.5-sonnet	google/gemini-pro-1.5	meta-llama/llama-3-8b-instruct:nitro	google/gemini-flash-1.5	meta-llama/llama-3-70b-instruct:nitro	perplexity/llama-3-sonar-small-32k-chat	google/gemma-7b-it	openchat/openchat-7b	google/gemini-pro	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	openai/gpt-4	openai/gpt-4	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct	mistralai/mixtral-8x7b-instruct:nitro	mistralai/mixtral-8x7b-instruct:nitro	mistralai/mistral-7b-instruct	mistralai/mistral-7b-instruct	openai/gpt-4o	openai/gpt-4o	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	anthropic/claude-3-haiku:beta	anthropic/claude-3-haiku:beta	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b
Motility	FALSE	false ✓	false ✓	true ✗	false ✓	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Gram staining	gram stain positive	gram stain positive ✓	gram stain positive ✓	gram stain negative ✗	gram stain positive ✓	gram stain positive ✓	gram stain negative ✗	gram stain negative ✗	gram stain positive ✓	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain variable ✗	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓
Aerophilicity	anaerobic	facultatively anaerobic ✗	facultatively anaerobic ✗	aerotolerant ✗	N/A	facultatively anaerobic ✗	N/A	N/A	N/A	N/A	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓
Biofilm formation	N/A	true	true	true	true	true	true	true	false	true	true	true	true	true	true	true	true	true	false	false	true	true	true	true	true	true	true	true
Animal pathogenicity	N/A	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	true	true
Biosafety level	biosafety level 1	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓
Health association	N/A	true	true	true	true	true	true	false	false	true	false	false	true	true	false	false	true	true	true	true	true	true	true	true	true	true	true	true
Host association	N/A	true	true	true	true	true	true	false	false	true	false	false	false	false	true	true	true	true	true	true	true	true	false	false	false	false	true	true
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	N/A	gamma	N/A	N/A	gamma	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	bacillus	bacillus ✓	bacillus ✓	coccus ✗	bacillus ✓	bacillus ✓	coccus ✗	bacillus ✓	coccus ✗	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	coccus ✗	coccus ✗	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓

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