Pseudomonas kielensis

General Information

Pseudomonas kielensis is a fascinating microorganism belonging to the genus Pseudomonas. This bacterium is particularly interesting due to its metabolic versatility and environmental adaptability. Pseudomonas kielensis has been isolated from diverse environments, indicating its ability to thrive under various conditions. One of the most notable features of Pseudomonas kielensis is its potential for bioremediation. This organism can degrade a wide range of organic pollutants, making it a valuable candidate for cleaning up contaminated environments. Its ability to break down complex compounds is attributed to its diverse enzymatic repertoire, which allows it to utilize different substrates as energy sources. Additionally, Pseudomonas kielensis exhibits antibiotic resistance mechanisms, which are of significant interest in medical and environmental microbiology. Understanding these mechanisms can provide insights into combating antibiotic-resistant pathogens and developing new antimicrobial strategies. From a research perspective, the study of Pseudomonas kielensis can contribute to advancements in environmental biotechnology and microbial ecology. Its adaptability and metabolic capabilities make it a model organism for studying microbial interactions and survival strategies in various ecosystems. Overall, Pseudomonas kielensis stands out due to its biotechnological potential and the role it can play in addressing environmental and health-related challenges.

Pseudomonas kielensis is a fascinating bacterium that has garnered attention due to its unique metabolic capabilities and ecological significance. This species is part of the diverse genus Pseudomonas, known for its versatility in various environments, particularly in soil and aquatic ecosystems. One of the most interesting aspects of P. kielensis is its ability to degrade a wide range of organic compounds, including some that are toxic or recalcitrant, making it a valuable organism for bioremediation efforts. This characteristic positions P. kielensis as a potential candidate for environmental cleanup applications, particularly in areas contaminated with industrial pollutants. In addition to its bioremediation potential, P. kielensis has been studied for its role in the nitrogen cycle. It can participate in nitrogen fixation, which is crucial for maintaining soil fertility and supporting plant growth. This ability to contribute to nutrient cycling highlights its ecological importance and potential agricultural applications. Furthermore, P. kielensis exhibits a remarkable adaptability to various environmental conditions, which is a hallmark of the Pseudomonas genus. This adaptability not only allows it to thrive in diverse habitats but also makes it a subject of interest in studies related to microbial ecology and evolution. Researchers are particularly intrigued by the genetic and biochemical pathways that enable such versatility, which could lead to advancements in biotechnology and environmental science. Overall, Pseudomonas kielensis stands out as a unique organism with significant implications for both ecological research and practical applications in environmental management.

Taxonomy

Superkingdom: Bacteria

Phylum: Pseudomonadota

Class: Gammaproteobacteria

Order: Pseudomonadales

Family: Pseudomonadaceae

Genus: Pseudomonas

Species: Pseudomonas kielensis

NCBI ID

2762577

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCF/030/505/375/GCF_030505375.1_ASM3050537v1

File for sequence-based predictions:
GCF_030505375.1_ASM3050537v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The organism Pseudomonas kielensis is a member of the Pseudomonas genus, which is known for its environmental versatility and clinical significance. While specific studies on Pseudomonas kielensis are limited, its close relatives, particularly Pseudomonas aeruginosa, provide insight into potential clinical implications. This organism may be associated with infections in immunocompromised patients, particularly in those with underlying conditions such as cystic fibrosis or burns. Pathogenicity is often linked to its ability to form biofilms, which can lead to chronic infections that are difficult to treat. Furthermore, like other Pseudomonas species, Pseudomonas kielensis may exhibit antimicrobial resistance, complicating treatment options. Resistance mechanisms may include the production of beta-lactamases and efflux pumps, which can render common antibiotics ineffective. In terms of immune evasion, Pseudomonas species are known to produce various virulence factors that help them evade the host's immune response, such as exopolysaccharides that inhibit phagocytosis. While Pseudomonas kielensis itself has not been directly linked to any major outbreaks, its potential role in nosocomial infections and its environmental presence suggest that it could be a concern in healthcare settings. Overall, further research is needed to fully elucidate the clinical relevance of Pseudomonas kielensis, but its relationship with other Pseudomonas species indicates a potential for pathogenicity and infections in vulnerable populations.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Pseudomonas kielensis is a versatile bacterium commonly found in various marine environments and coastal ecosystems. This microorganism thrives in brackish waters and is often associated with sediment layers where it plays a crucial role in nutrient cycling. Its ability to degrade organic matter makes it an important player in the decomposition process, contributing to the overall health of the ecosystem. In addition to its role in nutrient cycling, Pseudomonas kielensis exhibits symbiotic relationships with other marine organisms, particularly in biofilm formation. These biofilms can provide a protective environment for other microorganisms and contribute to the stability of the ecosystem. The bacterium is also known for its ability to adapt to varying salinity levels, showcasing its resilience in fluctuating environmental conditions. Furthermore, Pseudomonas kielensis has been documented in polluted coastal areas, where it can assist in bioremediation efforts by breaking down harmful pollutants. This highlights its potential utility in environmental management and restoration projects, making it a significant organism in both natural and anthropogenically affected marine biomes.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Pseudomonas kielensis has shown significant potential in various industrial applications due to its versatile metabolic capabilities. One of the primary areas of interest is in biotechnology, where Pseudomonas kielensis is utilized in biodegradation processes. This organism is capable of breaking down complex organic compounds, making it valuable for the treatment of contaminated environments, particularly in the degradation of pollutants such as hydrocarbons and heavy metals. In the realm of waste management, Pseudomonas kielensis plays a crucial role in bioremediation, where it helps in the detoxification of hazardous waste sites. Its ability to metabolize toxic substances allows for the restoration of polluted ecosystems, contributing to environmental sustainability. Furthermore, this microorganism is being explored for its potential in biofuel production. Through fermentation processes, Pseudomonas kielensis can convert organic materials into biofuels, providing a renewable energy source that can help reduce reliance on fossil fuels. In pharmaceutical development, the enzymatic activities of Pseudomonas kielensis are of particular interest. The organism produces various enzymes that can be harnessed for the synthesis of pharmaceutical compounds, enhancing the efficiency of drug production processes. Overall, Pseudomonas kielensis demonstrates a wide range of applications across multiple industries, making it a valuable organism for future research and development in biotechnology, waste management, biofuel production, and pharmaceuticals.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 9

LLM predicted phenotypes: 4

Phenotype	High-quality annotation	anthropic/claude-3.5-sonnet	meta-llama/llama-3-8b-instruct:nitro	anthropic/claude-3-haiku:beta	google/gemini-flash-1.5	meta-llama/llama-3-70b-instruct:nitro	openchat/openchat-7b	google/gemma-7b-it	mistralai/mistral-7b-instruct	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	openai/gpt-4o	openai/gpt-4o	google/gemini-pro-1.5	google/gemini-pro-1.5	openai/gpt-4	openai/gpt-4	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	perplexity/llama-3-sonar-small-32k-chat	perplexity/llama-3-sonar-small-32k-chat	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	mistralai/mixtral-8x7b-instruct:nitro	mistralai/mixtral-8x7b-instruct:nitro	google/gemini-pro	google/gemini-pro
Motility	TRUE	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓
Gram staining	gram stain negative	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓
Aerophilicity	aerobic	aerobic ✓	aerotolerant ✗	N/A	N/A	N/A	N/A	N/A	N/A	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	false ✓	true ✗	true ✗	false ✓	true ✗	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓
Biofilm formation	N/A	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Animal pathogenicity	N/A	false	false	true	true	false	false	true	false	false	false	false	false	false	false	false	false	false	false	true	true	false	false	true	true	false	false	false	false
Biosafety level	biosafety level 1	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓
Health association	N/A	true	true	true	true	true	false	true	false	false	false	true	true	true	true	false	false	true	true	true	true	true	true	true	true	true	true	false	false
Host association	FALSE	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓
Plant pathogenicity	N/A	false	false	true	false	true	false	true	false	false	false	false	false	true	true	true	true	false	false	false	false	false	false	false	false	false	false	false	false
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	gamma	N/A	N/A	alpha ✗	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	bacillus	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓

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