Dyella telluris

General Information

Dyella telluris is a fascinating microorganism that belongs to the genus Dyella. This bacterium was first isolated from soil, which is reflected in its species name 'telluris', meaning 'of the earth'. One of the most intriguing aspects of Dyella telluris is its ability to degrade complex organic compounds, making it a subject of interest in environmental microbiology and bioremediation research. Dyella telluris has shown potential in the biodegradation of pollutants, including aromatic hydrocarbons, which are common environmental contaminants. This capability is particularly valuable for the development of sustainable methods to clean up contaminated environments. Additionally, the bacterium's metabolic versatility allows it to thrive in various soil environments, contributing to soil health and nutrient cycling. Another noteworthy feature of Dyella telluris is its production of secondary metabolites. These compounds can have antimicrobial properties, which opens up possibilities for discovering new antibiotics or other bioactive molecules. The study of these secondary metabolites can provide insights into novel biochemical pathways and mechanisms of microbial interaction. In summary, Dyella telluris is a microorganism of significant interest due to its environmental applications in bioremediation, its role in soil ecosystem dynamics, and its potential in natural product discovery. Its unique characteristics make it a valuable subject for ongoing and future research in various fields of microbiology and environmental science.

Dyella telluris is a fascinating bacterium belonging to the family of Comamonadaceae. This organism was first isolated from soil, highlighting its ecological significance and adaptability to terrestrial environments. One of the most interesting aspects of Dyella telluris is its ability to degrade various environmental pollutants, making it a potential candidate for bioremediation applications. This characteristic positions it as a valuable organism in the field of environmental microbiology, particularly in efforts to clean up contaminated sites. The metabolic versatility of Dyella telluris allows it to utilize a range of organic compounds, which is crucial for its survival in diverse habitats. This adaptability not only contributes to its ecological role but also makes it a subject of interest for researchers studying microbial metabolism and environmental interactions. Furthermore, its genetic and biochemical pathways are of particular interest for biotechnological applications, including the development of sustainable practices for waste management. In addition to its environmental applications, Dyella telluris has been studied for its potential in agricultural contexts, where it may play a role in promoting plant growth through various mechanisms, including nutrient cycling and disease suppression. This dual role in both environmental and agricultural settings underscores the importance of Dyella telluris in sustainable practices and ecosystem health. Overall, Dyella telluris exemplifies the intricate relationships between microorganisms and their environments, making it a valuable organism for ongoing research in microbiology and environmental science.

Taxonomy

Superkingdom: Bacteria

Phylum: Pseudomonadota

Class: Gammaproteobacteria

Order: Lysobacterales

Family: Rhodanobacteraceae

Genus: Dyella

Species: Dyella telluris

NCBI ID

2763498

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/297/575/GCA_014297575.1_ASM1429757v1

File for sequence-based predictions:
GCA_014297575.1_ASM1429757v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The bacterium Dyella telluris is a member of the family Rhizobiaceae and has been isolated from various environmental sources, including soil and water. While it is not commonly associated with human disease, there are some clinical implications worth noting. Dyella telluris has been identified in rare cases as a potential opportunistic pathogen, particularly in immunocompromised individuals. Its role in infections is not well-documented, but it has been linked to cases of bacteremia and other infections in patients with underlying health conditions. One of the significant concerns regarding Dyella telluris is its potential for antimicrobial resistance. Some studies have indicated that this organism may exhibit resistance to multiple classes of antibiotics, which complicates treatment options for infections it may cause. The mechanisms of resistance are not fully understood, but they may involve the production of beta-lactamases or other resistance genes that confer survival advantages in the presence of antimicrobial agents. In terms of immune evasion, Dyella telluris may possess strategies that allow it to survive within the host, although specific mechanisms have not been extensively studied. Its environmental origins suggest that it may have adaptations that facilitate its persistence in various niches, including human tissues under certain conditions. Overall, while Dyella telluris is not a well-known pathogen, its potential to cause infections in vulnerable populations and its associated antimicrobial resistance highlight the need for further research to fully understand its clinical relevance and implications in human health.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Dyella telluris is a species of bacteria that is primarily associated with soil environments and rhizosphere ecosystems. This microorganism thrives in nutrient-rich soils, where it plays a crucial role in the cycling of nutrients and organic matter. Its presence is often linked to the decomposition of organic materials, contributing to soil fertility and health. In the rhizosphere, Dyella telluris interacts closely with plant roots, forming beneficial relationships that can enhance plant growth. This symbiotic relationship is characterized by the bacterium's ability to promote nutrient uptake, particularly nitrogen and phosphorus, which are essential for plant development. The bacterium may also produce phytohormones that stimulate root growth and development, further enhancing its role in the ecosystem. Moreover, Dyella telluris exhibits remarkable environmental adaptability, allowing it to thrive in various soil types, including sandy, loamy, and clay soils. Its metabolic versatility enables it to utilize a wide range of organic compounds, making it a key player in the degradation of pollutants and organic waste in the environment. Overall, Dyella telluris is an important microorganism in terrestrial biomes, contributing to soil health, plant growth, and the overall functioning of terrestrial ecosystems.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Dyella telluris has shown significant potential in various industrial applications. One of the primary areas of interest is in biotechnology, where Dyella telluris is utilized for its ability to degrade complex organic compounds, making it valuable in waste management processes. This organism can effectively break down pollutants in contaminated soils and water, contributing to bioremediation efforts. In the realm of biofuel production, Dyella telluris has been studied for its capacity to ferment biomass, converting it into bioethanol and other biofuels. The organism's metabolic pathways allow it to utilize a variety of substrates, enhancing the efficiency of the fermentation process. Additionally, Dyella telluris has potential applications in pharmaceutical development due to its ability to produce bioactive compounds. Research has indicated that it can synthesize various secondary metabolites that may have therapeutic properties, making it a candidate for further exploration in drug discovery. Overall, the versatility of Dyella telluris in these industrial sectors highlights its importance as a microorganism with promising applications in environmental sustainability, energy production, and healthcare.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 9

LLM predicted phenotypes: 4

Phenotype	High-quality annotation	anthropic/claude-3.5-sonnet	meta-llama/llama-3-8b-instruct:nitro	google/gemini-flash-1.5	meta-llama/llama-3-70b-instruct:nitro	anthropic/claude-3-haiku:beta	perplexity/llama-3-sonar-small-32k-chat	google/gemma-7b-it	openchat/openchat-7b	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	openai/gpt-4o	openai/gpt-4o	google/gemini-pro-1.5	google/gemini-pro-1.5	openai/gpt-4	openai/gpt-4	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	mistralai/mixtral-8x7b-instruct:nitro	mistralai/mixtral-8x7b-instruct:nitro	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct	mistralai/mistral-7b-instruct	mistralai/mistral-7b-instruct	google/gemini-pro	google/gemini-pro
Motility	TRUE	true ✓	false ✗	true ✓	true ✓	true ✓	true ✓	true ✓	false ✗	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓
Gram staining	gram stain negative	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain variable ✗	N/A	gram stain negative ✓
Aerophilicity	aerobic	aerobic ✓	aerotolerant ✗	N/A	aerobic ✓	N/A	N/A	N/A	N/A	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Biofilm formation	N/A	true	true	true	true	true	true	true	false	true	true	true	true	false	false	true	true	true	true	true	true	true	true	true	true	false	false	true	true
Animal pathogenicity	N/A	false	false	false	false	false	false	true	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false
Biosafety level	biosafety level 1	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓
Health association	N/A	false	true	false	false	true	true	true	false	false	false	true	true	false	false	false	false	true	true	true	true	true	true	false	false	false	false	true	true
Host association	FALSE	false ✓	true ✗	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	N/A	N/A	N/A	gamma	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	bacillus	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	coccus ✗	bacillus ✓	coccus ✗	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	coccus ✗	coccus ✗	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓

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