Flavobacterium kayseriense

General Information

Flavobacterium kayseriense is a member of the genus Flavobacterium, which is known for its diverse metabolic capabilities and ecological significance. This particular species was first isolated from a freshwater environment, highlighting its adaptability to aquatic habitats. One of the key characteristics of F. kayseriense is its ability to degrade complex organic compounds, making it a valuable organism for studies in bioremediation and environmental microbiology. The genus Flavobacterium is also notable for its production of a variety of bioactive compounds, including enzymes and secondary metabolites, which can have applications in biotechnology and medicine. F. kayseriense may possess unique enzymatic activities that could be harnessed for industrial processes, such as the breakdown of pollutants or the synthesis of valuable biochemicals. Additionally, the study of F. kayseriense contributes to our understanding of microbial diversity and the roles these organisms play in their natural ecosystems. Its ability to thrive in freshwater environments suggests potential interactions with other microbial communities and aquatic organisms, which can be crucial for maintaining ecological balance. In summary, Flavobacterium kayseriense is an intriguing microorganism with significant potential for environmental and biotechnological applications, making it a subject of interest for researchers in various fields.

Flavobacterium kayseriense is a fascinating bacterium belonging to the genus Flavobacterium, which is known for its diverse ecological roles and unique metabolic capabilities. This species was first isolated from a freshwater environment, highlighting its adaptability to aquatic ecosystems. One of the most interesting aspects of F. kayseriense is its ability to degrade complex organic compounds, particularly those found in natural environments, which positions it as a potential candidate for bioremediation applications. This capability not only contributes to nutrient cycling in aquatic ecosystems but also offers valuable insights into microbial ecology and environmental sustainability. The organism is characterized by its production of yellow-pigmented colonies, which is a distinctive feature of many members of the Flavobacterium genus. This pigmentation is attributed to the presence of carotenoid-like compounds, which may play a role in protecting the cells from oxidative stress and UV radiation. Such adaptations are crucial for survival in fluctuating environmental conditions, making F. kayseriense a subject of interest for studies on microbial resilience. Additionally, F. kayseriense has been noted for its potential in biotechnology, particularly in the field of enzyme production. The bacterium is capable of producing various extracellular enzymes that can break down polysaccharides and proteins, which could be harnessed for industrial applications, including waste treatment and biofuel production. The exploration of these enzymatic pathways could lead to advancements in sustainable practices and the development of novel bioprocesses. Overall, Flavobacterium kayseriense stands out not only for its ecological significance but also for its potential contributions to environmental science and biotechnology, making it a valuable organism for ongoing research.

Taxonomy

Superkingdom: Bacteria

Phylum: Bacteroidota

Class: Flavobacteriia

Order: Flavobacteriales

Family: Flavobacteriaceae

Genus: Flavobacterium

Species: Flavobacterium kayseriense

NCBI ID

2764714

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/305/095/GCA_014305095.1_ASM1430509v1

File for sequence-based predictions:
GCA_014305095.1_ASM1430509v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The bacterium Flavobacterium kayseriense is a member of the Flavobacteriaceae family and has been identified in various environmental and clinical settings. While it is not commonly associated with human disease, its presence in clinical specimens raises important considerations regarding its potential role in infections and pathogenicity. Clinical relevance is primarily noted in immunocompromised patients, where opportunistic infections may occur. The organism has been isolated from cases of bacteremia and wound infections, indicating that it can act as a secondary pathogen in individuals with weakened immune systems. In terms of antimicrobial resistance, F. kayseriense has shown varying susceptibility patterns to common antibiotics, which necessitates careful consideration in treatment protocols. The organism's ability to form biofilms may contribute to its persistence in clinical settings and complicate treatment efforts. Furthermore, the role of F. kayseriense in the human microbiome is still under investigation, and its potential as a probiotic or in therapeutic applications remains largely unexplored. Understanding its interactions with the human body, including any immune evasion strategies, is crucial for assessing its overall impact on human health. As research continues, the clinical implications of Flavobacterium kayseriense may become clearer, particularly in the context of emerging infections and the management of antibiotic resistance.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Flavobacterium kayseriense is a species of bacterium that is primarily associated with freshwater environments and marine ecosystems. This microorganism thrives in nutrient-rich waters, often found in sediments and biofilms where organic matter is abundant. Its ecological niche is characterized by its ability to degrade complex organic compounds, playing a crucial role in the carbon cycle and nutrient recycling within these habitats. In freshwater biomes, Flavobacterium kayseriense is commonly found in lakes, rivers, and streams, where it contributes to the breakdown of organic materials, thus supporting the overall health of the aquatic ecosystem. Its presence is often indicative of a balanced ecosystem, as it helps maintain water quality by decomposing organic waste. In marine environments, this bacterium can be found in coastal waters and estuaries, where it interacts with various microorganisms and contributes to the microbial loop. This process is essential for nutrient cycling, as it facilitates the transfer of energy from primary producers to higher trophic levels. Moreover, Flavobacterium kayseriense exhibits notable symbiotic relationships with other microorganisms, enhancing the degradation of organic matter and promoting biodiversity within its habitat. Its adaptability to varying salinity and nutrient levels allows it to thrive in diverse environments, making it a key player in both freshwater and marine biomes.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The bacterium Flavobacterium kayseriense has shown potential in various industrial applications, particularly in the fields of biotechnology and waste management. This microorganism is known for its ability to degrade complex organic compounds, making it a candidate for biodegradation processes in contaminated environments. Its enzymatic activity allows it to break down pollutants, which can be harnessed in waste treatment facilities to improve the efficiency of waste degradation and reduce environmental impact. In the realm of biofuel production, Flavobacterium kayseriense may contribute to the conversion of biomass into biofuels through fermentation processes. By utilizing its metabolic pathways, this organism can potentially enhance the yield of biofuels from organic waste materials, thus promoting sustainable energy solutions. Moreover, the unique metabolic capabilities of Flavobacterium kayseriense could be explored in pharmaceutical development. Its ability to produce specific enzymes may lead to the discovery of novel compounds that can be used in drug formulation or as biocatalysts in pharmaceutical synthesis. Overall, the diverse applications of Flavobacterium kayseriense highlight its significance in advancing industrial biotechnology and environmental sustainability.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 8

LLM predicted phenotypes: 5

Phenotype	High-quality annotation	google/gemini-pro-1.5	anthropic/claude-3.5-sonnet	anthropic/claude-3-haiku:beta	meta-llama/llama-3-70b-instruct:nitro	meta-llama/llama-3-8b-instruct:nitro	google/gemini-flash-1.5	perplexity/llama-3-sonar-small-32k-chat	google/gemma-7b-it	openchat/openchat-7b	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	openai/gpt-4o	openai/gpt-4o	openai/gpt-4	openai/gpt-4	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	mistralai/mixtral-8x7b-instruct:nitro	mistralai/mixtral-8x7b-instruct:nitro	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct	mistralai/mistral-7b-instruct	mistralai/mistral-7b-instruct	google/gemini-pro	google/gemini-pro
Motility	FALSE	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗
Gram staining	gram stain negative	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓
Aerophilicity	aerobic	aerobic ✓	aerobic ✓	N/A	aerobic ✓	N/A	N/A	N/A	N/A	N/A	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	N/A	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	N/A	N/A	N/A
Extreme environment tolerance	TRUE	false ✗	false ✗	true ✓	false ✗	true ✓	false ✗	false ✗	true ✓	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	true ✓	true ✓	false ✗	false ✗	false ✗	false ✗
Biofilm formation	N/A	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Animal pathogenicity	N/A	true	false	true	false	false	true	false	true	false	false	false	false	false	false	false	true	true	false	false	false	false	false	false	false	false	false	false
Biosafety level	biosafety level 1	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓
Health association	N/A	true	false	true	true	true	true	true	true	true	false	false	true	true	true	true	true	true	true	true	false	false	false	false	false	false	false	false
Host association	N/A	true	false	true	true	true	true	true	false	true	false	false	false	false	false	false	true	true	true	true	false	false	false	false	true	true	false	false
Plant pathogenicity	FALSE	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	N/A	N/A	N/A	alpha	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	bacillus	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	coccus ✗	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	N/A	N/A	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓

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