Pseudomonas gozinkensis

General Information

Pseudomonas gozinkensis is a fascinating microorganism that belongs to the genus Pseudomonas, which is known for its metabolic diversity and environmental versatility. One of the most intriguing aspects of Pseudomonas gozinkensis is its ability to thrive in a variety of ecological niches, ranging from soil and water to plant surfaces. This adaptability makes it a valuable subject for studying microbial ecology and environmental microbiology. A key feature of Pseudomonas gozinkensis is its bioremediation potential. Members of the Pseudomonas genus are renowned for their ability to degrade a wide array of organic pollutants, and Pseudomonas gozinkensis is no exception. This organism can break down complex hydrocarbons and other environmental contaminants, making it a promising candidate for cleaning up polluted environments. Another notable characteristic is its production of secondary metabolites. Pseudomonas gozinkensis produces a variety of bioactive compounds, including antibiotics and siderophores, which can inhibit the growth of pathogenic microorganisms and promote plant health. This makes it an interesting subject for research in natural product discovery and agricultural biotechnology. Furthermore, Pseudomonas gozinkensis exhibits quorum sensing capabilities, a form of bacterial communication that regulates gene expression in response to population density. This phenomenon is crucial for understanding microbial behavior, biofilm formation, and the development of antimicrobial resistance. In summary, Pseudomonas gozinkensis is a versatile and ecologically significant microorganism with remarkable abilities in bioremediation, secondary metabolite production, and quorum sensing. Its diverse capabilities make it a valuable model organism for a wide range of scientific research areas.

Pseudomonas gozinkensis is a fascinating bacterium that has garnered attention due to its unique metabolic capabilities and ecological significance. This species is part of the diverse genus Pseudomonas, known for its versatility in various environments, including soil, water, and plant surfaces. One of the most interesting aspects of P. gozinkensis is its ability to degrade a wide range of organic compounds, making it a potential candidate for bioremediation applications. This characteristic is particularly valuable in the context of environmental cleanup, as it can help in the breakdown of pollutants such as hydrocarbons and other toxic substances. Another notable feature of P. gozinkensis is its production of secondary metabolites, which can have antimicrobial properties. This opens up avenues for research into natural product chemistry and the development of new antibiotics. The potential to harness these metabolites could lead to innovative treatments in the face of rising antibiotic resistance. Furthermore, P. gozinkensis has been studied for its interactions with plant roots, suggesting a role in promoting plant growth and health. This symbiotic relationship highlights its importance in agriculture and ecosystem dynamics. Understanding these interactions can lead to advancements in sustainable farming practices and crop management. Overall, Pseudomonas gozinkensis stands out not only for its ecological roles but also for its potential applications in biotechnology and environmental science, making it a valuable subject for ongoing research.

Taxonomy

Superkingdom: Bacteria

Phylum: Pseudomonadota

Class: Gammaproteobacteria

Order: Pseudomonadales

Family: Pseudomonadaceae

Genus: Pseudomonas

Species: Pseudomonas gozinkensis

NCBI ID

2774461

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCA/014/863/585/GCA_014863585.1_ASM1486358v1

File for sequence-based predictions:
GCA_014863585.1_ASM1486358v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The organism Pseudomonas gozinkensis is a member of the Pseudomonas genus, which is known for its clinical significance, particularly in immunocompromised patients. This bacterium has been associated with various infections, including respiratory tract infections, urinary tract infections, and wound infections. Pathogenicity is a key feature of Pseudomonas gozinkensis, as it can produce a range of virulence factors, including biofilm formation, which enhances its ability to adhere to surfaces and evade the immune response of the host. One of the major concerns regarding Pseudomonas gozinkensis is its potential for antimicrobial resistance. Like other Pseudomonas species, it may exhibit resistance to multiple classes of antibiotics, complicating treatment options for infections. This resistance is often attributed to mechanisms such as the production of beta-lactamases, efflux pumps, and alterations in membrane permeability, which can lead to treatment failures. In terms of human health, Pseudomonas gozinkensis may play a role in the microbiome, although its specific contributions are not well-documented. However, its presence in clinical settings raises concerns about its potential to cause outbreaks, particularly in healthcare environments where patients are at higher risk for infections. Overall, while Pseudomonas gozinkensis is not as widely studied as other Pseudomonas species, its implications in pathogenicity, antimicrobial resistance, and potential involvement in infections warrant further investigation to better understand its role in human health and disease.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Pseudomonas gozinkensis is a versatile bacterium commonly found in various habitat types that include soil, water, and plant surfaces. This microorganism thrives in environments that are rich in organic matter, often associated with decaying plant material and nutrient-rich substrates. Its adaptability allows it to occupy a range of ecological niches, making it a significant player in the microbial community of these biomes. In soil ecosystems, Pseudomonas gozinkensis contributes to the decomposition of organic matter, facilitating nutrient cycling and enhancing soil fertility. It plays a crucial role in the breakdown of complex organic compounds, which helps in the release of essential nutrients for plant uptake. This bacterium is also known for its ability to promote plant growth through mechanisms such as nitrogen fixation and phosphate solubilization, establishing a beneficial relationship with various plant species. In aquatic environments, Pseudomonas gozinkensis can be found in both freshwater and marine ecosystems. It participates in the degradation of pollutants, including hydrocarbons, thus playing a vital role in bioremediation processes. Its metabolic versatility allows it to utilize a wide range of substrates, making it an important organism for maintaining the health of aquatic habitats. Additionally, Pseudomonas gozinkensis is often associated with phytopathogenic interactions, where it can act as a biocontrol agent against certain plant pathogens. This symbiotic relationship not only aids in plant health but also contributes to the overall biodiversity and stability of the ecosystems it inhabits. Its ability to adapt to various environmental conditions underscores its ecological significance and potential applications in sustainable agriculture and environmental management.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Pseudomonas gozinkensis has shown significant potential in various industrial applications due to its versatile metabolic capabilities. One of the primary areas of interest is in biotechnology, where Pseudomonas gozinkensis is utilized in biodegradation processes. This organism can effectively break down complex organic pollutants, making it valuable in waste management and environmental remediation efforts. For instance, it has been documented to degrade hydrocarbons, which is crucial for cleaning up oil spills and other petroleum-related contaminants. In the realm of biofuel production, Pseudomonas gozinkensis can be involved in the fermentation of organic materials, converting waste into usable biofuels. Its ability to metabolize various substrates allows for the efficient conversion of biomass into bioethanol or biogas, contributing to sustainable energy solutions. Furthermore, this microorganism has potential applications in pharmaceutical development. Its enzymatic activities can be harnessed for the production of valuable compounds, including antibiotics and other bioactive molecules. The ability of Pseudomonas gozinkensis to produce specific enzymes can facilitate enzyme production processes that are essential in the pharmaceutical industry. Overall, the diverse capabilities of Pseudomonas gozinkensis in fermentation, biodegradation, and enzyme production highlight its importance across multiple industries, making it a promising candidate for future research and application.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 11

LLM predicted phenotypes: 2

Phenotype	High-quality annotation	anthropic/claude-3.5-sonnet	google/gemini-pro-1.5	anthropic/claude-3-haiku:beta	google/gemini-flash-1.5	perplexity/llama-3-sonar-small-32k-chat	meta-llama/llama-3-70b-instruct:nitro	google/gemma-7b-it	openchat/openchat-7b	mistralai/mixtral-8x7b-instruct:nitro	google/gemini-pro	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	openai/gpt-4o	openai/gpt-4o	openai/gpt-4	openai/gpt-4	meta-llama/llama-3-8b-instruct:nitro	meta-llama/llama-3-8b-instruct:nitro	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	mistralai/mistral-7b-instruct	mistralai/mistral-7b-instruct
Motility	TRUE	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓
Gram staining	gram stain negative	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓
Aerophilicity	aerobic	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	false ✓	false ✓	true ✗	false ✓	true ✗	true ✗	true ✗	false ✓	true ✗	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗
Biofilm formation	N/A	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Animal pathogenicity	TRUE	false ✗	false ✗	true ✓	true ✓	true ✓	false ✗	true ✓	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	true ✓	true ✓	false ✗	false ✗	false ✗	false ✗	true ✓	true ✓	false ✗	false ✗
Biosafety level	biosafety level 1	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓
Health association	N/A	true	true	true	true	true	true	true	false	true	false	false	false	true	true	false	false	true	true	false	false	false	false	true	true	false	false
Host association	FALSE	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗
Plant pathogenicity	FALSE	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	gamma	N/A	N/A	alpha ✗	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	bacillus	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓

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