Alteromonas macleodii

General Information

Alteromonas macleodii is a marine bacterium that has garnered significant interest due to its adaptability to various marine environments and its role in the biogeochemical cycling of nutrients. This organism is particularly notable for its ability to thrive in both coastal and open ocean waters, demonstrating a remarkable ecological versatility. One of the most intriguing aspects of A. macleodii is its genomic diversity. Different strains of this species have been found to possess a wide array of genes that enable them to exploit various ecological niches. This genetic variability is a key factor in their ability to adapt to different environmental conditions, such as changes in nutrient availability and temperature. Moreover, A. macleodii is known for its production of extracellular enzymes that play a crucial role in the degradation of organic matter in marine ecosystems. These enzymes include proteases, lipases, and amylases, which help in breaking down complex organic compounds into simpler molecules that can be utilized by other marine organisms. This makes A. macleodii an important player in the marine food web and nutrient cycling. Another fascinating feature of A. macleodii is its interaction with marine phytoplankton. It has been observed to form symbiotic relationships with various phytoplankton species, aiding in their growth and health. This interaction is particularly important in the context of marine primary production, as phytoplankton are the foundation of the oceanic food chain. In addition to its ecological roles, A. macleodii has potential applications in biotechnology. Its ability to produce a variety of enzymes and bioactive compounds makes it a candidate for industrial processes, such as the production of biofuels and bioremediation of polluted marine environments. Overall, Alteromonas macleodii is a highly adaptable and ecologically significant marine bacterium with a wide range of potential applications in environmental and industrial biotechnology. Its genomic diversity and enzymatic capabilities make it a valuable subject for ongoing research in marine microbiology and biotechnology.

Alteromonas macleodii is a fascinating marine bacterium that plays a significant role in oceanic ecosystems. This organism is particularly notable for its ability to thrive in nutrient-rich environments, often found in coastal waters and estuaries. One of the most interesting aspects of A. macleodii is its capacity for biodegradation, which allows it to break down complex organic compounds, making it valuable for bioremediation efforts in polluted marine environments. Additionally, A. macleodii is known for its production of exopolysaccharides, which can contribute to the formation of marine aggregates and influence nutrient cycling in the ocean. This characteristic not only aids in the organism's survival but also plays a crucial role in the overall health of marine ecosystems. From a research perspective, A. macleodii has garnered attention for its potential applications in biotechnology, particularly in the fields of biotechnology and environmental science. Its unique metabolic pathways and ability to utilize a wide range of substrates make it a model organism for studying microbial ecology and the dynamics of nutrient cycling in marine environments. Furthermore, the genomic analysis of A. macleodii has revealed insights into its evolutionary adaptations to marine life, including genes associated with stress responses and nutrient acquisition. This makes it a valuable subject for studies aimed at understanding microbial diversity and adaptation in changing oceanic conditions. Overall, Alteromonas macleodii stands out as a key player in marine microbiology, with implications for both ecological research and practical applications in environmental management.

Taxonomy

Superkingdom: Bacteria

Phylum: Pseudomonadota

Class: Gammaproteobacteria

Order: Alteromonadales

Family: Alteromonadaceae

Genus: Alteromonas

Species: Alteromonas macleodii

NCBI ID

28108

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCF/002/849/875/GCF_002849875.1_ASM284987v1

File for sequence-based predictions:
GCF_002849875.1_ASM284987v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The bacterium Alteromonas macleodii is primarily known for its role in marine environments, but it has garnered attention for its potential clinical implications. While it is not a common human pathogen, it has been isolated from various clinical specimens, suggesting a possible association with infections in immunocompromised individuals. Clinical relevance arises from its ability to produce bioactive compounds, which may have therapeutic applications, including antimicrobial properties. However, the exact mechanisms of its pathogenicity remain poorly understood, and further research is needed to clarify its role in human health and disease. Additionally, there are concerns regarding its potential antimicrobial resistance mechanisms, particularly in the context of environmental reservoirs contributing to resistance genes. Overall, while Alteromonas macleodii is not a primary focus in clinical microbiology, its interactions with human health and disease warrant further investigation.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Alteromonas macleodii is a marine bacterium commonly found in coastal and open ocean environments. This microorganism thrives in nutrient-rich waters, often associated with areas of high productivity such as upwelling zones and estuaries. Its presence is particularly notable in regions where organic matter is abundant, as it plays a crucial role in the degradation of organic materials, contributing to nutrient cycling within the ecosystem. In these marine biomes, A. macleodii exhibits important interactions with other microorganisms, forming part of the microbial loop that supports higher trophic levels. It is known to engage in symbiotic relationships with phytoplankton, enhancing their growth by providing essential nutrients through its metabolic processes. Furthermore, Alteromonas macleodii demonstrates remarkable environmental adaptability, being able to thrive in varying salinities and temperatures, which allows it to occupy diverse niches within the marine ecosystem. Its ability to utilize a wide range of organic compounds makes it a key player in the biogeochemical cycles of carbon and nitrogen, thus influencing the overall health and productivity of marine habitats. Overall, A. macleodii is a vital component of the marine biome, contributing to ecological balance and supporting the intricate web of life in oceanic environments.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Alteromonas macleodii has shown significant potential in various industrial applications across multiple sectors. One of the most notable areas is in biotechnology, where Alteromonas macleodii is utilized for its ability to produce a range of enzymes that can be harnessed in biocatalysis processes. These enzymes are particularly valuable in the food industry for fermentation processes, enhancing flavor and texture in products such as dairy and fermented beverages. In the realm of waste management, Alteromonas macleodii has demonstrated capabilities in biodegradation, particularly in the breakdown of complex organic materials and pollutants in marine environments. This makes it a candidate for bioremediation efforts aimed at cleaning up oil spills and other environmental contaminants, showcasing its role in sustainable waste treatment solutions. Furthermore, Alteromonas macleodii has been explored for its potential in biofuel production. Its metabolic pathways can be leveraged to convert organic substrates into biofuels through fermentation processes, contributing to renewable energy sources and reducing reliance on fossil fuels. In pharmaceutical development, the unique metabolites produced by Alteromonas macleodii have been investigated for their antimicrobial and anti-inflammatory properties, indicating potential applications in drug formulation and development. The organism's ability to thrive in extreme marine environments also suggests that it may produce novel compounds that could lead to the discovery of new pharmaceuticals. Overall, Alteromonas macleodii represents a versatile microorganism with diverse applications in biotechnology, waste management, biofuel production, and pharmaceutical development, making it a valuable asset in various industrial sectors.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 9

LLM predicted phenotypes: 4

Phenotype	High-quality annotation	google/gemini-pro-1.5	anthropic/claude-3.5-sonnet	google/gemini-flash-1.5	google/gemma-7b-it	meta-llama/llama-3-8b-instruct:nitro	anthropic/claude-3-haiku:beta	perplexity/llama-3-sonar-small-32k-chat	meta-llama/llama-3-70b-instruct:nitro	google/gemini-pro	openai/gpt-4	openai/gpt-4	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	openai/gpt-4o	openai/gpt-4o	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	openchat/openchat-7b	openchat/openchat-7b	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct	mistralai/mixtral-8x7b-instruct:nitro	mistralai/mixtral-8x7b-instruct:nitro	mistralai/mistral-7b-instruct	mistralai/mistral-7b-instruct
Motility	TRUE	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓	true ✓	true ✓
Gram staining	gram stain negative	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain positive ✗	N/A	gram stain negative ✓	N/A	gram stain negative ✓
Aerophilicity	aerobic	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A	N/A	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗
Biofilm formation	N/A	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Animal pathogenicity	N/A	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false
Biosafety level	biosafety level 1	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓
Health association	N/A	true	false	true	true	true	true	true	true	true	true	true	true	true	false	false	false	false	true	true	true	true	false	false	true	true	false	false
Host association	FALSE	false ✓	false ✓	true ✗	false ✓	true ✗	false ✓	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	N/A	N/A	N/A	gamma	alpha	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	bacillus	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	coccus ✗	coccus ✗	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓

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