Pseudomonas schmalbachii

General Information

Pseudomonas schmalbachii is a fascinating microorganism within the genus Pseudomonas, known for its diverse metabolic capabilities and environmental versatility. One of the most intriguing aspects of Pseudomonas schmalbachii is its ability to thrive in a variety of ecological niches, ranging from soil and water environments to plant surfaces. This adaptability is largely due to its extensive genetic repertoire, which allows it to metabolize a wide array of organic compounds. Another noteworthy characteristic of Pseudomonas schmalbachii is its potential for bioremediation. The species has been studied for its ability to degrade environmental pollutants, including hydrocarbons and various toxic chemicals. This makes it a valuable candidate for cleaning up contaminated sites and mitigating environmental pollution. From a research perspective, Pseudomonas schmalbachii is also of interest due to its interactions with plants. It has been observed to promote plant growth by producing phytohormones and solubilizing phosphate, which enhances nutrient availability to plants. This plant-microbe interaction is a key area of study for developing sustainable agricultural practices. In addition, Pseudomonas schmalbachii exhibits a high degree of genetic plasticity, which allows it to adapt rapidly to changing environmental conditions. This genetic flexibility is a subject of ongoing research, as it provides insights into microbial evolution and the mechanisms underlying microbial resilience. Overall, Pseudomonas schmalbachii is a microorganism of significant interest due to its metabolic diversity, environmental adaptability, and potential applications in bioremediation and agriculture. Its study not only advances our understanding of microbial ecology but also offers practical solutions for environmental and agricultural challenges.

Pseudomonas schmalbachii is a fascinating bacterium that belongs to the genus Pseudomonas, known for its metabolic versatility and ecological significance. This species is particularly interesting due to its ability to thrive in diverse environments, including soil, water, and even in association with plants. One of the standout features of Pseudomonas schmalbachii is its potential for bioremediation, as it can degrade various pollutants, including hydrocarbons and other organic compounds, making it a valuable organism in environmental cleanup efforts. Additionally, Pseudomonas schmalbachii has been studied for its antimicrobial properties, which may contribute to its competitive advantage in natural ecosystems. The production of secondary metabolites, such as phenazines, has been linked to its ability to inhibit the growth of other microorganisms, showcasing its role in microbial interactions. Furthermore, this species is of interest in the field of plant-microbe interactions. It has been observed to promote plant growth through mechanisms such as nutrient solubilization and the production of plant growth-promoting substances. This characteristic makes Pseudomonas schmalbachii a candidate for use in sustainable agriculture practices. In summary, Pseudomonas schmalbachii stands out due to its bioremediation potential, antimicrobial activity, and beneficial interactions with plants, making it a subject of ongoing research in microbiology and environmental science.

Taxonomy

Superkingdom: Bacteria

Phylum: Pseudomonadota

Class: Gammaproteobacteria

Order: Pseudomonadales

Family: Pseudomonadaceae

Genus: Pseudomonas

Species: Pseudomonas schmalbachii

NCBI ID

2816993

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCA/017/589/465/GCA_017589465.1_ASM1758946v1

File for sequence-based predictions:
GCA_017589465.1_ASM1758946v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The organism Pseudomonas schmalbachii is a member of the Pseudomonas genus, which is known for its clinical significance, particularly in immunocompromised patients. This bacterium has been associated with various infections, including respiratory tract infections, urinary tract infections, and wound infections. Its pathogenicity is attributed to its ability to form biofilms and produce a range of virulence factors, which enhance its survival in hostile environments and contribute to its immune evasion strategies. One of the notable features of Pseudomonas schmalbachii is its antimicrobial resistance. Like many Pseudomonas species, it can exhibit resistance to multiple classes of antibiotics, making treatment challenging. This resistance is often due to the presence of efflux pumps, enzymatic degradation of antibiotics, and alterations in target sites. The emergence of resistant strains poses a significant threat in clinical settings, particularly in patients with underlying health conditions. In terms of medical applications, while Pseudomonas schmalbachii itself is not typically used in probiotics or vaccines, understanding its mechanisms of pathogenicity and resistance can inform the development of new therapeutic strategies. Research into this organism may also contribute to the broader understanding of Pseudomonas species in clinical microbiology, particularly in the context of nosocomial infections and outbreaks. Overall, Pseudomonas schmalbachii serves as a reminder of the complexities involved in managing infections caused by opportunistic pathogens, especially in vulnerable populations.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Pseudomonas schmalbachii has shown significant potential in various industrial applications. One of the primary areas of interest is in biotechnology, where Pseudomonas schmalbachii is utilized for its ability to perform biodegradation of environmental pollutants. This capability makes it a valuable asset in waste management, particularly in the treatment of contaminated soils and water, where it can break down harmful compounds such as hydrocarbons and heavy metals. In the realm of biofuel production, Pseudomonas schmalbachii can be involved in the fermentation processes that convert organic materials into biofuels. Its metabolic pathways allow for the efficient conversion of biomass into bioethanol or biodiesel, contributing to sustainable energy solutions. Furthermore, this microorganism has potential applications in pharmaceutical development. It is known to produce various enzymes that can be harnessed for drug synthesis or as biocatalysts in pharmaceutical processes. The enzymatic activity of Pseudomonas schmalbachii can facilitate the production of complex organic molecules, enhancing the efficiency of drug manufacturing. Overall, Pseudomonas schmalbachii stands out as a versatile microorganism with promising applications in biotechnology, waste management, biofuel production, and pharmaceutical development, showcasing its importance in advancing industrial processes and environmental sustainability.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 8

LLM predicted phenotypes: 5

Phenotype	High-quality annotation	anthropic/claude-3.5-sonnet	google/palm-2-chat-bison-32k	google/gemini-flash-1.5	perplexity/llama-3-sonar-small-32k-chat	meta-llama/llama-3-70b-instruct:nitro	google/gemma-7b-it	openchat/openchat-7b	microsoft/phi-3-mini-128k-instruct	mistralai/mistral-7b-instruct	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	openai/gpt-4o	openai/gpt-4o	google/gemini-pro-1.5	google/gemini-pro-1.5	openai/gpt-4	openai/gpt-4	anthropic/claude-3-haiku:beta	anthropic/claude-3-haiku:beta	mistralai/mixtral-8x7b-instruct:nitro	mistralai/mixtral-8x7b-instruct:nitro	meta-llama/llama-3-8b-instruct:nitro	meta-llama/llama-3-8b-instruct:nitro	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	google/gemini-pro	google/gemini-pro
Motility	TRUE	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓
Gram staining	gram stain negative	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓
Aerophilicity	aerobic	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓
Biofilm formation	N/A	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Animal pathogenicity	N/A	false	false	true	true	false	true	false	false	false	false	false	false	false	false	false	false	false	true	true	false	false	true	true	true	true	true	true
Biosafety level	biosafety level 1	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗
Health association	N/A	true	true	true	true	true	true	false	false	false	false	false	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Host association	FALSE	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓
Spore formation	FALSE	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	beta	beta	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	N/A	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus

Back to Search