Bacillus arachidis

General Information

Bacillus arachidis is a bacterium that has garnered interest due to its unique ecological niche and potential applications in biotechnology. This microorganism was originally isolated from the rhizosphere of peanut plants (Arachis hypogaea), which suggests a possible role in plant-microbe interactions. One of the key characteristics of Bacillus arachidis is its ability to produce a variety of enzymes that can degrade complex organic materials. This makes it a candidate for applications in bioremediation and agricultural biotechnology. Additionally, Bacillus arachidis has been noted for its production of antimicrobial compounds, which could be harnessed for biocontrol purposes to protect crops from pathogenic microorganisms. The bacterium's ability to thrive in the rhizosphere also indicates that it may play a role in promoting plant growth, possibly through mechanisms such as nitrogen fixation or phosphate solubilization, although these specific activities require further research to confirm. From a research perspective, the study of Bacillus arachidis can provide insights into the complex interactions between soil bacteria and plant roots, contributing to our understanding of soil health and plant productivity. Its enzymatic profile and antimicrobial properties make it a valuable subject for exploring new biotechnological applications. Overall, Bacillus arachidis represents a promising organism for both fundamental research and practical applications in sustainable agriculture and environmental management.

Bacillus arachidis is a fascinating bacterium primarily known for its association with the peanut plant (Arachis hypogaea). This organism is particularly interesting due to its ability to produce a variety of enzymes, including proteases and amylases, which can be beneficial in agricultural applications. These enzymes play a crucial role in the breakdown of organic matter, enhancing soil fertility and promoting plant growth. One of the unique aspects of B. arachidis is its potential in biocontrol. It has been studied for its ability to suppress certain plant pathogens, making it a valuable candidate for sustainable agriculture practices. The use of B. arachidis in biocontrol strategies could reduce the reliance on chemical pesticides, aligning with the growing demand for environmentally friendly farming methods. Additionally, Bacillus arachidis is notable for its ability to produce antimicrobial compounds. This characteristic opens up avenues for research into natural preservatives and the development of new antibiotics. The exploration of these antimicrobial properties could lead to significant advancements in food safety and public health. Overall, Bacillus arachidis stands out not only for its ecological role in peanut cultivation but also for its potential applications in agriculture and medicine, making it a subject of ongoing research interest.

Taxonomy

Superkingdom: Bacteria

Phylum: Bacillota

Class: Bacilli

Order: Bacillales

Family: Bacillaceae

Genus: Bacillus

Species: Bacillus arachidis

NCBI ID

2819290

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCF/030/285/945/GCF_030285945.1_ASM3028594v1

File for sequence-based predictions:
GCF_030285945.1_ASM3028594v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The microorganism Bacillus arachidis is primarily known for its role in the fermentation of peanuts and is associated with the production of certain food products. While it is not typically recognized as a human pathogen, its clinical implications can be significant in specific contexts. Foodborne illnesses can arise from the consumption of contaminated food products, where Bacillus arachidis may contribute to spoilage or the production of toxins. This organism is part of the broader group of Bacillus species, some of which are known for their pathogenic potential, such as Bacillus cereus, which can cause gastroenteritis and emetic syndrome. In terms of antimicrobial resistance, Bacillus arachidis may exhibit some resistance mechanisms common to the Bacillus genus, although specific studies on this organism are limited. Understanding its resistance patterns is crucial for food safety and public health, especially in regions where peanuts are a dietary staple. Moreover, Bacillus arachidis has potential applications in biotechnology, particularly in the development of probiotics and fermented foods. Its role in fermentation processes can enhance the nutritional profile of food products and may contribute to gut health, although more research is needed to establish its efficacy as a probiotic. Overall, while Bacillus arachidis is not a primary pathogen, its implications in food safety, potential for toxin production, and role in fermentation highlight its relevance in clinical and public health contexts.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Bacillus arachidis is a bacterium primarily associated with the soil biome, particularly in regions where Arachis hypogaea (peanut plants) are cultivated. This microorganism thrives in the rhizosphere, the zone of soil surrounding plant roots, where it plays a crucial role in promoting plant health and growth through various mechanisms such as nutrient cycling and disease suppression. In its natural habitat, Bacillus arachidis exhibits beneficial interactions with peanut plants, enhancing their resistance to pathogens and improving nutrient uptake. This bacterium is known for its ability to produce antibiotic compounds that inhibit the growth of harmful microorganisms, thus contributing to the overall health of the agricultural ecosystem. Additionally, Bacillus arachidis can adapt to varying soil conditions, including changes in moisture and nutrient availability, making it a resilient inhabitant of the agricultural soils where peanuts are grown. Its presence is often linked to improved soil structure and fertility, highlighting its importance in sustainable farming practices. Overall, Bacillus arachidis exemplifies the intricate relationships within the soil ecosystem, showcasing its role as a beneficial microorganism that supports both plant health and soil quality.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Bacillus arachidis has shown significant potential in various industrial applications. One of the primary areas of interest is in biotechnology, where Bacillus arachidis is utilized for its ability to produce enzymes that can be harnessed in biocatalysis processes. These enzymes are particularly valuable in the food industry for applications such as improving the texture and flavor of products through fermentation processes. In the realm of waste management, Bacillus arachidis has demonstrated capabilities in biodegradation, where it can break down complex organic materials, thus aiding in the treatment of waste and reducing environmental pollution. This property is particularly useful in composting and the treatment of agricultural waste, contributing to sustainable waste management practices. Furthermore, the potential of Bacillus arachidis in biofuel production is noteworthy. The organism can be involved in fermentation processes that convert biomass into biofuels, such as ethanol, thereby supporting the development of renewable energy sources. In pharmaceutical development, Bacillus arachidis has been explored for its ability to produce bioactive compounds that may have therapeutic properties. This includes the production of antibiotics and other medicinal compounds through fermentation processes, which can be crucial in the development of new drugs. Overall, Bacillus arachidis presents a versatile profile with applications spanning biotechnology, waste management, biofuel production, and pharmaceutical development, making it a valuable organism in various industrial sectors.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 10

LLM predicted phenotypes: 3

Phenotype	High-quality annotation	google/gemini-pro-1.5	google/gemini-flash-1.5	anthropic/claude-3-haiku:beta	anthropic/claude-3.5-sonnet	google/palm-2-chat-bison-32k	meta-llama/llama-3-70b-instruct:nitro	perplexity/llama-3-sonar-small-32k-chat	google/gemma-7b-it	openchat/openchat-7b	microsoft/phi-3-mini-128k-instruct	mistralai/mixtral-8x7b-instruct:nitro	mistralai/mistral-7b-instruct	google/gemini-pro	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	openai/gpt-4o	openai/gpt-4o	meta-llama/llama-3-8b-instruct:nitro	meta-llama/llama-3-8b-instruct:nitro	openai/gpt-4	openai/gpt-4	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b
Motility	FALSE	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗
Gram staining	gram stain positive	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain negative ✗	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓
Aerophilicity	aerobic	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	false ✓	false ✓	true ✗	true ✗	false ✓	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗
Biofilm formation	N/A	true	true	true	true	true	true	true	true	true	true	true	false	true	true	true	true	true	true	true	false	false	true	true
Animal pathogenicity	TRUE	false ✗	false ✗	true ✓	false ✗	false ✗	false ✗	true ✓	true ✓	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗
Biosafety level	biosafety level 1	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓
Health association	N/A	true	false	true	true	true	true	true	true	false	false	true	false	true	false	false	false	false	true	true	false	false	false	false
Host association	TRUE	false ✗	false ✗	true ✓	false ✗	false ✗	false ✗	true ✓	false ✗	false ✗	true ✓	true ✓	false ✗	true ✓	false ✗	false ✗	false ✗	false ✗	true ✓	true ✓	false ✗	false ✗	false ✗	false ✗
Plant pathogenicity	FALSE	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗
Spore formation	TRUE	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	false ✗	true ✓	false ✗	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓
Hemolysis	N/A	N/A	gamma	beta	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	bacillus	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓

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