Streptomyces liliiviolaceus

General Information

Streptomyces liliiviolaceus is a fascinating microorganism belonging to the genus Streptomyces, which is renowned for its prolific production of secondary metabolites. One of the most noteworthy characteristics of S. liliiviolaceus is its ability to produce a variety of bioactive compounds, including antibiotics, antifungals, and antitumor agents. This makes it a valuable organism in the field of biotechnology and pharmaceutical research. The genus Streptomyces is well-known for its complex life cycle and the formation of mycelium, which is a network of filamentous cells. S. liliiviolaceus is no exception and exhibits a similar morphological complexity, which is often studied to understand the differentiation processes in bacteria. Another unique feature of S. liliiviolaceus is its pigmentation. The species name 'liliiviolaceus' hints at its ability to produce a distinctive lilac or violet pigment, which can be of interest for natural dye production and other industrial applications. From a research perspective, S. liliiviolaceus is also valuable for its genetic diversity. The genome of Streptomyces species is typically large and rich in genes responsible for the biosynthesis of secondary metabolites. This genetic wealth provides a treasure trove for scientists looking to discover new drugs and understand the genetic basis of metabolite production. In summary, Streptomyces liliiviolaceus stands out due to its bioactive compound production, morphological complexity, distinctive pigmentation, and genetic richness, making it a highly interesting and valuable organism for scientific research and industrial applications.

Streptomyces liliiviolaceus is a fascinating actinobacterium known for its unique ability to produce a variety of bioactive compounds, particularly pigments that contribute to its distinctive violet coloration. This organism is part of the larger genus Streptomyces, which is renowned for its prolific production of antibiotics and other secondary metabolites. What makes S. liliiviolaceus particularly interesting is its potential applications in biotechnology and pharmaceuticals. One of the standout features of S. liliiviolaceus is its ability to synthesize compounds with antimicrobial properties, which can be valuable in the development of new antibiotics, especially in the face of rising antibiotic resistance. The pigments produced by this species, such as violacein, not only provide a striking visual characteristic but also exhibit various biological activities, including anti-cancer and anti-inflammatory effects. This dual functionality of producing both color and bioactive compounds makes S. liliiviolaceus a subject of interest for researchers exploring natural product chemistry. Additionally, S. liliiviolaceus has been studied for its role in soil health and plant growth promotion, contributing to its value in agricultural research. Its interactions with plants and other microorganisms can enhance nutrient availability and promote sustainable agricultural practices. The ecological significance of this organism, combined with its biotechnological potential, positions S. liliiviolaceus as a promising candidate for further research in both environmental and medical fields.

Taxonomy

Superkingdom: Bacteria

Phylum: Actinomycetota

Class: Actinomycetes

Order: Kitasatosporales

Family: Streptomycetaceae

Genus: Streptomyces

Species: Streptomyces liliiviolaceus

NCBI ID

2823109

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCA/018/070/025/GCA_018070025.1_ASM1807002v1

File for sequence-based predictions:
GCA_018070025.1_ASM1807002v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The organism Streptomyces liliiviolaceus is a member of the genus Streptomyces, which is known for its significant role in the production of antibiotics and other bioactive compounds. While S. liliiviolaceus itself is not commonly associated with human disease, its relatives have been implicated in various clinical contexts. Antimicrobial resistance is a critical concern, as many Streptomyces species produce natural antibiotics, but they can also harbor genes that confer resistance to these agents, complicating treatment options. In terms of human health, S. liliiviolaceus may have potential applications in the development of new therapeutics, particularly in the field of antibiotic discovery. Its ability to produce secondary metabolites could lead to the identification of novel compounds that can combat resistant bacterial strains. Furthermore, the genus Streptomyces is known for its role in soil health and nutrient cycling, which indirectly supports human health by maintaining ecosystems. However, the pathogenic potential of some Streptomyces species, particularly in immunocompromised individuals, should not be overlooked. Overall, while Streptomyces liliiviolaceus may not have direct clinical implications, its contributions to antibiotic production, potential for therapeutic applications, and the broader implications of antimicrobial resistance in the genus underscore its relevance in medical microbiology.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Streptomyces liliiviolaceus is a species of actinobacteria commonly found in soil and decaying organic matter. This microorganism thrives in a variety of terrestrial biomes, particularly in regions with rich nutrient availability, such as temperate forests and grasslands. Its ability to decompose complex organic materials allows it to play a crucial role in nutrient cycling within these ecosystems. In its natural habitat, Streptomyces liliiviolaceus contributes to the breakdown of plant debris, facilitating the release of essential nutrients back into the soil. This process not only enriches the soil but also supports the growth of other organisms, making it a vital player in maintaining soil health and biodiversity. Additionally, this microorganism is known for its production of various bioactive compounds, which can have significant ecological implications. These compounds may act as natural antibiotics, helping to suppress the growth of competing microorganisms and thus influencing the microbial community structure in its environment. This interaction highlights its role in microbial competition and ecological balance. Furthermore, Streptomyces liliiviolaceus exhibits a remarkable ability to adapt to varying environmental conditions, including changes in moisture and nutrient levels. This adaptability allows it to colonize diverse habitats, from arid soils to moist forest floors, showcasing its ecological versatility. In summary, Streptomyces liliiviolaceus is predominantly associated with soil ecosystems, where it plays a significant role in decomposition, nutrient cycling, and microbial interactions, contributing to the overall health and stability of its biome.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Streptomyces liliiviolaceus has shown significant potential in various industrial applications. One of the most notable areas is in biotechnology, where it is utilized for its ability to produce a range of bioactive compounds, including antibiotics and enzymes. This organism is particularly known for its role in fermentation, which is a critical process in the production of pharmaceuticals and other bioactive substances. In the realm of waste management, Streptomyces liliiviolaceus has demonstrated capabilities in biodegradation, where it can break down complex organic materials, thus aiding in the treatment of waste and reducing environmental pollution. Its enzymatic activity is particularly valuable in this context, as it can facilitate the breakdown of pollutants and contribute to the detoxification of contaminated environments. Moreover, this microorganism has potential applications in biofuel production. By participating in fermentation processes, it can help convert biomass into biofuels, providing a sustainable alternative to fossil fuels. The enzymes produced by Streptomyces liliiviolaceus can enhance the efficiency of biomass conversion, making it a valuable asset in the renewable energy sector. In summary, Streptomyces liliiviolaceus is a versatile microorganism with applications spanning pharmaceutical development, waste management, and biofuel production, primarily through its roles in fermentation, biodegradation, and enzyme production.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 10

LLM predicted phenotypes: 3

Phenotype	High-quality annotation	google/gemini-pro-1.5	anthropic/claude-3.5-sonnet	meta-llama/llama-3-8b-instruct:nitro	google/gemini-flash-1.5	google/gemini-flash-1.5	meta-llama/llama-3-70b-instruct:nitro	anthropic/claude-3-haiku:beta	google/gemma-7b-it	openchat/openchat-7b	mistralai/mixtral-8x7b-instruct:nitro	mistralai/mistral-7b-instruct	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	openai/gpt-4o	openai/gpt-4o	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	openai/gpt-4	openai/gpt-4	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	google/gemini-pro	google/gemini-pro	perplexity/llama-3-sonar-small-32k-chat	perplexity/llama-3-sonar-small-32k-chat	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct
Motility	FALSE	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓
Gram staining	gram stain positive	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	N/A	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain negative ✗	gram stain positive ✓	gram stain positive ✓	gram stain variable ✗	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓
Aerophilicity	aerobic	aerobic ✓	aerobic ✓	aerotolerant ✗	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	true ✗	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	true ✗	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗
Biofilm formation	N/A	true	true	true	true	true	true	true	true	true	true	false	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Animal pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Biosafety level	biosafety level 1	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 3 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗
Health association	N/A	true	true	false	false	false	false	true	true	true	true	false	false	false	true	true	true	true	true	true	true	true	true	true	true	true	false	false
Host association	FALSE	false ✓	true ✗	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	TRUE	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓
Hemolysis	N/A	N/A	N/A	N/A	gamma	gamma	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	tail	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗

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