Huaxiibacter chinensis

General Information

Huaxiibacter chinensis is a fascinating microorganism that has garnered attention due to its unique ecological niche and potential applications. This bacterium was first isolated from forest soil in China, which suggests it plays a role in soil nutrient cycling and ecosystem functioning. One of the most intriguing aspects of H. chinensis is its ability to thrive in specific environmental conditions, making it a subject of interest for studies on microbial adaptation and resilience. Genomic studies of Huaxiibacter chinensis have revealed a wealth of genetic information that could be harnessed for biotechnological applications. The genome encodes a variety of enzymes that are involved in the degradation of complex organic compounds, indicating its potential use in bioremediation processes. This capability is particularly valuable for the breakdown of pollutants in contaminated soils, offering a sustainable approach to environmental cleanup. Another noteworthy feature of H. chinensis is its production of secondary metabolites. These compounds have shown promise in preliminary studies for their antimicrobial properties, which could lead to the development of new antibiotics or antifungal agents. The exploration of these metabolites is an exciting avenue for pharmaceutical research, especially in the face of rising antibiotic resistance. In summary, Huaxiibacter chinensis stands out due to its ecological role, genetic potential for bioremediation, and the production of bioactive compounds. These characteristics make it a valuable organism for both environmental and medical research, highlighting its importance in advancing our understanding of microbial diversity and its applications.

Huaxiibacter chinensis is a fascinating bacterium that was first isolated from a freshwater environment in China. This organism belongs to the family of Flavobacteriaceae, which is known for its diverse metabolic capabilities and ecological significance. One of the most interesting aspects of Huaxiibacter chinensis is its ability to degrade complex organic compounds, making it a potential candidate for bioremediation applications. This characteristic is particularly valuable in the context of environmental cleanup, as it can help in the breakdown of pollutants in aquatic ecosystems. Additionally, Huaxiibacter chinensis has been studied for its unique enzymatic properties, which may have implications in biotechnology. The enzymes produced by this bacterium can be harnessed for various industrial processes, including the production of biofuels and bioplastics. The potential for enzyme production makes Huaxiibacter chinensis a subject of interest for researchers looking to develop sustainable alternatives to traditional materials. Furthermore, the genomic analysis of Huaxiibacter chinensis has revealed insights into its metabolic pathways, which could lead to a better understanding of microbial interactions in freshwater ecosystems. This knowledge is crucial for ecological studies and can inform conservation efforts aimed at preserving biodiversity in aquatic habitats. Overall, Huaxiibacter chinensis stands out not only for its ecological role but also for its potential applications in environmental and industrial biotechnology.

Taxonomy

Superkingdom: Bacteria

Phylum: Pseudomonadota

Class: Gammaproteobacteria

Order: Enterobacterales

Family: Enterobacteriaceae

Genus: Huaxiibacter

Species: Huaxiibacter chinensis

NCBI ID

2899785

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/171/985/GCA_022171985.1_ASM2217198v1

File for sequence-based predictions:
GCA_022171985.1_ASM2217198v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The microorganism Huaxiibacter chinensis is a recently identified bacterium that has garnered attention for its potential clinical implications. While research is still emerging, preliminary studies suggest that Huaxiibacter chinensis may play a role in the human microbiome, particularly in the gastrointestinal tract. Its presence could be associated with gut health and may influence immune responses due to its interactions with other gut microbiota. Pathogenicity has not been definitively established, but there are indications that it could be involved in certain infections or dysbiosis, particularly in individuals with compromised immune systems. The organism's ability to adapt to various environments suggests potential virulence factors that warrant further investigation. In terms of antimicrobial resistance, there is currently limited data available. However, as with many emerging bacterial species, there is a concern that Huaxiibacter chinensis could harbor resistance genes, which could complicate treatment options in the future. Moreover, the potential for Huaxiibacter chinensis to be utilized in probiotic therapies is an area of interest. If proven beneficial, it could be developed as a therapeutic agent to restore microbial balance in the gut, particularly after antibiotic treatment or in cases of gastrointestinal disorders. Overall, while the clinical relevance of Huaxiibacter chinensis is still under investigation, its interactions with the human body and potential implications for health and disease make it a noteworthy subject for future research.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Huaxiibacter chinensis is a bacterium that has been primarily isolated from freshwater environments, particularly in the context of aquatic ecosystems. This microorganism thrives in nutrient-rich waters, often found in areas with high organic matter, such as sediments and biofilms on submerged surfaces. Its presence is indicative of a healthy aquatic biome, as it plays a crucial role in the decomposition of organic materials and nutrient cycling. In these freshwater habitats, Huaxiibacter chinensis engages in symbiotic relationships with other microorganisms, contributing to the overall microbial community structure. It is known to interact with various algae and protozoa, which can enhance its survival and metabolic efficiency. This bacterium is also involved in the breakdown of pollutants, thus playing a significant role in bioremediation processes within its environment. Furthermore, Huaxiibacter chinensis exhibits remarkable environmental adaptations, allowing it to withstand fluctuations in temperature and nutrient availability. Its ability to thrive in diverse freshwater niches underscores its ecological importance, as it helps maintain the balance of microbial populations and supports the health of the aquatic ecosystem.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Huaxiibacter chinensis has shown promising potential in various industrial applications. One of the most notable areas is in biotechnology, where Huaxiibacter chinensis is utilized for its unique metabolic pathways that can be harnessed for enzyme production. These enzymes can be applied in various industries, including food processing and textile manufacturing, enhancing efficiency and reducing environmental impact. In the realm of waste management, Huaxiibacter chinensis has demonstrated capabilities in biodegradation, particularly in the breakdown of complex organic pollutants. This makes it a valuable asset in the treatment of industrial effluents and contaminated sites, contributing to cleaner environments and sustainable waste management practices. Furthermore, the organism has potential in biofuel production. Through fermentation processes, Huaxiibacter chinensis can convert biomass into bioethanol, providing a renewable energy source that can help reduce reliance on fossil fuels. This process not only aids in energy production but also contributes to the circular economy by utilizing waste materials. In pharmaceutical development, the metabolic products of Huaxiibacter chinensis may lead to the discovery of novel compounds with therapeutic properties. Research into its secondary metabolites could yield new drugs or enhance existing treatments, showcasing the organism's versatility in the pharmaceutical industry. Overall, Huaxiibacter chinensis represents a multifaceted microorganism with significant potential across various sectors, particularly in biotechnology, waste management, biofuel production, and pharmaceutical development, making it a subject of interest for further research and industrial application.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 8

LLM predicted phenotypes: 5

Phenotype	High-quality annotation	anthropic/claude-3.5-sonnet	mistralai/mistral-7b-instruct	meta-llama/llama-3-70b-instruct:nitro	anthropic/claude-3-haiku:beta	perplexity/llama-3-sonar-small-32k-chat	google/gemma-7b-it	google/gemini-pro	openai/gpt-4o	openai/gpt-4o	google/gemini-pro-1.5	google/gemini-pro-1.5	meta-llama/llama-3-8b-instruct:nitro	meta-llama/llama-3-8b-instruct:nitro	openai/gpt-4	openai/gpt-4	google/gemini-flash-1.5	google/gemini-flash-1.5	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	mistralai/mixtral-8x7b-instruct:nitro	mistralai/mixtral-8x7b-instruct:nitro	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	openchat/openchat-7b	openchat/openchat-7b	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct
Motility	TRUE	true ✓	false ✗	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	false ✗	false ✗
Gram staining	gram stain negative	gram stain negative ✓	gram stain variable ✗	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain variable ✗
Aerophilicity	aerobic	aerobic ✓	aerotolerant ✗	N/A	N/A	N/A	N/A	N/A	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerotolerant ✗	aerotolerant ✗	aerobic ✓	aerobic ✓	N/A	N/A	aerobic ✓	aerobic ✓	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	false ✓	false ✓	true ✗	true ✗	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Biofilm formation	N/A	true	false	true	true	true	true	true	true	true	false	false	true	true	false	false	true	true	true	true	true	true	true	true	true	true	false	false	false	false
Animal pathogenicity	TRUE	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗
Biosafety level	N/A	biosafety level 1	biosafety level 1	biosafety level 1	biosafety level 1	biosafety level 1	biosafety level 2	biosafety level 1	biosafety level 1	biosafety level 1	biosafety level 1	biosafety level 1	biosafety level 1	biosafety level 1	biosafety level 1	biosafety level 1	biosafety level 1	biosafety level 1	biosafety level 1	biosafety level 1	biosafety level 1	biosafety level 1	biosafety level 1	biosafety level 1	biosafety level 1	biosafety level 1	biosafety level 2	biosafety level 2	biosafety level 1	biosafety level 1
Health association	N/A	false	false	true	true	true	false	true	false	false	true	true	false	false	false	false	true	true	false	false	true	true	false	false	true	true	false	false	false	false
Host association	TRUE	false ✗	false ✗	true ✓	false ✗	true ✓	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗
Plant pathogenicity	N/A	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	gamma	gamma	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	bacillus	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	coccus ✗	coccus ✗

Back to Search