Micromonospora salmantinae

General Information

Micromonospora salmantinae is a fascinating microorganism belonging to the genus Micromonospora, which is renowned for its prolific production of bioactive compounds. This species was first isolated from soil samples, highlighting its natural habitat in terrestrial environments. One of the most intriguing aspects of M. salmantinae is its ability to produce a variety of secondary metabolites, many of which have significant pharmaceutical potential. Antibiotic Production: Micromonospora species are well-known for their role in the production of antibiotics, and M. salmantinae is no exception. The compounds produced by this microorganism have shown activity against a range of pathogenic bacteria, making it a valuable subject for research in the development of new antimicrobial agents. Enzymatic Activity: Another notable feature of M. salmantinae is its enzymatic repertoire. The organism produces a variety of enzymes that can degrade complex organic materials, which is of particular interest for industrial applications such as bioremediation and the processing of agricultural waste. Genomic Insights: The genome of M. salmantinae has been sequenced, providing a wealth of information about the genetic basis for its metabolic capabilities. This genomic data is a treasure trove for researchers looking to understand the biosynthetic pathways involved in the production of its bioactive compounds. Ecological Role: In its natural soil environment, M. salmantinae plays a crucial role in nutrient cycling and the decomposition of organic matter. Its ability to interact with plant roots also suggests potential applications in agriculture, such as promoting plant growth or protecting against soil-borne pathogens. In summary, Micromonospora salmantinae is a microorganism of significant interest due to its antibiotic production, enzymatic activity, genomic insights, and ecological role. Its diverse capabilities make it a valuable subject for ongoing research in multiple scientific and industrial fields.

Micromonospora salmantinae is a fascinating actinobacterium that has garnered attention due to its unique ecological niche and potential biotechnological applications. This microorganism is primarily isolated from soil environments, particularly in regions with rich organic matter, which suggests its role in nutrient cycling and soil health. What makes M. salmantinae particularly interesting is its ability to produce a variety of bioactive compounds, including antibiotics and enzymes, which can be valuable in pharmaceutical and agricultural industries. The organism is known for its metabolic versatility, allowing it to thrive in diverse environmental conditions. This adaptability not only contributes to its survival but also enhances its potential for bioremediation, where it can be utilized to degrade pollutants in contaminated soils. Furthermore, M. salmantinae has been studied for its antimicrobial properties, which could lead to the discovery of new therapeutic agents against resistant strains of bacteria. The genetic and biochemical pathways involved in its secondary metabolite production are of significant interest, as they may provide insights into novel drug development. In summary, Micromonospora salmantinae stands out due to its ecological importance, metabolic capabilities, and potential contributions to medicine and environmental science, making it a valuable subject for ongoing research.

Taxonomy

Superkingdom: Bacteria

Phylum: Actinomycetota

Class: Actinomycetes

Order: Micromonosporales

Family: Micromonosporaceae

Genus: Micromonospora

Species: Micromonospora salmantinae

NCBI ID

2911211

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCA/022/230/905/GCA_022230905.1_ASM2223090v1

File for sequence-based predictions:
GCA_022230905.1_ASM2223090v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The actinobacterium Micromonospora salmantinae has garnered attention due to its potential clinical implications in human health. This organism is primarily known for its role in the production of antibiotics, particularly aminoglycosides, which are crucial in treating various bacterial infections. Its ability to produce these compounds makes it a significant player in the field of pharmaceutical microbiology. In terms of pathogenicity, Micromonospora salmantinae is not typically associated with human disease; however, its close relatives within the genus have been implicated in opportunistic infections, particularly in immunocompromised individuals. This highlights the importance of understanding the ecological niche and potential pathogenicity of related species. Moreover, the organism's potential for antimicrobial resistance is an area of concern, as the overuse of antibiotics derived from such microorganisms can lead to the emergence of resistant strains. Continuous monitoring and research are essential to ensure that the therapeutic benefits of Micromonospora salmantinae are not compromised by resistance mechanisms. In summary, while Micromonospora salmantinae itself may not be a direct cause of human disease, its contributions to antibiotic production and the implications of its relatives in infections underscore its relevance in clinical microbiology and public health.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Micromonospora salmantinae is a species of actinobacteria that is primarily associated with soil ecosystems and marine environments. This microorganism thrives in nutrient-rich substrates, often found in decaying organic matter, which provides a suitable habitat for its growth and metabolic activities. Its presence is particularly noted in areas with high levels of organic decomposition, where it plays a crucial role in nutrient cycling and organic matter breakdown. Soil Biomes: In terrestrial ecosystems, Micromonospora salmantinae contributes to the soil microbiome, where it interacts with other microorganisms and plants. It is known for its ability to degrade complex organic compounds, thus facilitating the release of nutrients back into the soil. This process is vital for maintaining soil fertility and supporting plant growth. Additionally, it may engage in symbiotic relationships with certain plant species, enhancing nutrient uptake and promoting plant health. Marine Environments: In marine habitats, Micromonospora salmantinae has been isolated from sediments and biofilms associated with various substrates. Here, it contributes to the degradation of organic materials, playing a significant role in the marine carbon cycle. Its ability to produce bioactive compounds also suggests potential interactions with other marine organisms, possibly influencing microbial community dynamics and ecological balance. Overall, Micromonospora salmantinae is an important player in both terrestrial and aquatic biomes, contributing to nutrient cycling, organic matter decomposition, and maintaining ecological health through its various interactions within these environments.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Micromonospora salmantinae has shown significant potential in various industrial applications. One of the most notable areas is in biotechnology, where it is utilized for its ability to produce a range of bioactive compounds, including antibiotics. This capability is particularly valuable in the development of new pharmaceuticals, as the organism can be harnessed for fermentation processes to yield these compounds efficiently. In the realm of waste management, Micromonospora salmantinae has demonstrated effectiveness in biodegradation processes. It can break down complex organic materials, making it useful in the treatment of industrial waste and in the remediation of contaminated environments. This biodegradation ability is crucial for reducing environmental pollution and enhancing sustainability practices. Furthermore, the organism's enzymatic activity is of interest in biofuel production. By participating in fermentation processes, Micromonospora salmantinae can contribute to the conversion of biomass into biofuels, thus supporting the shift towards renewable energy sources. Its enzymes may also play a role in the breakdown of lignocellulosic materials, which is a key step in biofuel production. Overall, Micromonospora salmantinae is a versatile microorganism with applications spanning pharmaceutical development, waste management, and biofuel production, making it a valuable asset in various industrial sectors.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 8

LLM predicted phenotypes: 5

Phenotype	High-quality annotation	google/gemini-flash-1.5	meta-llama/llama-3-70b-instruct:nitro	google/gemini-pro	meta-llama/llama-3-8b-instruct:nitro	anthropic/claude-3-haiku:beta	google/gemma-7b-it	openchat/openchat-7b	mistralai/mistral-7b-instruct	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	openai/gpt-4o	openai/gpt-4o	google/gemini-pro-1.5	google/gemini-pro-1.5	anthropic/claude-3.5-sonnet	anthropic/claude-3.5-sonnet	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	openai/gpt-4	openai/gpt-4	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	perplexity/llama-3-sonar-small-32k-chat	perplexity/llama-3-sonar-small-32k-chat	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct	mistralai/mixtral-8x7b-instruct:nitro	mistralai/mixtral-8x7b-instruct:nitro
Motility	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Gram staining	gram stain positive	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain variable ✗	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain negative ✗	N/A	gram stain positive ✓
Aerophilicity	aerobic	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Biofilm formation	N/A	true	false	true	true	true	true	false	true	true	true	true	true	false	false	true	true	true	true	false	false	true	true	true	true	false	false	true	true
Animal pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Biosafety level	biosafety level 1	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓
Health association	N/A	false	true	true	true	true	false	false	false	false	false	false	false	true	true	true	true	true	true	false	false	true	true	true	true	false	false	true	true
Host association	N/A	false	true	false	true	false	false	false	true	false	false	false	false	false	false	false	false	false	false	false	false	false	false	true	true	false	false	false	false
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	TRUE	true ✓	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓
Hemolysis	N/A	gamma	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	N/A	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	coccus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	coccus	coccus	bacillus	bacillus

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