Gordonia liuliyuniae

General Information

Gordonia liuliyuniae is a fascinating microorganism belonging to the genus Gordonia, which is known for its diverse metabolic capabilities and environmental resilience. This species was first isolated from a soil sample, highlighting its adaptability to terrestrial environments. One of the most intriguing aspects of G. liuliyuniae is its ability to degrade a variety of complex organic compounds, making it a valuable candidate for bioremediation efforts. G. liuliyuniae exhibits a unique cell wall structure that contributes to its robustness and resistance to harsh environmental conditions. This characteristic is particularly important for its survival and functionality in contaminated sites where it can break down pollutants that are otherwise difficult to manage. Another noteworthy feature of G. liuliyuniae is its potential in industrial applications. The organism's enzymatic machinery is capable of transforming various substrates into valuable bioproducts, such as biosurfactants and bioactive compounds. These bioproducts have significant applications in pharmaceuticals, agriculture, and the chemical industry. From a research perspective, G. liuliyuniae offers a wealth of opportunities to explore microbial ecology, metabolic pathways, and genetic engineering. Its ability to thrive in diverse environments and its metabolic versatility make it an excellent model organism for studying microbial adaptation and biotechnological innovation. In summary, Gordonia liuliyuniae stands out due to its biodegradation capabilities, industrial potential, and research value, making it a microorganism of considerable interest in both environmental and applied microbiology.

Gordonia liuliyuniae is a fascinating actinobacterial species that has garnered attention due to its unique metabolic capabilities and ecological significance. This microorganism is particularly notable for its ability to degrade a variety of complex organic compounds, including those found in industrial waste, making it a potential candidate for bioremediation applications. Its capacity to break down pollutants such as aromatic hydrocarbons and other xenobiotics highlights its value in environmental microbiology. One of the most interesting aspects of Gordonia liuliyuniae is its production of bioactive compounds, which may have implications in pharmaceutical research. The organism has been studied for its potential to produce antimicrobial agents, which could lead to the development of new antibiotics in an era where antibiotic resistance is a growing concern. This characteristic positions Gordonia liuliyuniae as a promising organism in the search for novel therapeutic compounds. Additionally, Gordonia liuliyuniae is known for its unique lipid composition, which includes mycolic acids that are characteristic of the genus Gordonia. This feature not only aids in its identification but also contributes to its resilience in harsh environments. The study of its lipid metabolism can provide insights into the evolutionary adaptations of actinobacteria and their ecological roles. Overall, Gordonia liuliyuniae stands out as a valuable organism for research in environmental science, biotechnology, and pharmacology, making it a subject of interest for scientists aiming to harness its capabilities for practical applications.

Taxonomy

Superkingdom: Bacteria

Phylum: Actinomycetota

Class: Actinomycetes

Order: Mycobacteriales

Family: Gordoniaceae

Genus: Gordonia

Species: Gordonia liuliyuniae

NCBI ID

2911517

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCA/021/739/025/GCA_021739025.1_ASM2173902v1

File for sequence-based predictions:
GCA_021739025.1_ASM2173902v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The microorganism Gordonia liuliyuniae is a member of the Gordonia genus, which is known for its environmental resilience and ability to degrade various organic compounds. Clinically, Gordonia liuliyuniae has been associated with infections in immunocompromised patients, particularly those with underlying conditions such as diabetes or malignancies. It has been isolated from various clinical specimens, including blood, respiratory secretions, and skin lesions, indicating its potential as an opportunistic pathogen. The organism's pathogenicity is attributed to its ability to form biofilms and its resistance to multiple antibiotics, which complicates treatment options. In terms of antimicrobial resistance, Gordonia liuliyuniae has shown resistance to several commonly used antibiotics, including beta-lactams and aminoglycosides, which poses a significant challenge in clinical settings. This resistance is often linked to the presence of specific resistance genes and efflux pumps that facilitate the organism's survival in hostile environments. Furthermore, the role of Gordonia liuliyuniae in human health is still being explored, with some studies suggesting potential applications in bioremediation and environmental microbiology. However, its clinical implications primarily revolve around its capacity to cause infections in vulnerable populations, necessitating further research to fully understand its pathogenic mechanisms and potential therapeutic targets. Overall, while Gordonia liuliyuniae is not a common pathogen, its emergence in clinical cases highlights the need for vigilance in monitoring and managing infections caused by this organism.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Gordonia liuliyuniae is a species of actinobacteria that is primarily associated with soil environments and wastewater treatment systems. This microorganism thrives in aerobic conditions and is often found in contaminated soils and industrial effluents, where it plays a significant role in the biodegradation of various organic pollutants, particularly aromatic compounds. Its ability to degrade complex hydrocarbons makes it a valuable organism in bioremediation efforts, contributing to the detoxification of polluted environments. In terms of ecological interactions, Gordonia liuliyuniae exhibits symbiotic relationships with other microorganisms, enhancing the overall efficiency of pollutant degradation in its habitat. It can also form biofilms, which are essential for its survival in aquatic environments and wastewater treatment plants, where it helps in the stabilization of microbial communities. Furthermore, this bacterium demonstrates remarkable environmental adaptability, allowing it to survive in varying conditions, including fluctuations in temperature and pH levels. Its presence in natural and engineered ecosystems underscores its importance in maintaining ecological balance and promoting the health of its surroundings.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Gordonia liuliyuniae has shown significant potential in various industrial applications, particularly in the fields of biotechnology, waste management, and bioremediation. This actinobacterium is known for its ability to degrade a wide range of environmental pollutants, making it a valuable asset in waste treatment processes. Its enzymatic capabilities allow it to break down complex organic compounds, including those found in industrial waste, thus contributing to effective biodegradation strategies. In the realm of biofuel production, Gordonia liuliyuniae has been explored for its ability to metabolize hydrocarbons, which can be harnessed in the production of biofuels from waste oils and other lipid-rich substrates. This process involves fermentation pathways that convert these substrates into usable energy forms, showcasing the organism's versatility in energy generation. Moreover, the organism's unique metabolic pathways have implications in pharmaceutical development, particularly in the synthesis of bioactive compounds. Its ability to produce specific enzymes can be utilized in enzyme production for various biotechnological applications, including drug formulation and development. Overall, Gordonia liuliyuniae stands out as a promising candidate for sustainable industrial practices, particularly in the areas of bioremediation, waste management, and biofuel production, highlighting its importance in addressing environmental challenges while contributing to economic growth.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 8

LLM predicted phenotypes: 5

Phenotype	High-quality annotation	google/gemini-flash-1.5	google/gemini-pro-1.5	anthropic/claude-3.5-sonnet	meta-llama/llama-3-70b-instruct:nitro	google/gemma-7b-it	meta-llama/llama-3-8b-instruct:nitro	anthropic/claude-3-haiku:beta	openchat/openchat-7b	mistralai/mixtral-8x7b-instruct:nitro	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	openai/gpt-4o	openai/gpt-4o	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	openai/gpt-4	openai/gpt-4	google/gemini-pro	google/gemini-pro	perplexity/llama-3-sonar-small-32k-chat	perplexity/llama-3-sonar-small-32k-chat	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	mistralai/mistral-7b-instruct	mistralai/mistral-7b-instruct
Motility	FALSE	false ✓	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Gram staining	gram stain positive	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain negative ✗	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain negative ✗	N/A	gram stain positive ✓	N/A	gram stain positive ✓
Aerophilicity	aerobic	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗
Biofilm formation	N/A	true	false	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Animal pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓
Biosafety level	biosafety level 1	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗
Health association	N/A	true	false	true	true	true	true	true	true	true	false	false	true	true	true	true	false	false	true	true	true	true	false	false	true	true	true	true
Host association	N/A	true	false	true	true	false	true	false	true	true	false	false	true	true	false	false	false	false	false	false	true	true	true	true	true	true	true	true
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	FALSE	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	N/A	gamma	N/A	N/A	N/A	alpha	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	N/A	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	coccus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus

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