Vibrio artabrorum

General Information

Vibrio artabrorum is a fascinating marine bacterium that belongs to the genus Vibrio. This organism is particularly interesting due to its bioluminescent properties, which make it a subject of significant research in marine biology and biotechnology. The ability to produce light is not only a captivating natural phenomenon but also has practical applications in scientific research, such as in the development of biosensors and in the study of marine ecosystems. Another notable feature of Vibrio artabrorum is its adaptation to saline environments. This bacterium thrives in marine habitats, which makes it an excellent model organism for studying osmoregulation and the mechanisms of salt tolerance. Understanding these processes can have broader implications for biotechnology, including the development of salt-tolerant crops and the bioremediation of saline environments. Moreover, Vibrio artabrorum is of interest due to its potential pathogenicity. While not as well-known as some of its relatives like Vibrio cholerae or Vibrio vulnificus, it is important to study its interactions with marine life and potential impacts on human health. This can provide insights into the evolution of virulence factors and the dynamics of marine microbial communities. In summary, Vibrio artabrorum stands out due to its bioluminescence, salt tolerance, and potential pathogenicity, making it a valuable organism for a variety of research fields, from marine biology to biotechnology and environmental science.

Vibrio artabrorum is a fascinating marine bacterium that has garnered attention due to its unique ecological niche and potential applications in biotechnology. This species is primarily found in coastal waters and is known for its ability to thrive in environments with varying salinity levels, making it an interesting subject for studies on osmoregulation and adaptation to changing environmental conditions. One of the most notable characteristics of Vibrio artabrorum is its production of extracellular enzymes, which play a crucial role in the degradation of organic matter in marine ecosystems. This enzymatic activity not only contributes to nutrient cycling but also positions Vibrio artabrorum as a potential candidate for bioremediation efforts, particularly in the breakdown of pollutants in aquatic environments. Additionally, this species has been studied for its antimicrobial properties, which may offer insights into the development of new antibiotics. The ability of Vibrio artabrorum to produce bioactive compounds could lead to valuable discoveries in the fight against antibiotic-resistant pathogens. Furthermore, Vibrio artabrorum is of interest in the field of marine microbiology due to its interactions with other marine organisms, including its role in the microbiome of marine animals. Understanding these interactions can provide deeper insights into marine ecology and the health of marine ecosystems. In summary, Vibrio artabrorum stands out for its ecological significance, potential biotechnological applications, and its role in marine microbial communities, making it a valuable organism for ongoing research in various scientific fields.

Taxonomy

Superkingdom: Bacteria

Phylum: Pseudomonadota

Class: Gammaproteobacteria

Order: Vibrionales

Family: Vibrionaceae

Genus: Vibrio

Species: Vibrio artabrorum

NCBI ID

446374

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCF/024/347/295/GCF_024347295.1_ASM2434729v1

File for sequence-based predictions:
GCF_024347295.1_ASM2434729v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The organism Vibrio artabrorum is a marine bacterium that has been associated with various clinical implications, particularly in the context of infections related to seafood consumption. It is known to inhabit coastal waters and can be found in association with marine organisms, which raises concerns about its potential role in foodborne illnesses. Clinical relevance is primarily linked to its ability to cause gastroenteritis in humans, particularly in individuals with compromised immune systems or underlying health conditions. Symptoms of infection may include diarrhea, abdominal cramps, and vomiting, which can lead to dehydration and more severe complications in vulnerable populations. In terms of pathogenicity, Vibrio artabrorum possesses virulence factors that enable it to adhere to and invade host tissues, contributing to its ability to cause disease. The organism's immune evasion strategies may include the production of biofilms and the secretion of factors that inhibit the host's immune response, allowing it to persist in the human body and complicate treatment. While there is limited information on antimicrobial resistance specific to Vibrio artabrorum, the broader genus Vibrio is known for its potential to develop resistance to commonly used antibiotics, which poses a challenge for effective treatment of infections. This highlights the importance of monitoring and understanding the resistance patterns of marine bacteria. Currently, there are no widely recognized medical applications such as probiotics, vaccines, or therapeutics specifically derived from Vibrio artabrorum. However, ongoing research into the genus may uncover potential benefits or applications in the future. Overall, the clinical implications of Vibrio artabrorum underscore the need for vigilance in seafood safety and public health measures to prevent infections associated with this organism.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Vibrio artabrorum is a marine bacterium commonly found in coastal waters and estuarine environments. This microorganism thrives in brackish waters, where the salinity levels fluctuate, allowing it to adapt to varying conditions. It is often associated with sediment-rich areas and mangrove ecosystems, where it plays a crucial role in nutrient cycling and organic matter decomposition. In these biomes, Vibrio artabrorum engages in symbiotic relationships with various marine organisms, including fish and invertebrates. It can be found in the gut microbiota of some marine species, aiding in digestion and enhancing nutrient absorption. This interaction not only benefits the host organisms but also contributes to the overall health of the marine ecosystem. Additionally, Vibrio artabrorum is known for its ability to thrive in hypoxic conditions, which are often present in areas with high organic load. Its metabolic versatility allows it to utilize a range of substrates, making it an important player in the biogeochemical cycles of coastal environments. The presence of this bacterium can indicate the health of the ecosystem, as it responds to changes in environmental conditions, such as pollution or nutrient influx. Overall, Vibrio artabrorum is a significant component of marine biomes, contributing to ecological balance and demonstrating the intricate relationships within these environments.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Vibrio artabrorum has shown potential in various industrial applications, particularly in the fields of biotechnology and waste management. This organism is known for its ability to thrive in marine environments, which makes it a candidate for applications in biodegradation of pollutants in aquatic systems. Its enzymatic activity can facilitate the breakdown of complex organic compounds, thus contributing to the detoxification of contaminated water bodies. In the realm of biofuel production, Vibrio artabrorum may play a role in the fermentation of organic materials, potentially leading to the generation of bioethanol or other biofuels. The organism's metabolic pathways can be harnessed to convert waste biomass into valuable energy sources, promoting sustainability. Additionally, there is interest in the pharmaceutical development sector, where Vibrio artabrorum could be explored for its production of bioactive compounds. These compounds may have antimicrobial properties, which can be beneficial in developing new drugs or enhancing existing treatments. Overall, the versatility of Vibrio artabrorum in various industrial processes, including fermentation, biodegradation, and enzyme production, highlights its potential as a valuable microorganism in addressing environmental and energy challenges.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 10

LLM predicted phenotypes: 3

Phenotype	High-quality annotation	openai/gpt-4o	openai/gpt-4o	google/gemini-flash-1.5	mistralai/mixtral-8x7b-instruct:nitro	perplexity/llama-3-sonar-small-32k-chat	mistralai/mistral-7b-instruct	meta-llama/llama-3-8b-instruct:nitro	openchat/openchat-7b	anthropic/claude-3.5-sonnet	anthropic/claude-3.5-sonnet	anthropic/claude-3-haiku:beta	anthropic/claude-3-haiku:beta	openai/gpt-4	openai/gpt-4	google/gemini-pro	google/gemini-pro	google/gemma-7b-it	google/gemma-7b-it	meta-llama/llama-3-70b-instruct:nitro	meta-llama/llama-3-70b-instruct:nitro	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	google/gemini-pro-1.5	google/gemini-pro-1.5	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b
Motility	TRUE	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓
Gram staining	gram stain negative	N/A	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓
Aerophilicity	aerobic	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	facultatively anaerobic ✗	N/A	N/A	N/A	N/A	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	N/A	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	N/A	N/A	N/A	N/A	N/A	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	true ✗	true ✗	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗
Biofilm formation	N/A	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Animal pathogenicity	TRUE	true ✓	true ✓	true ✓	false ✗	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓
Biosafety level	biosafety level 1	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗
Health association	N/A	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Host association	FALSE	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	N/A	beta	beta	beta	N/A	N/A	N/A	N/A	N/A	N/A	N/A	beta	beta	N/A	N/A	gamma	gamma	alpha	alpha	beta	beta	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	bacillus	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	spirillum ✗	spirillum ✗	bacillus ✓	bacillus ✓

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