Streptomyces cinereoruber

General Information

Streptomyces cinereoruber is a fascinating microorganism belonging to the genus Streptomyces, which is renowned for its prolific production of secondary metabolites. One of the most notable characteristics of S. cinereoruber is its ability to produce a wide array of antibiotics and other bioactive compounds. This makes it an invaluable resource in the field of pharmaceutical research and biotechnology. Streptomyces species are known for their complex life cycle, which includes the formation of a mycelium and spore chains, contributing to their unique colony morphology. The production of geosmin by S. cinereoruber is particularly interesting, as this compound is responsible for the earthy smell of soil, highlighting the organism's ecological role in soil environments. Moreover, S. cinereoruber has been studied for its potential in bioremediation due to its ability to degrade various organic pollutants. This capability underscores its environmental significance and potential applications in cleaning up contaminated sites. In summary, Streptomyces cinereoruber stands out due to its antibiotic production, distinctive earthy aroma, and bioremediation potential, making it a subject of considerable interest in both medical and environmental research.

Streptomyces cinereoruber is a fascinating actinobacterium known for its remarkable ability to produce a wide array of bioactive compounds, making it a valuable organism in pharmaceutical research. This species is particularly interesting due to its capacity to synthesize various antibiotics, including those effective against resistant strains of bacteria. The secondary metabolites produced by S. cinereoruber have garnered attention for their potential therapeutic applications, particularly in the fight against infectious diseases. One of the unique aspects of S. cinereoruber is its complex life cycle, which includes the formation of aerial hyphae and spores. This developmental process is not only crucial for its reproduction but also plays a significant role in its ecological interactions. The ability to thrive in diverse environments, from soil to decaying organic matter, highlights its ecological importance and adaptability. Moreover, S. cinereoruber has been studied for its role in soil health and nutrient cycling, contributing to the understanding of microbial communities in terrestrial ecosystems. Research into this organism can provide insights into natural product biosynthesis, microbial ecology, and the development of new antimicrobial agents. Its genetic tractability also makes it a model organism for studying gene regulation and secondary metabolite production, further enhancing its value in biotechnological applications.

Taxonomy

Superkingdom: Bacteria

Phylum: Actinomycetota

Class: Actinomycetes

Order: Kitasatosporales

Family: Streptomycetaceae

Genus: Streptomyces

Species: Streptomyces cinereoruber

NCBI ID

67260

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCF/009/299/385/GCF_009299385.1_ASM929938v1

File for sequence-based predictions:
GCF_009299385.1_ASM929938v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The organism Streptomyces cinereoruber is a member of the genus Streptomyces, which is known for its significant role in the production of antibiotics and other bioactive compounds. This species has been studied for its potential in antimicrobial resistance due to its ability to produce various secondary metabolites that can inhibit the growth of pathogenic bacteria. Clinical implications of Streptomyces cinereoruber include its use in the development of novel antibiotics, which is crucial in the fight against multi-drug resistant infections. In addition to its antibiotic properties, Streptomyces cinereoruber has been investigated for its role in human health as a potential probiotic. Probiotics are known to enhance the immune response and maintain gut health, although specific studies on this species are limited. The organism's interaction with the human body is primarily through its metabolites, which can modulate the immune system and potentially provide therapeutic benefits. However, the exact mechanisms of immune evasion or pathogenicity in humans are not well-documented, and further research is needed to fully understand its clinical relevance. Overall, while Streptomyces cinereoruber is not commonly associated with human infections, its contributions to antibiotic production and potential probiotic applications highlight its importance in medical applications and the ongoing search for new therapeutic agents.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Streptomyces cinereoruber is a species of bacterium that thrives primarily in soil ecosystems, particularly in nutrient-rich environments. This microorganism is commonly found in terrestrial biomes where it plays a crucial role in the decomposition of organic matter. Its ability to break down complex organic compounds contributes significantly to nutrient cycling within these ecosystems, making it an essential player in maintaining soil health and fertility. In addition to its role in decomposition, Streptomyces cinereoruber is known for its production of various antibiotics and other bioactive compounds, which can inhibit the growth of competing microorganisms. This characteristic not only aids in its survival but also influences the microbial community structure in its habitat, promoting a diverse range of interactions. Furthermore, this bacterium often engages in symbiotic relationships with plants, enhancing their growth by improving nutrient availability and protecting them from pathogens. Such interactions underscore its importance in agricultural ecosystems, where it can be utilized as a natural biocontrol agent and a biofertilizer. Overall, Streptomyces cinereoruber exemplifies the intricate connections within soil biomes, showcasing its adaptability and vital contributions to ecological balance.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Streptomyces cinereoruber is known for its significant contributions to various industrial applications, particularly in the fields of biotechnology, pharmaceutical development, and waste management. This actinobacterium is renowned for its ability to produce a wide range of bioactive compounds, including antibiotics, which are crucial in the pharmaceutical industry. For instance, it has been documented to produce compounds that exhibit antimicrobial properties, making it a valuable resource in the development of new antibiotics through fermentation processes. In the realm of biotechnology, Streptomyces cinereoruber is utilized for its enzymatic activities, particularly in the production of enzymes that can be applied in various industrial processes. These enzymes can facilitate biodegradation of complex organic materials, thus playing a role in waste management by breaking down pollutants and organic waste in environmental applications. Moreover, the organism's metabolic pathways are being explored for their potential in biofuel production. By harnessing its ability to degrade lignocellulosic biomass, Streptomyces cinereoruber can contribute to the development of sustainable biofuels through fermentation of plant materials, converting them into fermentable sugars that can be further processed into bioethanol. Overall, Streptomyces cinereoruber exemplifies the versatility of microorganisms in industrial applications, particularly through its roles in fermentation, enzyme production, and biodegradation, making it a key player in advancing sustainable practices across multiple industries.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 10

LLM predicted phenotypes: 3

Phenotype	High-quality annotation	google/palm-2-chat-bison-32k	anthropic/claude-3.5-sonnet	mistralai/mistral-7b-instruct	google/gemini-flash-1.5	google/gemini-flash-1.5	meta-llama/llama-3-70b-instruct:nitro	openai/gpt-3.5-turbo-0125	perplexity/llama-3-sonar-small-32k-chat	anthropic/claude-3-haiku:beta	openchat/openchat-7b	google/gemini-pro	mistralai/mixtral-8x7b-instruct:nitro	openai/gpt-4	openai/gpt-4	openai/gpt-4o	openai/gpt-4o	meta-llama/llama-3-8b-instruct:nitro	meta-llama/llama-3-8b-instruct:nitro	google/gemma-7b-it	google/gemma-7b-it	google/gemini-pro-1.5	google/gemini-pro-1.5	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct
Motility	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Gram staining	gram stain positive	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	N/A	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain negative ✗	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓
Aerophilicity	aerobic	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerotolerant ✗	aerotolerant ✗	N/A	N/A	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A
Extreme environment tolerance	FALSE	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	true ✗	true ✗	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗
Biofilm formation	N/A	true	true	false	true	true	true	true	true	true	false	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Animal pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Biosafety level	biosafety level 1	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 3 ✗	biosafety level 3 ✗
Health association	N/A	true	false	false	false	false	true	false	true	true	false	true	true	false	false	true	true	false	false	true	true	false	false	true	true	false	false
Host association	FALSE	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	true ✗	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	TRUE	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓
Hemolysis	N/A	N/A	N/A	N/A	gamma	gamma	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	alpha	alpha	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	tail	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗

Back to Search