Myroides pelagicus

General Information

Myroides pelagicus is a fascinating microorganism that belongs to the genus Myroides. This bacterium is particularly interesting due to its unique pigmentation and production of secondary metabolites. One of the most notable features of Myroides pelagicus is its ability to produce a yellow pigment, which is not only visually distinctive but also has potential applications in biotechnology and industrial processes. Another remarkable characteristic of Myroides pelagicus is its antibiotic resistance. This organism has been found to possess resistance to a wide range of antibiotics, making it a subject of interest in the study of antimicrobial resistance mechanisms. Understanding how Myroides pelagicus achieves this resistance can provide valuable insights into combating antibiotic-resistant pathogens. Additionally, Myroides pelagicus has been isolated from marine environments, which suggests that it may have unique adaptations to saline conditions. This makes it a valuable model for studying microbial life in extreme environments and could have implications for bioremediation efforts in marine ecosystems. In summary, Myroides pelagicus is a bacterium with several intriguing features, including its distinctive pigmentation, antibiotic resistance, and adaptation to marine environments. These characteristics make it a valuable organism for research in various fields, including microbiology, biotechnology, and environmental science.

Myroides pelagicus is a fascinating marine bacterium that has garnered attention due to its unique ecological niche and potential biotechnological applications. Isolated from seawater, this organism thrives in saline environments, showcasing its adaptability to extreme conditions. One of the most interesting aspects of M. pelagicus is its ability to produce a variety of bioactive compounds, which may have implications in pharmaceuticals and biotechnology. These compounds can exhibit antimicrobial properties, making M. pelagicus a candidate for further research in the development of new antibiotics. Additionally, M. pelagicus is known for its role in the marine ecosystem, contributing to nutrient cycling and organic matter degradation. This bacterium can utilize a range of organic substrates, which highlights its metabolic versatility. Such metabolic capabilities make it a valuable organism for studies on bioremediation and the degradation of pollutants in marine environments. Furthermore, the genomic analysis of M. pelagicus has revealed interesting insights into its evolutionary adaptations to marine life, including genes associated with osmotic stress response and nutrient acquisition. This makes it a significant model organism for understanding microbial life in oceanic ecosystems. Overall, Myroides pelagicus stands out not only for its ecological importance but also for its potential contributions to science and industry.

Taxonomy

Superkingdom: Bacteria

Phylum: Bacteroidota

Class: Flavobacteriia

Order: Flavobacteriales

Family: Flavobacteriaceae

Genus: Myroides

Species: Myroides pelagicus

NCBI ID

270914

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCF/009/711/055/GCF_009711055.1_ASM971105v1

File for sequence-based predictions:
GCF_009711055.1_ASM971105v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The bacterium Myroides pelagicus is a Gram-negative, non-fermentative rod that has been increasingly recognized in clinical settings, particularly in immunocompromised patients. Clinical implications of Myroides pelagicus include its association with infections such as pneumonia, bacteremia, and wound infections. This organism is often isolated from aquatic environments, which raises concerns about its potential as an opportunistic pathogen in humans, especially in those with underlying health conditions or compromised immune responses. One of the significant challenges posed by Myroides pelagicus is its antimicrobial resistance. It has demonstrated resistance to multiple classes of antibiotics, including beta-lactams and aminoglycosides, complicating treatment options for infections. This resistance is attributed to various mechanisms, including the production of beta-lactamases and efflux pumps, which can expel antibiotics from the bacterial cell, thereby reducing their efficacy. In terms of immune evasion, Myroides pelagicus can alter its surface structures and produce biofilms, which protect it from both the host's immune system and antibiotic treatment. This ability to form biofilms is particularly concerning in nosocomial settings, where it can adhere to medical devices and contribute to persistent infections. While Myroides pelagicus is not commonly associated with outbreaks, its presence in clinical specimens highlights the need for vigilance in monitoring and managing infections caused by this organism, especially in healthcare environments. Further research is necessary to fully understand its pathogenic mechanisms and to develop effective therapeutic strategies.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Myroides pelagicus is a marine bacterium commonly found in coastal waters and marine sediments. This organism thrives in environments characterized by high salinity and nutrient availability, often associated with organic matter decomposition. Its ecological niche is primarily within the benthic zone, where it plays a crucial role in nutrient cycling and organic matter breakdown, contributing to the overall health of the marine ecosystem. In terms of interactions, Myroides pelagicus is known to engage in symbiotic relationships with various marine organisms, including corals and sponges. These interactions can enhance nutrient availability for the host organisms, while the bacterium benefits from the organic compounds released by its hosts. Additionally, this bacterium exhibits remarkable environmental adaptability, allowing it to survive in fluctuating conditions typical of coastal environments, such as changes in temperature, salinity, and nutrient levels. Overall, Myroides pelagicus is an important player in the marine biome, contributing to the ecological balance and functioning of coastal ecosystems through its roles in decomposition, nutrient cycling, and symbiotic relationships.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Myroides pelagicus has shown potential in various industrial applications, particularly in the fields of biotechnology, waste management, and pharmaceutical development. This organism is known for its ability to thrive in marine environments, which opens up unique opportunities for its use in biodegradation processes, particularly in the breakdown of pollutants in aquatic systems. In the realm of biotechnology, Myroides pelagicus can be utilized in enzyme production, where it produces specific enzymes that can be harnessed for various industrial processes, including the degradation of complex organic materials. These enzymes can be particularly useful in the textile and paper industries for the treatment of effluents. Furthermore, its role in waste treatment is significant, as Myroides pelagicus can contribute to the bioremediation of contaminated water bodies, effectively breaking down harmful substances and improving water quality. This capability is crucial in addressing environmental pollution and promoting sustainable practices. In pharmaceutical development, the unique metabolic pathways of Myroides pelagicus may lead to the discovery of novel bioactive compounds, which could be explored for their therapeutic properties. The organism's adaptability and resilience in harsh marine environments make it a candidate for further research in drug discovery and development. Overall, Myroides pelagicus presents a promising avenue for innovation across multiple industries, leveraging its natural capabilities for sustainable solutions and biotechnological advancements.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 8

LLM predicted phenotypes: 5

Phenotype	High-quality annotation	anthropic/claude-3.5-sonnet	mistralai/mixtral-8x7b-instruct:nitro	google/gemini-flash-1.5	google/gemma-7b-it	google/gemini-pro-1.5	perplexity/llama-3-sonar-small-32k-chat	google/palm-2-chat-bison-32k	anthropic/claude-3-haiku:beta	mistralai/mistral-7b-instruct	meta-llama/llama-3-8b-instruct:nitro	meta-llama/llama-3-70b-instruct:nitro	openchat/openchat-7b	openai/gpt-4	openai/gpt-4	openai/gpt-4o	openai/gpt-4o	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct	google/gemini-pro	google/gemini-pro	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b
Motility	FALSE	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗
Gram staining	gram stain negative	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓
Aerophilicity	aerobic	aerobic ✓	facultatively anaerobic ✗	N/A	N/A	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A	N/A	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗
Biofilm formation	N/A	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	false	false	true	true	true	true	true	true
Animal pathogenicity	N/A	false	false	true	false	true	false	false	false	false	false	true	false	false	false	true	true	false	false	true	true	false	false	true	true
Biosafety level	biosafety level 1	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗
Health association	N/A	false	true	true	true	true	true	false	false	true	false	true	false	false	false	true	true	false	false	true	true	false	false	true	true
Host association	N/A	false	true	true	false	true	true	false	false	true	false	true	false	false	false	true	true	false	false	true	true	false	false	true	true
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	N/A	N/A	N/A	beta	alpha	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	bacillus	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	coccus ✗	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	coccus ✗	coccus ✗	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓

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