Streptomyces sioyaensis

General Information

Streptomyces sioyaensis is a fascinating microorganism belonging to the genus Streptomyces, which is renowned for its prolific production of bioactive compounds. One of the most notable characteristics of S. sioyaensis is its ability to produce the antibiotic siomycin. This compound has garnered significant interest due to its potential applications in treating bacterial infections and its unique mode of action. Streptomyces species are well-known for their complex secondary metabolism, and S. sioyaensis is no exception. The organism's genome encodes a variety of biosynthetic gene clusters that are responsible for the production of diverse secondary metabolites. These metabolites not only have antibiotic properties but also exhibit antifungal, antiviral, and anticancer activities, making S. sioyaensis a valuable resource for drug discovery and development. Another intriguing aspect of S. sioyaensis is its morphological differentiation. Like other Streptomyces species, it undergoes a complex life cycle that includes the formation of a mycelium and spore chains. This differentiation is tightly regulated and involves a sophisticated network of genetic and environmental signals. The ecological role of S. sioyaensis is also of interest. It is typically found in soil, where it plays a crucial role in decomposing organic matter and contributing to nutrient cycling. Its ability to produce a wide range of enzymes allows it to break down complex organic compounds, thus maintaining soil health and fertility. In summary, Streptomyces sioyaensis is a microorganism of significant scientific interest due to its antibiotic production, complex secondary metabolism, and ecological importance. Its potential applications in medicine and biotechnology continue to drive research into its biology and genetics.

Streptomyces sioyaensis is a fascinating actinobacterium known for its remarkable ability to produce a variety of bioactive compounds, making it a valuable organism in pharmaceutical research. This species is part of the larger genus Streptomyces, which is renowned for its prolific secondary metabolite production, including antibiotics, antifungals, and immunosuppressants. What sets S. sioyaensis apart is its unique biosynthetic pathways that allow it to synthesize compounds with potential therapeutic applications. One of the most interesting aspects of S. sioyaensis is its ability to thrive in diverse environments, particularly in soil and decaying organic matter, where it plays a crucial role in nutrient cycling. This ecological versatility not only contributes to its survival but also enhances its potential for discovering novel compounds that could lead to new drug development. Additionally, S. sioyaensis has been studied for its potential in biocontrol, as some of its metabolites exhibit antifungal and antibacterial properties that could be harnessed in agriculture to combat plant pathogens. This dual role as both a producer of valuable pharmaceuticals and a natural biocontrol agent underscores its significance in both medical and agricultural research. Overall, the unique metabolic capabilities and ecological roles of Streptomyces sioyaensis make it a subject of great interest for researchers looking to explore new avenues in drug discovery and sustainable agriculture.

Taxonomy

Superkingdom: Bacteria

Phylum: Actinomycetota

Class: Actinomycetes

Order: Kitasatosporales

Family: Streptomycetaceae

Genus: Streptomyces

Species: Streptomyces sioyaensis

NCBI ID

67364

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCF/004/122/735/GCF_004122735.1_ASM412273v1

File for sequence-based predictions:
GCF_004122735.1_ASM412273v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The organism Streptomyces sioyaensis is a member of the genus Streptomyces, which is known for its significant role in the production of antibiotics and other bioactive compounds. While S. sioyaensis itself has not been extensively studied in clinical settings, its relatives are well-documented for their antimicrobial properties. This genus is particularly important in the field of pharmaceutical microbiology, as it contributes to the discovery of new antibiotics that combat bacterial infections and antimicrobial resistance. In terms of pathogenicity, Streptomyces species are generally considered non-pathogenic to humans; however, they can occasionally be implicated in opportunistic infections, particularly in immunocompromised individuals. The potential for S. sioyaensis to produce secondary metabolites that may have therapeutic applications is an area of interest, especially in the development of new antibiotics. Moreover, the ability of Streptomyces species to produce a variety of enzymes and metabolites makes them valuable in biotechnology and agriculture, where they can be used as biocontrol agents or in the development of probiotics. The exploration of S. sioyaensis in these contexts could lead to advancements in both human health and agricultural practices. Overall, while Streptomyces sioyaensis may not have direct clinical implications documented in the literature, its potential contributions to antimicrobial development and biotechnological applications highlight its relevance in the ongoing fight against infectious diseases and antimicrobial resistance.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Streptomyces sioyaensis is a species of actinobacteria that is primarily found in soil ecosystems and is known for its role in the decomposition of organic matter. This microorganism thrives in nutrient-rich environments, particularly in areas with abundant decaying plant material, where it contributes significantly to the cycling of nutrients. Its presence is often associated with terrestrial biomes, especially in regions with a temperate climate where organic matter is plentiful. In these soil habitats, Streptomyces sioyaensis plays a crucial role in the breakdown of complex organic compounds, facilitating the release of essential nutrients back into the soil. This process not only supports plant growth but also enhances soil fertility, making it a vital component of the terrestrial ecosystem. Moreover, Streptomyces sioyaensis is known for its antibiotic production, which allows it to compete effectively with other microorganisms in its environment. This characteristic not only aids in its survival but also has implications for agricultural practices, as it can help suppress plant pathogens, thus promoting healthier crop yields. In summary, Streptomyces sioyaensis is predominantly found in soil ecosystems, where it contributes to nutrient cycling, supports plant health, and exhibits competitive interactions through its antibiotic production, making it an essential player in maintaining the balance of its ecological niche.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Streptomyces sioyaensis is known for its significant contributions to various industrial applications, particularly in the fields of biotechnology and pharmaceutical development. This actinobacterium is recognized for its ability to produce a range of bioactive compounds, including antibiotics and enzymes, which are crucial in the development of new therapeutic agents. For instance, the production of antibiotics through fermentation processes has been a hallmark of Streptomyces species, and Streptomyces sioyaensis is no exception, showcasing its potential in combating bacterial infections. In addition to its pharmaceutical applications, Streptomyces sioyaensis plays a role in waste management through its capacity for biodegradation. This organism can break down complex organic materials, making it valuable in the treatment of waste and the recycling of nutrients in various environments. Its enzymatic activity allows it to degrade pollutants, contributing to environmental sustainability. Furthermore, the potential of Streptomyces sioyaensis in biofuel production is being explored, particularly in the context of converting biomass into usable energy. The enzymes produced by this microorganism can facilitate the breakdown of lignocellulosic materials, enhancing the efficiency of biofuel generation processes. Overall, Streptomyces sioyaensis exemplifies the versatility of actinobacteria in industrial applications, particularly through its roles in fermentation, biodegradation, and enzyme production, making it a valuable organism in biotechnology and environmental management.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 9

LLM predicted phenotypes: 4

Phenotype	High-quality annotation	anthropic/claude-3.5-sonnet	google/palm-2-chat-bison-32k	google/gemini-flash-1.5	google/gemini-flash-1.5	meta-llama/llama-3-70b-instruct:nitro	meta-llama/llama-3-8b-instruct:nitro	anthropic/claude-3-haiku:beta	openchat/openchat-7b	mistralai/mixtral-8x7b-instruct:nitro	mistralai/mistral-7b-instruct	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	openai/gpt-4o	openai/gpt-4o	google/gemini-pro-1.5	google/gemini-pro-1.5	openai/gpt-4	openai/gpt-4	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	google/gemini-pro	google/gemini-pro	perplexity/llama-3-sonar-small-32k-chat	perplexity/llama-3-sonar-small-32k-chat	google/gemma-7b-it	google/gemma-7b-it	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct
Motility	N/A	false	false	false	false	false	false	false	false	false	true	false	false	false	false	false	false	false	false	false	false	false	false	true	true	true	true	false	false
Gram staining	gram stain positive	gram stain positive ✓	gram stain positive ✓	N/A	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain variable ✗	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓
Aerophilicity	aerobic	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	true ✗	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗
Biofilm formation	N/A	true	true	true	true	true	true	true	false	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Animal pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓
Biosafety level	biosafety level 1	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 3 ✗	biosafety level 3 ✗	biosafety level 2 ✗	biosafety level 2 ✗
Health association	N/A	false	true	false	false	false	true	true	false	true	false	false	false	false	false	true	true	true	true	true	true	true	true	true	true	true	true	false	false
Host association	FALSE	true ✗	false ✓	true ✗	true ✗	false ✓	true ✗	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓
Spore formation	TRUE	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓
Hemolysis	N/A	N/A	N/A	gamma	gamma	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	tail	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗	bacillus ✗

Back to Search