Microbacterium hydrothermale

General Information

Microbacterium hydrothermale is a fascinating microorganism that was first isolated from a hydrothermal vent, which is a unique and extreme environment. Hydrothermal vents are known for their high temperatures, high pressures, and chemically rich conditions, making them a hotspot for extremophiles. This particular species thrives in such harsh conditions, showcasing its remarkable adaptability and resilience. One of the most intriguing aspects of M. hydrothermale is its potential for biotechnological applications. The enzymes produced by this bacterium are likely to be thermostable, meaning they can function at high temperatures where most other enzymes would denature. This property makes them highly valuable for industrial processes that require robust enzymes capable of withstanding extreme conditions. Additionally, the metabolic pathways of M. hydrothermale are of significant interest. The bacterium's ability to survive and metabolize in the chemically diverse environment of hydrothermal vents suggests it may possess unique biochemical pathways that could be harnessed for bioremediation or the synthesis of novel compounds. From a research perspective, studying M. hydrothermale can provide insights into the mechanisms of life in extreme environments, contributing to our understanding of the limits of life on Earth and potentially informing the search for life on other planets. The extremophilic nature of this bacterium makes it a model organism for studying the adaptations required for survival in high-temperature, high-pressure environments. In summary, Microbacterium hydrothermale is not only a testament to the incredible diversity of life but also a promising candidate for various scientific and industrial applications due to its unique adaptations and biochemical capabilities.

Microbacterium hydrothermale is a fascinating species of bacteria that was first isolated from a hot spring in Japan. This organism thrives in extreme thermal environments, showcasing its remarkable adaptability to high temperatures, which can reach up to 70°C. Its ability to survive and proliferate in such conditions makes it a valuable subject for research into extremophiles and the mechanisms of thermal tolerance. One of the most interesting aspects of M. hydrothermale is its potential applications in biotechnology. The enzymes produced by this bacterium are of particular interest due to their stability and activity at elevated temperatures, which could be harnessed for industrial processes that require high-temperature conditions. This includes applications in bioremediation, where the breakdown of pollutants can be enhanced by thermophilic enzymes. Additionally, M. hydrothermale contributes to our understanding of microbial diversity in extreme environments. Its presence in geothermal ecosystems highlights the complex interactions within microbial communities and their roles in biogeochemical cycles. Studying this organism can provide insights into evolutionary adaptations and the potential for life in similar extreme conditions on other planets. Overall, Microbacterium hydrothermale stands out not only for its unique habitat but also for its implications in various fields, including environmental science, biotechnology, and astrobiology.

Taxonomy

Superkingdom: Bacteria

Phylum: Actinomycetota

Class: Actinomycetes

Order: Micrococcales

Family: Microbacteriaceae

Genus: Microbacterium

Species: Microbacterium hydrothermale

NCBI ID

857427

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCF/004/854/025/GCF_004854025.1_ASM485402v1

File for sequence-based predictions:
GCF_004854025.1_ASM485402v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The organism Microbacterium hydrothermale is a member of the genus Microbacterium, which is known for its diverse ecological roles and potential clinical implications. While specific studies on Microbacterium hydrothermale are limited, its close relatives have been associated with various clinical conditions. Microbacterium species are often found in environmental sources, including soil and water, and can occasionally be isolated from human clinical specimens, suggesting a potential role in infections in immunocompromised individuals. One of the notable aspects of Microbacterium hydrothermale is its potential for antimicrobial resistance, as some Microbacterium species have shown resistance to common antibiotics, which poses challenges in treatment. This resistance can complicate the management of infections, particularly in patients with underlying health conditions. In terms of immune evasion, Microbacterium species may possess mechanisms that allow them to survive in hostile environments, including the human body. These mechanisms can include biofilm formation and the production of protective extracellular polysaccharides, which may hinder the effectiveness of the immune response. While Microbacterium hydrothermale itself has not been directly linked to specific outbreaks or well-documented infections, its relatives have been implicated in opportunistic infections, particularly in patients with compromised immune systems. Further research is needed to fully elucidate the clinical significance of Microbacterium hydrothermale and its potential role in human health and disease.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Microbacterium hydrothermale is primarily associated with hydrothermal vent ecosystems, which are characterized by extreme conditions such as high temperatures, high pressure, and the presence of toxic chemicals. These environments are typically found on the ocean floor, where tectonic activity creates fissures that release mineral-rich, superheated water. In these unique habitats, M. hydrothermale thrives by utilizing the available chemical energy, particularly from sulfur compounds, to support its metabolic processes. In the context of its ecological role, Microbacterium hydrothermale contributes to the biogeochemical cycling of sulfur and other elements in these extreme environments. It plays a significant part in the breakdown of organic matter and the recycling of nutrients, which is crucial for sustaining the diverse microbial communities that inhabit hydrothermal vents. Additionally, this microorganism exhibits remarkable environmental adaptations that allow it to withstand the harsh conditions of its habitat, including high temperatures and varying pH levels. Its ability to form biofilms can also enhance its survival and interaction with other microorganisms, leading to potential symbiotic relationships that further enrich the ecosystem. Overall, Microbacterium hydrothermale exemplifies the resilience of life in extreme environments and highlights the intricate connections within marine ecosystems that are often overlooked.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Microbacterium hydrothermale has shown significant potential in various industrial applications. One of the primary areas of interest is in biotechnology, where Microbacterium hydrothermale is utilized for its unique metabolic capabilities. This organism is known to thrive in extreme environments, which makes it a candidate for enzyme production that can function under high temperatures and pressures, ideal for industrial processes that require robust enzymes. In the realm of waste management, Microbacterium hydrothermale has been studied for its ability to degrade complex organic compounds, making it useful in biodegradation processes. This characteristic can be harnessed to treat industrial effluents and reduce environmental pollution, contributing to more sustainable waste management practices. Furthermore, the organism's metabolic pathways can be explored for biofuel production. By utilizing its fermentation capabilities, Microbacterium hydrothermale can potentially convert biomass into biofuels, providing an alternative energy source that is more environmentally friendly compared to fossil fuels. In pharmaceutical development, the unique biochemical properties of Microbacterium hydrothermale may lead to the discovery of novel compounds with therapeutic potential. Its ability to produce specific metabolites can be investigated for their applications in drug formulation and development. Overall, Microbacterium hydrothermale represents a versatile microorganism with promising applications across multiple industries, particularly in fermentation, biodegradation, and enzyme production, making it a valuable asset in the pursuit of sustainable industrial practices.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 8

LLM predicted phenotypes: 5

Phenotype	High-quality annotation	google/gemini-pro-1.5	anthropic/claude-3.5-sonnet	google/palm-2-chat-bison-32k	google/gemini-flash-1.5	anthropic/claude-3-haiku:beta	perplexity/llama-3-sonar-small-32k-chat	mistralai/mixtral-8x7b-instruct:nitro	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	meta-llama/llama-3-8b-instruct:nitro	meta-llama/llama-3-8b-instruct:nitro	openai/gpt-4	openai/gpt-4	meta-llama/llama-3-70b-instruct:nitro	meta-llama/llama-3-70b-instruct:nitro	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	mistralai/mistral-7b-instruct	google/gemini-pro	google/gemini-pro	openai/gpt-4o	openai/gpt-4o	google/gemma-7b-it	google/gemma-7b-it	openchat/openchat-7b	openchat/openchat-7b	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct
Motility	N/A	true	false	false	true	false	true	false	false	false	true	true	false	false	true	true	false	false	false	false	false	false	false	true	true	false	false	false	false
Gram staining	gram stain positive	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain negative ✗	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain negative ✗	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain negative ✗
Aerophilicity	aerobic	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	facultatively anaerobic ✗	facultatively anaerobic ✗	aerotolerant ✗	aerotolerant ✗	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerotolerant ✗	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	true ✗	true ✗	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗
Biofilm formation	N/A	false	true	true	true	true	true	true	true	true	true	true	false	false	true	true	true	true	false	true	true	true	true	true	true	false	false	true	true
Animal pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Biosafety level	biosafety level 1	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	N/A	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓
Health association	N/A	false	false	true	false	true	true	false	false	false	false	false	false	false	true	true	false	false	false	true	true	false	false	true	true	false	false	true	true
Host association	N/A	false	false	false	false	false	true	false	false	false	false	false	false	false	true	true	false	false	true	false	false	false	false	false	false	false	false	false	false
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	N/A	N/A	N/A	N/A	gamma	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	bacillus	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	coccus ✗	coccus ✗	coccus ✗	coccus ✗

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