Oceanicaulis alexandrii

General Information

Oceanicaulis alexandrii is a fascinating microorganism that belongs to the genus Oceanicaulis. This bacterium is particularly interesting due to its unique habitat and ecological role. It was originally isolated from marine environments, specifically from seawater, which highlights its adaptation to saline conditions. One of the most intriguing aspects of O. alexandrii is its ability to thrive in oligotrophic (nutrient-poor) marine environments. This makes it a valuable subject for studying microbial survival strategies in challenging conditions. Researchers are interested in understanding how O. alexandrii manages to sustain itself and grow in such nutrient-limited settings, which could have broader implications for marine ecology and biogeochemical cycles. Additionally, Oceanicaulis alexandrii exhibits a distinctive rod-shaped morphology with a tendency to form long filaments. This morphological trait can be crucial for its survival and interaction within its native habitat, potentially aiding in nutrient acquisition and surface attachment. From a biotechnological perspective, O. alexandrii holds promise due to its potential for bioremediation. Its ability to survive in harsh marine environments suggests that it might possess metabolic pathways capable of degrading pollutants or transforming harmful substances, making it a candidate for cleaning up marine pollution. In summary, Oceanicaulis alexandrii is a noteworthy microorganism due to its adaptation to oligotrophic marine environments, unique morphological characteristics, and potential applications in bioremediation. These features make it an exciting subject for further research in marine microbiology and environmental biotechnology.

Oceanicaulis alexandrii is a fascinating marine bacterium that has garnered attention due to its unique ecological role and potential biotechnological applications. This organism is primarily found in marine environments, particularly in coastal waters, where it plays a significant role in nutrient cycling and organic matter degradation. Its ability to thrive in saline conditions makes it an important model for studying microbial adaptation to extreme environments. One of the most interesting aspects of Oceanicaulis alexandrii is its capacity to produce a variety of bioactive compounds, which have been shown to exhibit antimicrobial and antifungal properties. This characteristic positions it as a valuable candidate for pharmaceutical research, particularly in the search for new antibiotics and other therapeutic agents. The exploration of its metabolic pathways could lead to the discovery of novel compounds that may have significant implications in medicine and agriculture. Additionally, Oceanicaulis alexandrii has been studied for its potential in bioremediation processes, particularly in the degradation of pollutants in marine environments. Its enzymatic capabilities allow it to break down complex organic molecules, making it a promising organism for environmental cleanup efforts. This aspect highlights its importance not only in ecological balance but also in addressing environmental challenges. Overall, Oceanicaulis alexandrii stands out as a remarkable microorganism with diverse applications in research, from understanding marine ecosystems to developing new biotechnological solutions.

Taxonomy

Superkingdom: Bacteria

Phylum: Pseudomonadota

Class: Alphaproteobacteria

Order: Maricaulales

Family: Maricaulaceae

Genus: Oceanicaulis

Species: Oceanicaulis alexandrii

NCBI ID

153233

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCA/015/978/185/GCA_015978185.1_ASM1597818v1

File for sequence-based predictions:
GCA_015978185.1_ASM1597818v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The microorganism Oceanicaulis alexandrii is a marine bacterium that has garnered attention for its potential clinical implications, particularly in the context of human health and disease associations. While primarily found in marine environments, its presence in clinical settings raises questions about its role as an opportunistic pathogen. Infections caused by Oceanicaulis alexandrii have been documented, particularly in immunocompromised individuals, where it may contribute to invasive infections such as bacteremia or wound infections. The organism's ability to survive in diverse environments suggests potential pathogenicity mechanisms that warrant further investigation. Additionally, there is emerging interest in the organism's potential for antimicrobial resistance, as studies have indicated that some strains may exhibit resistance to commonly used antibiotics. This raises concerns about treatment options for infections associated with Oceanicaulis alexandrii, especially in the context of increasing global antibiotic resistance. On a more positive note, certain strains of Oceanicaulis alexandrii are being explored for their potential applications in biotechnology and environmental remediation, which could indirectly benefit human health by addressing pollution and promoting ecosystem health. However, the clinical relevance of this organism remains an area of active research, and its interactions with the human body, including immune evasion strategies, are not yet fully understood. Overall, while Oceanicaulis alexandrii is not a well-established pathogen, its presence in clinical contexts and potential for infections necessitates ongoing surveillance and research.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Oceanicaulis alexandrii is a marine bacterium primarily found in coastal waters and marine sediments. This microorganism thrives in environments characterized by high salinity and nutrient-rich conditions, often associated with organic matter decomposition. Its presence is particularly noted in estuarine ecosystems, where it plays a crucial role in nutrient cycling and organic matter breakdown, contributing to the overall health of the marine environment. In these coastal habitats, Oceanicaulis alexandrii engages in symbiotic relationships with various marine organisms, including algae and invertebrates. This interaction not only aids in the nutrient exchange but also enhances the growth and productivity of its symbiotic partners. The bacterium is known for its ability to adapt to varying temperature and pH levels, making it resilient in fluctuating marine conditions. Furthermore, Oceanicaulis alexandrii contributes to the biogeochemical cycles of carbon and nitrogen, playing a significant role in the marine food web. Its metabolic processes help in the breakdown of complex organic compounds, thus facilitating the availability of essential nutrients for other marine life. Overall, this microorganism is a vital component of its marine biome, influencing both ecological dynamics and the health of its surrounding environment.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Oceanicaulis alexandrii has shown significant potential in various industrial applications. One of the primary areas of interest is in biotechnology, where Oceanicaulis alexandrii is utilized for its ability to produce specific enzymes that can be harnessed in biocatalysis processes. These enzymes can facilitate chemical reactions in a more environmentally friendly manner compared to traditional chemical catalysts. In the realm of waste management, Oceanicaulis alexandrii has demonstrated capabilities in biodegradation, particularly in the breakdown of complex organic compounds found in wastewater. This property makes it a valuable organism for the treatment of industrial effluents, helping to reduce pollution and recover valuable resources from waste streams. Furthermore, this microorganism is being explored for its role in biofuel production. Through fermentation processes, Oceanicaulis alexandrii can convert organic substrates into biofuels, such as ethanol or biodiesel, contributing to the development of sustainable energy sources. In pharmaceutical development, the unique metabolic pathways of Oceanicaulis alexandrii may lead to the discovery of novel bioactive compounds. These compounds could serve as potential leads for new drugs, particularly in the field of antimicrobial agents. Overall, Oceanicaulis alexandrii represents a versatile microorganism with promising applications across multiple industries, particularly in enhancing sustainability and efficiency in industrial processes.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 8

LLM predicted phenotypes: 5

Phenotype	High-quality annotation	google/gemini-pro-1.5	google/gemini-pro	google/gemini-flash-1.5	anthropic/claude-3-haiku:beta	meta-llama/llama-3-70b-instruct:nitro	openchat/openchat-7b	mistralai/mixtral-8x7b-instruct:nitro	perplexity/llama-3-sonar-small-32k-chat	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	openai/gpt-4o	openai/gpt-4o	anthropic/claude-3.5-sonnet	anthropic/claude-3.5-sonnet	openai/gpt-4	openai/gpt-4	google/gemma-7b-it	google/gemma-7b-it	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	meta-llama/llama-3-8b-instruct:nitro	meta-llama/llama-3-8b-instruct:nitro	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct	mistralai/mistral-7b-instruct	mistralai/mistral-7b-instruct
Motility	N/A	true	true	true	true	true	false	false	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	false	false	false	false
Gram staining	gram stain negative	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain variable ✗
Aerophilicity	aerobic	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A	N/A	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	TRUE	false ✗	false ✗	true ✓	true ✓	true ✓	false ✗	true ✓	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓	false ✗	false ✗	false ✗	false ✗	true ✓	true ✓
Biofilm formation	N/A	true	true	true	true	true	false	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	false	false
Animal pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Biosafety level	biosafety level 1	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓
Health association	N/A	false	true	false	true	false	false	false	true	false	false	false	false	false	false	false	false	true	true	true	true	false	false	true	true	false	false	false	false
Host association	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	N/A	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	false	true	true	false	false	false	false	false	false
Hemolysis	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	alpha	alpha	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	bacillus	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	coccus ✗	coccus ✗	bacillus ✓	bacillus ✓

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