Vibrio sinaloensis

General Information

Vibrio sinaloensis is a fascinating microorganism that belongs to the genus Vibrio, which is well-known for its diverse and ecologically significant species. One of the most intriguing aspects of Vibrio sinaloensis is its adaptability to various marine environments, making it a subject of interest for marine microbiologists. This adaptability is crucial for understanding how marine bacteria can survive and thrive in different ecological niches. Another notable characteristic of Vibrio sinaloensis is its potential role in bioremediation. Like other Vibrio species, it may possess the ability to degrade complex organic compounds, which can be valuable for cleaning up polluted marine environments. This makes it a candidate for studies focused on environmental sustainability and pollution control. From a genetic perspective, Vibrio sinaloensis offers a rich field of study due to its genomic plasticity. The genetic diversity within the Vibrio genus is well-documented, and Vibrio sinaloensis is no exception. Researchers are particularly interested in its genetic mechanisms for adaptation and survival, which could provide insights into bacterial evolution and resilience. Moreover, Vibrio sinaloensis has been observed to interact with marine organisms, including fish and shellfish. These interactions can be symbiotic or pathogenic, making it an important organism for studies in marine biology and aquaculture. Understanding these interactions can help in managing fishery resources and preventing diseases in aquaculture settings. In summary, Vibrio sinaloensis is a microorganism of significant interest due to its environmental adaptability, potential for bioremediation, genomic diversity, and interactions with marine life. These characteristics make it a valuable subject for research in multiple scientific disciplines, including marine microbiology, environmental science, and aquaculture.

Vibrio sinaloensis is a fascinating marine bacterium that was first isolated from coastal waters in Sinaloa, Mexico. This organism is particularly interesting due to its halophilic nature, thriving in environments with high salt concentrations, which makes it a valuable model for studying salt tolerance mechanisms in bacteria. Its ability to adapt to extreme salinity conditions provides insights into the evolutionary processes that allow microorganisms to inhabit diverse ecological niches. One of the unique aspects of Vibrio sinaloensis is its potential role in the marine ecosystem, particularly in nutrient cycling and interactions with other marine organisms. It has been shown to possess enzymatic capabilities that may contribute to the degradation of organic matter, thus playing a crucial role in maintaining the health of marine environments. Additionally, this species has garnered attention for its biotechnological applications. Researchers are exploring its enzymes for use in various industrial processes, including bioremediation and the production of bioactive compounds. The study of Vibrio sinaloensis not only enhances our understanding of marine microbiology but also opens avenues for innovative applications in environmental and industrial biotechnology. Overall, Vibrio sinaloensis stands out as a significant organism for research due to its unique adaptations to saline environments, its ecological importance, and its potential for biotechnological advancements.

Taxonomy

Superkingdom: Bacteria

Phylum: Pseudomonadota

Class: Gammaproteobacteria

Order: Vibrionales

Family: Vibrionaceae

Genus: Vibrio

Species: Vibrio sinaloensis

NCBI ID

379097

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCA/023/195/835/GCA_023195835.1_ASM2319583v1

File for sequence-based predictions:
GCA_023195835.1_ASM2319583v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The bacterium Vibrio sinaloensis is a marine organism that has been associated with various clinical implications, particularly in relation to gastrointestinal infections. It is known to inhabit coastal waters and can be transmitted to humans through the consumption of contaminated seafood, particularly raw or undercooked shellfish. Infections caused by Vibrio sinaloensis can lead to symptoms such as diarrhea, abdominal cramps, nausea, and vomiting, which are characteristic of vibriosis. One of the significant concerns regarding Vibrio sinaloensis is its potential for pathogenicity, as it can produce toxins that contribute to its virulence. The organism's ability to thrive in saline environments and its association with marine life make it a notable pathogen in coastal regions, especially during warmer months when water temperatures rise. In terms of antimicrobial resistance, there is growing evidence that some strains of Vibrio species, including Vibrio sinaloensis, may exhibit resistance to commonly used antibiotics. This poses a challenge for treatment, as infections may not respond to standard antibiotic therapies, necessitating the need for careful monitoring and alternative treatment strategies. While Vibrio sinaloensis is primarily recognized for its role in foodborne illnesses, it also highlights the importance of public health measures in preventing outbreaks associated with seafood consumption. Awareness of the risks associated with this organism is crucial for both consumers and healthcare providers, particularly in regions where seafood is a dietary staple. Overall, the clinical relevance of Vibrio sinaloensis underscores the need for ongoing research into its pathogenic mechanisms, resistance patterns, and potential role in marine ecosystems, as well as its implications for human health.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Vibrio sinaloensis is a marine bacterium commonly associated with coastal ecosystems and brackish water environments. This microorganism thrives in areas where salinity levels fluctuate, such as estuaries and mangrove swamps, making it well-adapted to varying conditions. Its presence is often linked to sediment-rich waters, where it plays a crucial role in nutrient cycling and organic matter decomposition. In these marine biomes, Vibrio sinaloensis interacts with a variety of organisms, including fish and invertebrates, often forming symbiotic relationships that can enhance the health of its hosts. For instance, it may contribute to the digestion of organic materials in the gut of certain marine animals, showcasing its role as a beneficial microbe in the food web. Additionally, this bacterium is known for its ability to thrive in high-temperature environments, which are characteristic of certain tropical coastal regions. Its adaptability to temperature variations and salinity changes allows it to occupy a niche that few other microorganisms can, thus highlighting its ecological significance in maintaining the balance of these delicate ecosystems. Overall, Vibrio sinaloensis exemplifies the intricate relationships within marine biomes, where it not only survives but also contributes to the overall health and functionality of its environment.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Vibrio sinaloensis has shown potential in various industrial applications, particularly in the fields of biotechnology, waste management, and pharmaceutical development. This organism is known for its ability to thrive in marine environments, which can be harnessed for several beneficial processes. In biotechnology, Vibrio sinaloensis is involved in fermentation processes that can be utilized for the production of bioactive compounds. These compounds have potential applications in the development of natural preservatives and flavor enhancers in the food industry. In the realm of waste management, Vibrio sinaloensis has demonstrated capabilities in biodegradation, particularly in the breakdown of organic pollutants in marine environments. This property can be leveraged for the treatment of wastewater, helping to reduce the environmental impact of industrial effluents. Furthermore, the enzymatic activities of Vibrio sinaloensis can be explored for biofuel production. The organism's ability to metabolize various substrates can be harnessed to produce biofuels through fermentation processes, contributing to sustainable energy solutions. In pharmaceutical development, the bioactive compounds produced by Vibrio sinaloensis may have antimicrobial properties, making them candidates for the development of new antibiotics or other therapeutic agents. The exploration of these compounds could lead to significant advancements in the treatment of bacterial infections. Overall, Vibrio sinaloensis presents a versatile platform for various industrial applications, particularly in the areas of fermentation, biodegradation, and enzyme production, highlighting its importance in modern biotechnology and environmental management.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 8

LLM predicted phenotypes: 5

Phenotype	High-quality annotation	openai/gpt-4o	openai/gpt-4o	anthropic/claude-3.5-sonnet	google/gemini-flash-1.5	anthropic/claude-3-haiku:beta	meta-llama/llama-3-70b-instruct:nitro	google/gemma-7b-it	perplexity/llama-3-sonar-small-32k-chat	openchat/openchat-7b	mistralai/mistral-7b-instruct	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	google/gemini-pro-1.5	google/gemini-pro-1.5	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	openai/gpt-4	openai/gpt-4	mistralai/mixtral-8x7b-instruct:nitro	mistralai/mixtral-8x7b-instruct:nitro	google/gemini-pro	google/gemini-pro	meta-llama/llama-3-8b-instruct:nitro	meta-llama/llama-3-8b-instruct:nitro	microsoft/phi-3-mini-128k-instruct	microsoft/phi-3-mini-128k-instruct	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b
Motility	N/A	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Gram staining	gram stain negative	N/A	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓
Aerophilicity	aerobic	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	N/A	N/A	N/A	N/A	N/A	N/A	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	N/A	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	false ✓	false ✓	true ✗	false ✓	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗
Biofilm formation	N/A	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	false	false	true	true
Animal pathogenicity	TRUE	true ✓	true ✓	false ✗	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	false ✗	false ✗	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓
Biosafety level	biosafety level 1	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗
Health association	N/A	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	false	false	true	true
Host association	FALSE	true ✗	true ✗	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	N/A	beta	beta	N/A	beta	beta	beta	alpha	N/A	N/A	N/A	N/A	N/A	N/A	N/A	beta	beta	N/A	N/A	N/A	N/A	gamma	gamma	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	N/A	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	spirillum	spirillum	spirillum	spirillum

Back to Search