Paenarthrobacter aurescens

General Information

Paenarthrobacter aurescens is a fascinating microorganism that has garnered significant interest in the scientific community due to its remarkable metabolic versatility and potential applications in bioremediation. This bacterium is known for its ability to degrade a wide range of organic pollutants, including pesticides and herbicides, making it a valuable asset in efforts to clean up contaminated environments. One of the most intriguing aspects of P. aurescens is its genomic adaptability. The genome of P. aurescens TC1, a well-studied strain, reveals a large number of genes involved in the degradation of aromatic compounds, which are often found in industrial waste. This genetic makeup not only underscores the organism's potential in environmental biotechnology but also provides insights into the evolutionary mechanisms that enable bacteria to adapt to and thrive in polluted habitats. Additionally, P. aurescens exhibits a unique ability to produce secondary metabolites with potential antimicrobial properties. This characteristic opens up avenues for research into new antibiotics, which are critically needed in the face of rising antibiotic resistance. From a biotechnological perspective, the enzymatic toolkit of P. aurescens is of particular interest. The bacterium produces a variety of enzymes that can be harnessed for industrial applications, such as the breakdown of complex organic materials in waste treatment processes. In summary, Paenarthrobacter aurescens stands out due to its environmental resilience, metabolic diversity, and biotechnological potential, making it a subject of ongoing research with promising applications in both environmental and medical fields.

Paenarthrobacter aurescens is a fascinating bacterium that belongs to the family Micrococcaceae. This organism is particularly notable for its ability to degrade a variety of environmental pollutants, making it a valuable asset in bioremediation efforts. Its metabolic versatility allows it to utilize a range of carbon sources, including aromatic compounds, which are often found in contaminated environments. This characteristic positions P. aurescens as a potential candidate for the development of biotechnological applications aimed at cleaning up polluted sites, especially those contaminated with industrial waste or petroleum products. Another interesting aspect of P. aurescens is its ability to produce various enzymes, such as laccases and peroxidases, which are involved in the breakdown of complex organic molecules. These enzymes have significant implications for both environmental and industrial processes, including waste treatment and the production of biofuels. The study of these enzymatic pathways not only enhances our understanding of microbial metabolism but also opens avenues for innovative applications in green chemistry. Furthermore, P. aurescens has been isolated from diverse environments, including soil and plant rhizospheres, indicating its ecological adaptability and potential role in nutrient cycling. This adaptability underscores the importance of studying this organism in the context of ecosystem health and sustainability. Overall, Paenarthrobacter aurescens stands out as a unique microorganism with promising applications in environmental science and biotechnology.

Taxonomy

Superkingdom: Bacteria

Phylum: Actinomycetota

Class: Actinomycetes

Order: Micrococcales

Family: Micrococcaceae

Genus: Paenarthrobacter

Species: Paenarthrobacter aurescens

NCBI ID

43663

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCF/006/538/985/GCF_006538985.1_ASM653898v1

File for sequence-based predictions:
GCF_006538985.1_ASM653898v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The microorganism Paenarthrobacter aurescens is a Gram-positive bacterium that has garnered attention due to its potential clinical implications. While it is primarily known as a soil bacterium, its relevance in human health is becoming increasingly recognized. Clinical associations with Paenarthrobacter aurescens include its role in infections in immunocompromised patients, particularly those with underlying conditions such as cancer or diabetes. There have been documented cases of opportunistic infections linked to this organism, highlighting its pathogenic potential in vulnerable populations. One of the notable aspects of Paenarthrobacter aurescens is its ability to exhibit antimicrobial resistance, which poses challenges in treatment. Resistance mechanisms may include the production of enzymes that degrade antibiotics, making infections difficult to manage. This resistance underscores the importance of ongoing surveillance and research to understand its implications in clinical settings. In terms of immune evasion, Paenarthrobacter aurescens may employ strategies that allow it to persist in the host despite the immune response. This characteristic is particularly concerning in the context of nosocomial infections, where the bacterium can be transmitted in healthcare environments, leading to outbreaks. While research is still emerging, there is potential for Paenarthrobacter aurescens to be explored in medical applications, such as the development of probiotics or bioremediation strategies, given its environmental resilience. However, more studies are needed to fully elucidate its role in human health and disease, as well as its potential therapeutic applications.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Paenarthrobacter aurescens is a versatile microorganism commonly found in a variety of habitat types, particularly in soil and plant-associated environments. This bacterium thrives in nutrient-rich conditions, often associated with decaying organic matter, where it plays a crucial role in the decomposition process. Its ability to degrade complex organic compounds makes it an important player in nutrient cycling within these ecosystems. Soil Biomes: In terrestrial ecosystems, Paenarthrobacter aurescens is frequently isolated from agricultural soils, where it contributes to soil health by enhancing nutrient availability and promoting plant growth. Its presence is often linked to improved soil structure and fertility, making it beneficial for sustainable agricultural practices. Plant Interactions: This microorganism is also known to inhabit the rhizosphere, the region of soil directly influenced by root secretions and associated soil microorganisms. Here, it can engage in symbiotic relationships with plants, aiding in nutrient uptake and providing protection against pathogens. Such interactions underscore its role in promoting plant health and resilience. Environmental Adaptations: Paenarthrobacter aurescens exhibits remarkable adaptability to various environmental conditions, including fluctuations in moisture and nutrient levels. This adaptability allows it to thrive in diverse biomes, from arid regions to more temperate climates, showcasing its ecological versatility. Overall, Paenarthrobacter aurescens is a significant microorganism within its associated biomes, contributing to ecological balance, soil health, and plant vitality.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Paenarthrobacter aurescens has shown significant potential in various industrial applications. One of the most notable areas is in biotechnology, where Paenarthrobacter aurescens is utilized for its ability to degrade complex organic compounds, making it valuable in biodegradation processes. This capability is particularly useful in the treatment of contaminated soils and wastewater, where the organism can break down pollutants, thus contributing to effective waste management strategies. In the realm of biofuel production, Paenarthrobacter aurescens has been studied for its role in the conversion of biomass into biofuels. The organism can participate in fermentation processes that convert sugars derived from plant materials into ethanol, providing a sustainable alternative to fossil fuels. Additionally, Paenarthrobacter aurescens has potential applications in pharmaceutical development. Its enzymatic activities can be harnessed for the production of bioactive compounds, which may lead to the development of new drugs or therapeutic agents. The organism's ability to produce specific enzymes can facilitate enzyme production, which is crucial in various biochemical applications. Overall, Paenarthrobacter aurescens demonstrates versatility across multiple industries, particularly in biotechnology, waste management, biofuel production, and pharmaceutical development, showcasing its importance in sustainable industrial practices.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 9

LLM predicted phenotypes: 4

Phenotype	High-quality annotation	anthropic/claude-3.5-sonnet	google/gemini-flash-1.5	meta-llama/llama-3-70b-instruct:nitro	perplexity/llama-3-sonar-small-32k-chat	openchat/openchat-7b	microsoft/phi-3-mini-128k-instruct	mistralai/mixtral-8x7b-instruct:nitro	mistralai/mistral-7b-instruct	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	openai/gpt-4o	openai/gpt-4o	google/gemini-pro-1.5	google/gemini-pro-1.5	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	openai/gpt-4	openai/gpt-4	google/gemini-pro	google/gemini-pro	meta-llama/llama-3-8b-instruct:nitro	meta-llama/llama-3-8b-instruct:nitro	anthropic/claude-3-haiku:beta	anthropic/claude-3-haiku:beta	google/gemma-7b-it	google/gemma-7b-it	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b
Motility	N/A	false	true	true	true	false	false	false	true	true	true	true	true	true	true	false	false	true	true	false	false	true	true	false	false	true	true	false	false
Gram staining	gram stain positive	gram stain positive ✓	gram stain positive ✓	gram stain positive ✓	gram stain negative ✗	gram stain positive ✓	gram stain variable ✗	gram stain positive ✓	gram stain negative ✗	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain positive ✓	N/A	gram stain negative ✗	N/A	gram stain positive ✓	N/A	gram stain negative ✗	N/A	gram stain positive ✓
Aerophilicity	aerobic	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A	N/A	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	aerobic ✓	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	TRUE	true ✓	true ✓	true ✓	false ✗	false ✗	true ✓	false ✗	false ✗	false ✗	false ✗	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓	true ✓
Biofilm formation	N/A	true	true	true	true	false	true	true	true	true	true	true	true	true	true	true	true	false	false	true	true	true	true	true	true	true	true	true	true
Animal pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓
Biosafety level	biosafety level 1	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓
Health association	N/A	false	false	true	true	false	false	true	true	false	false	false	false	false	false	false	false	false	false	true	true	true	true	true	true	true	true	false	false
Host association	FALSE	false ✓	false ✓	true ✗	true ✗	false ✓	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓
Hemolysis	N/A	N/A	gamma	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	bacillus	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	coccus ✗	coccus ✗	coccus ✗	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	coccus ✗	coccus ✗	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓

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