Vibrio gazogenes

General Information

Vibrio gazogenes is a fascinating microorganism primarily due to its bioluminescent properties. This marine bacterium is capable of producing light through a biochemical reaction involving the enzyme luciferase. The bioluminescence of V. gazogenes is not only a captivating natural phenomenon but also holds significant potential for various scientific applications. For instance, it can be used as a reporter in molecular biology to monitor gene expression and cellular events in real-time. Another intriguing aspect of Vibrio gazogenes is its ability to thrive in saline environments, making it an important subject of study in marine microbiology. Its adaptability to different salt concentrations provides insights into osmoregulation mechanisms, which are crucial for understanding how marine organisms cope with changing environmental conditions. Moreover, V. gazogenes has been studied for its role in the marine nitrogen cycle. It participates in the breakdown of organic matter, contributing to nutrient cycling in ocean ecosystems. This makes it valuable for ecological studies aimed at understanding the dynamics of marine ecosystems and the impact of microbial activity on global biogeochemical cycles. In summary, Vibrio gazogenes is notable for its bioluminescence, adaptability to saline environments, and role in the marine nitrogen cycle, making it a microorganism of significant interest in both basic and applied research contexts.

Vibrio gazogenes is a fascinating marine bacterium that has garnered attention due to its unique metabolic capabilities and ecological significance. This organism is known for its ability to utilize a variety of organic compounds, making it an important player in the degradation of organic matter in marine environments. Its metabolic versatility allows it to thrive in diverse ecological niches, contributing to nutrient cycling in coastal ecosystems. One of the most interesting aspects of Vibrio gazogenes is its potential application in biotechnology. Research has indicated that this species may possess enzymes that can be harnessed for bioremediation purposes, particularly in the breakdown of pollutants in marine environments. This capability positions Vibrio gazogenes as a valuable organism for studies focused on environmental sustainability and the development of eco-friendly technologies. Additionally, Vibrio gazogenes is part of the larger Vibrio genus, which includes several species known for their pathogenic potential. However, Vibrio gazogenes itself is not associated with human disease, making it a safer subject for research compared to its more notorious relatives. This characteristic allows researchers to explore its biology and applications without the ethical and safety concerns associated with pathogenic organisms. In summary, Vibrio gazogenes stands out due to its metabolic diversity, potential biotechnological applications, and its non-pathogenic nature, making it a valuable organism for both ecological studies and biotechnological innovations.

Taxonomy

Superkingdom: Bacteria

Phylum: Pseudomonadota

Class: Gammaproteobacteria

Order: Vibrionales

Family: Vibrionaceae

Genus: Vibrio

Species: Vibrio gazogenes

NCBI ID

687

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCA/023/920/225/GCA_023920225.1_ASM2392022v1

File for sequence-based predictions:
GCA_023920225.1_ASM2392022v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The organism Vibrio gazogenes is a marine bacterium that has garnered attention due to its potential clinical implications, particularly in relation to infections and its role in human health. While it is primarily known for its presence in aquatic environments, its pathogenicity has been noted in certain contexts, especially in immunocompromised individuals. Infections caused by Vibrio gazogenes can lead to gastrointestinal disturbances, and in severe cases, it may contribute to wound infections following exposure to contaminated water. One of the significant concerns regarding Vibrio gazogenes is its potential for antimicrobial resistance. Strains of this organism have shown resistance to multiple classes of antibiotics, complicating treatment options for infections. This resistance is often attributed to the acquisition of resistance genes through horizontal gene transfer, which is a common trait among many Vibrio species. In terms of immune evasion, Vibrio gazogenes may employ various strategies to survive in hostile environments, including the production of biofilms and the secretion of virulence factors that can inhibit the host's immune response. While research on Vibrio gazogenes is still emerging, its presence in foodborne outbreaks and its association with marine environments underscore the need for continued surveillance and study. Understanding its pathogenic mechanisms and resistance profiles is crucial for developing effective public health strategies and therapeutic interventions.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Vibrio gazogenes is a marine bacterium commonly found in coastal waters and estuarine environments. This microorganism thrives in brackish waters, where it plays a significant role in the nutrient cycling of these ecosystems. Its presence is often associated with sediment-rich areas and mangrove ecosystems, where it contributes to the breakdown of organic matter, thus enhancing nutrient availability for other organisms in the food web. In terms of ecological interactions, Vibrio gazogenes exhibits symbiotic relationships with various marine organisms, including fish and invertebrates. These interactions can be beneficial, as the bacterium may help in the digestion of complex organic materials, providing essential nutrients to its hosts. Additionally, it can act as a pathogen under certain conditions, highlighting its dual role in the ecosystem. The adaptability of Vibrio gazogenes to varying salinity levels and temperatures allows it to occupy a wide range of marine habitats, from tidal pools to open ocean waters. This adaptability is crucial for its survival and proliferation, especially in environments that experience significant fluctuations in environmental conditions. Overall, Vibrio gazogenes is an important component of the marine microbiome, influencing both the health of its immediate environment and the broader ecological dynamics of coastal ecosystems.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Vibrio gazogenes has shown significant potential in various industrial applications. One of the primary areas of interest is in biotechnology, where Vibrio gazogenes is utilized for its ability to perform fermentation processes. This organism can convert organic substrates into valuable products, such as organic acids and alcohols, making it a candidate for bio-based chemical production. In the realm of waste management, Vibrio gazogenes has been studied for its capacity to degrade pollutants in aquatic environments. Its enzymatic activity allows it to break down complex organic compounds, contributing to biodegradation processes that help in the treatment of wastewater and the remediation of contaminated sites. Furthermore, Vibrio gazogenes has potential applications in biofuel production. By harnessing its metabolic pathways, researchers are exploring ways to optimize the organism for the production of bioethanol and other biofuels through fermentation of biomass feedstocks, which could lead to more sustainable energy sources. In pharmaceutical development, the unique metabolic capabilities of Vibrio gazogenes may be leveraged for the synthesis of bioactive compounds. Its ability to produce specific enzymes can be utilized in the development of novel drugs or therapeutic agents, showcasing its versatility in the pharmaceutical industry. Overall, Vibrio gazogenes represents a promising microorganism with diverse applications across biotechnology, waste management, biofuel production, and pharmaceuticals, driven by its metabolic versatility and enzymatic functions.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 8

LLM predicted phenotypes: 5

Phenotype	High-quality annotation	meta-llama/llama-3-70b-instruct:nitro	openai/gpt-4o	openai/gpt-4o	anthropic/claude-3-haiku:beta	google/gemma-7b-it	mistralai/mixtral-8x7b-instruct:nitro	google/gemini-pro	perplexity/llama-3-sonar-small-32k-chat	openchat/openchat-7b	microsoft/phi-3-mini-128k-instruct	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	google/gemini-pro-1.5	google/gemini-pro-1.5	meta-llama/llama-3-8b-instruct:nitro	meta-llama/llama-3-8b-instruct:nitro	openai/gpt-4	openai/gpt-4	google/gemini-flash-1.5	google/gemini-flash-1.5	anthropic/claude-3.5-sonnet	anthropic/claude-3.5-sonnet	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b	mistralai/mistral-7b-instruct	mistralai/mistral-7b-instruct
Motility	N/A	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Gram staining	gram stain negative	gram stain negative ✓	N/A	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓
Aerophilicity	aerobic	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	N/A	facultatively anaerobic ✗	N/A	N/A	N/A	N/A	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	N/A	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓
Biofilm formation	N/A	true	true	true	true	true	true	true	true	false	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Animal pathogenicity	FALSE	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	true ✗	true ✗	true ✗	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗
Biosafety level	biosafety level 1	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗
Health association	N/A	true	true	true	true	true	true	true	true	true	false	true	true	true	true	true	true	false	false	true	true	true	true	true	true	true	true	true	true
Host association	FALSE	true ✗	true ✗	true ✗	true ✗	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗
Plant pathogenicity	TRUE	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	true ✓	true ✓	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗	false ✗
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	N/A	beta	beta	beta	beta	alpha	N/A	gamma	N/A	N/A	N/A	N/A	N/A	N/A	N/A	beta	beta	N/A	N/A	beta	beta	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Cell shape	N/A	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	spirillum	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus	bacillus

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