Vibrio mediterranei

General Information

Vibrio mediterranei is a fascinating marine bacterium that has garnered attention for its unique ecological and biotechnological properties. This microorganism is primarily found in the Mediterranean Sea, which is reflected in its name. One of the most intriguing aspects of Vibrio mediterranei is its ability to produce bioluminescence, a trait that makes it particularly interesting for studies in marine biology and ecology. The bioluminescence is not only a captivating natural phenomenon but also has potential applications in biotechnology, such as in the development of biosensors and bioimaging tools. Another notable feature of Vibrio mediterranei is its role in the marine nitrogen cycle. It participates in the process of denitrification, which is crucial for maintaining the balance of nitrogen in marine ecosystems. This makes it an important organism for environmental microbiology research, particularly in the context of understanding and mitigating the impacts of nitrogen pollution. From a genomic perspective, Vibrio mediterranei has a relatively large and complex genome, which provides a rich source of genetic material for studying gene function and regulation. The genetic diversity within this species also makes it a valuable model for evolutionary studies, particularly in understanding how marine bacteria adapt to different environmental conditions. In summary, Vibrio mediterranei is a highly interesting and valuable microorganism for scientific research due to its bioluminescent properties, role in the nitrogen cycle, and genetic complexity. Its study not only enhances our understanding of marine ecosystems but also holds potential for various biotechnological applications.

Vibrio mediterranei is a fascinating marine bacterium that thrives in warm, coastal waters, particularly in the Mediterranean Sea. This organism is notable for its halophilic nature, meaning it requires a high salt concentration for optimal growth, which makes it an interesting subject for studies on osmoregulation and adaptation to saline environments. Its ability to survive in such conditions provides insights into the mechanisms of salt tolerance, which can have implications for biotechnology and environmental microbiology. One of the unique aspects of V. mediterranei is its potential role in the biodegradation of pollutants. Research has shown that this bacterium can utilize various hydrocarbons as carbon sources, making it a candidate for bioremediation efforts in marine environments contaminated with oil and other organic pollutants. This characteristic highlights its value in environmental science, particularly in developing sustainable methods for cleaning up marine ecosystems. Additionally, V. mediterranei is of interest due to its production of bioactive compounds. Some strains have been found to produce antimicrobial substances, which could lead to the discovery of new antibiotics or other therapeutic agents. This aspect of the organism opens avenues for pharmaceutical research, particularly in the search for novel compounds that can combat antibiotic-resistant bacteria. Furthermore, the study of V. mediterranei contributes to our understanding of marine microbial ecology. As a member of the Vibrionaceae family, it plays a role in the complex interactions within marine ecosystems, including nutrient cycling and symbiotic relationships with other marine organisms. This ecological perspective is crucial for comprehending the dynamics of marine environments and the impact of human activities on these systems. In summary, Vibrio mediterranei stands out for its halophilic characteristics, potential in bioremediation, production of bioactive compounds, and its ecological significance in marine environments, making it a valuable organism for both research and practical applications.

Taxonomy

Superkingdom: Bacteria

Phylum: Pseudomonadota

Class: Gammaproteobacteria

Order: Vibrionales

Family: Vibrionaceae

Genus: Vibrio

Species: Vibrio mediterranei

NCBI ID

689

Genome Info

FTP Path:
ftp.ncbi.nlm.nih.gov/genomes/all/GCF/003/726/935/GCF_003726935.1_ASM372693v1

File for sequence-based predictions:
GCF_003726935.1_ASM372693v1_genomic.fasta

Descriptions

Clinical Implications and Relevance

Source: gpt-4o-mini-2024-07-18

The organism Vibrio mediterranei is a halophilic bacterium that has been associated with various clinical implications, particularly in the context of infections and pathogenicity. It is primarily known for its role in causing gastroenteritis, which can occur after the consumption of contaminated seafood, particularly in coastal regions where this organism is prevalent. The symptoms of gastroenteritis can include diarrhea, abdominal cramps, and vomiting, which may lead to dehydration, especially in vulnerable populations such as the elderly or immunocompromised individuals. In addition to gastroenteritis, Vibrio mediterranei has been implicated in wound infections, particularly in individuals with open wounds exposed to seawater. This can lead to serious complications, including necrotizing fasciitis, which requires prompt medical attention and intervention. One of the notable aspects of Vibrio mediterranei is its potential for antimicrobial resistance. Strains of this organism have shown resistance to multiple antibiotics, which complicates treatment options for infected patients. This resistance is often attributed to the acquisition of resistance genes through horizontal gene transfer, making it crucial for healthcare providers to be aware of local resistance patterns when treating infections caused by this organism. Furthermore, Vibrio mediterranei has been studied for its potential applications in biotechnology and environmental monitoring due to its ability to thrive in saline environments. However, its clinical relevance primarily lies in its association with foodborne illnesses and wound infections, highlighting the need for continued surveillance and research to better understand its pathogenic mechanisms and to develop effective prevention strategies.

Habitat and Ecological Niches

Source: gpt-4o-mini-2024-07-18

Vibrio mediterranei is a halophilic bacterium commonly found in marine environments and brackish waters. This microorganism thrives in areas with elevated salinity, often associated with coastal regions, estuaries, and salt marshes. Its presence is particularly noted in the Mediterranean Sea, where it plays a significant role in the local ecosystem. In these marine habitats, Vibrio mediterranei contributes to the nutrient cycling process, particularly in the breakdown of organic matter. It is known to interact with various marine organisms, including fish and invertebrates, often forming symbiotic relationships that can enhance the health and growth of its hosts. Additionally, this bacterium is capable of adapting to varying salinity levels, which allows it to occupy a range of ecological niches within its preferred environments. Its ability to thrive in both high salinity and lower salinity conditions makes it a versatile organism in the face of changing environmental factors. Overall, Vibrio mediterranei is an important component of the marine microbiome, influencing both the biological and chemical dynamics of its habitat.

Industrial Application

Source: gpt-4o-mini-2024-07-18

The microorganism Vibrio mediterranei has shown significant potential in various industrial applications. One of the most notable areas is in biotechnology, where Vibrio mediterranei is utilized for its ability to produce enzymes that can be harnessed in biocatalysis processes. These enzymes are particularly valuable in the synthesis of pharmaceuticals and fine chemicals, where they can facilitate reactions under mild conditions, reducing the need for harsh chemicals. In the realm of waste management, Vibrio mediterranei has demonstrated capabilities in biodegradation processes, particularly in the breakdown of organic pollutants in marine environments. This characteristic makes it a candidate for bioremediation efforts aimed at cleaning up oil spills and other contaminants in coastal areas. Furthermore, Vibrio mediterranei has been explored for its potential in biofuel production. Its metabolic pathways can be leveraged to convert organic substrates into biofuels through fermentation, providing a sustainable alternative to fossil fuels. The organism's ability to thrive in saline conditions also opens avenues for utilizing marine biomass in biofuel generation. In pharmaceutical development, the unique metabolic properties of Vibrio mediterranei can be exploited for the production of bioactive compounds, which may lead to the discovery of new drugs or therapeutic agents. The organism's natural habitat and adaptability contribute to its potential in producing novel secondary metabolites that could have significant medicinal value. Overall, Vibrio mediterranei presents a multifaceted opportunity across various industries, particularly in biotechnology, waste management, biofuel production, and pharmaceutical development, making it a valuable organism for future research and application.

Phenotypes and Predictions

The table shows the phenotypes and predictions. Cell colors indicate the class of the value. When literature-based data is available, a checkmark (✓) indicates a correct prediction, while an ✗ indicates an incorrect prediction.

Literature-based phenotypes: 9

LLM predicted phenotypes: 4

Phenotype	High-quality annotation	openai/gpt-4o	openai/gpt-4o	anthropic/claude-3.5-sonnet	mistralai/mixtral-8x7b-instruct:nitro	google/gemini-pro	meta-llama/llama-3-70b-instruct:nitro	perplexity/llama-3-sonar-small-32k-chat	openchat/openchat-7b	microsoft/phi-3-mini-128k-instruct	mistralai/mistral-7b-instruct	openai/gpt-3.5-turbo-0125	openai/gpt-3.5-turbo-0125	meta-llama/llama-3-8b-instruct:nitro	meta-llama/llama-3-8b-instruct:nitro	google/palm-2-chat-bison-32k	google/palm-2-chat-bison-32k	openai/gpt-4	openai/gpt-4	google/gemini-flash-1.5	google/gemini-flash-1.5	anthropic/claude-3-haiku:beta	anthropic/claude-3-haiku:beta	google/gemini-pro-1.5	google/gemini-pro-1.5	microsoft/wizardlm-2-8x22b	microsoft/wizardlm-2-8x22b
Motility	N/A	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Gram staining	gram stain negative	N/A	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓	N/A	gram stain negative ✓
Aerophilicity	aerobic	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	facultatively anaerobic ✗	N/A	N/A	N/A	N/A	N/A	N/A	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	N/A	N/A	N/A	facultatively anaerobic ✗	facultatively anaerobic ✗	N/A	N/A	N/A	N/A	N/A	N/A	N/A	N/A
Extreme environment tolerance	FALSE	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	false ✓	false ✓	false ✓	true ✗	false ✓	false ✓	true ✗	true ✗	false ✓	false ✓	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓
Biofilm formation	N/A	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Animal pathogenicity	TRUE	true ✓	true ✓	true ✓	false ✗	true ✓	false ✗	true ✓	true ✓	false ✗	true ✓	false ✗	false ✗	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓	true ✓	true ✓	false ✗	false ✗	true ✓	true ✓
Biosafety level	biosafety level 1	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 2 ✗	biosafety level 1 ✓	biosafety level 1 ✓	biosafety level 2 ✗	biosafety level 2 ✗
Health association	N/A	true	true	true	true	true	true	true	true	false	true	false	false	true	true	true	true	true	true	true	true	true	true	true	true	true	true
Host association	FALSE	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	true ✗	false ✓	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗	true ✗	true ✗	false ✓	false ✓	true ✗	true ✗
Plant pathogenicity	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Spore formation	FALSE	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓	false ✓
Hemolysis	N/A	beta	beta	beta	N/A	gamma	N/A	N/A	N/A	N/A	N/A	N/A	N/A	beta	beta	beta	beta	N/A	N/A	beta	beta	beta	beta	N/A	N/A	N/A	N/A
Cell shape	bacillus	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓	bacillus ✓

Back to Search